RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 CARMIL1Q5VZK9 1371 aa15.48■□□□□ 0.07
LSS-208ENST00000474319 KIF21BO75037 1637 aa15.46■□□□□ 0.06
LSS-208ENST00000474319 TOP2BQ02880 1626 aa15.44■□□□□ 0.06
LSS-208ENST00000474319 IGF1RP08069 1367 aa15.44■□□□□ 0.06
LSS-208ENST00000474319 TRIM52Q96A61 297 aa15.43■□□□□ 0.06
LSS-208ENST00000474319 FKBP8Q14318 412 aa15.39■□□□□ 0.05
LSS-208ENST00000474319 AQRO60306 1485 aaKnown RBP eCLIP15.38■□□□□ 0.055e-9■■■■■ 29.1
LSS-208ENST00000474319 TOPBP1Q92547 1522 aa15.38■□□□□ 0.05
LSS-208ENST00000474319 CNGB1Q14028 1251 aaPredicted RBP15.38■□□□□ 0.05
LSS-208ENST00000474319 POLA1P09884 1462 aaPredicted RBP15.38■□□□□ 0.05
LSS-208ENST00000474319 ARAP1Q96P48 1450 aa15.37■□□□□ 0.05
LSS-208ENST00000474319 CHMP7Q8WUX9 453 aaPredicted RBP15.36■□□□□ 0.05
LSS-208ENST00000474319 URB2Q14146 1524 aaKnown RBP15.35■□□□□ 0.05
LSS-208ENST00000474319 CCNB3Q8WWL7 1395 aa15.34■□□□□ 0.05
LSS-208ENST00000474319 RAB3GAP2Q9H2M9 1393 aa15.32■□□□□ 0.04
LSS-208ENST00000474319 TSHZ2Q9NRE2 1034 aa15.31■□□□□ 0.04
LSS-208ENST00000474319 IRX6P78412 446 aaPredicted RBP15.31■□□□□ 0.04
LSS-208ENST00000474319 PRXQ9BXM0 1461 aa15.25■□□□□ 0.03
LSS-208ENST00000474319 FHOD3Q2V2M9 1422 aa15.25■□□□□ 0.03
LSS-208ENST00000474319 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
LSS-208ENST00000474319 GAPVD1Q14C86 1478 aa15.24■□□□□ 0.03
LSS-208ENST00000474319 SENP3-EIF4A1A0A087X0R7 540 aa15.24■□□□□ 0.03
LSS-208ENST00000474319 BIVM-ERCC5R4GMW8 1640 aa15.23■□□□□ 0.03
LSS-208ENST00000474319 LAMC3Q9Y6N6 1575 aa15.23■□□□□ 0.03
LSS-208ENST00000474319 NEFLP07196 543 aa15.23■□□□□ 0.03
LSS-208ENST00000474319 DNMBPQ6XZF7 1577 aa15.22■□□□□ 0.03
LSS-208ENST00000474319 ZNF608Q9ULD9 1512 aaPredicted RBP15.21■□□□□ 0.03
LSS-208ENST00000474319 KIF21AQ7Z4S6 1674 aa15.2■□□□□ 0.02
LSS-208ENST00000474319 CLSPNQ9HAW4 1339 aa15.19■□□□□ 0.02
LSS-208ENST00000474319 CHIC2Q9UKJ5 165 aa15.19■□□□□ 0.02
LSS-208ENST00000474319 ARHGAP35Q9NRY4 1499 aa15.19■□□□□ 0.02
LSS-208ENST00000474319 ANP32CO43423 234 aa15.18■□□□□ 0.02
LSS-208ENST00000474319 PHLDB1Q86UU1 1377 aa15.17■□□□□ 0.02
LSS-208ENST00000474319 MRC2Q9UBG0 1479 aa15.16■□□□□ 0.02
LSS-208ENST00000474319 RRBP1Q9P2E9 1410 aaKnown RBP15.13■□□□□ 0.01
LSS-208ENST00000474319 SETD5Q9C0A6 1442 aa15.12■□□□□ 0.01
LSS-208ENST00000474319 ABCA10Q8WWZ4 1543 aa15.12■□□□□ 0.01
LSS-208ENST00000474319 POLR3GLQ9BT43 218 aa15.12■□□□□ 0.01
LSS-208ENST00000474319 HNRNPUQ00839 825 aaKnown RBP eCLIP15.11■□□□□ 0.01
LSS-208ENST00000474319 ZNF777Q9ULD5 760 aaPredicted RBP15.11■□□□□ 0.01
LSS-208ENST00000474319 RRP7BPQ9NSQ0 103 aa15.11■□□□□ 0.01
LSS-208ENST00000474319 WDR97A6NE52 1622 aa15.1■□□□□ 0.01
LSS-208ENST00000474319 TONSLQ96HA7 1378 aa15.08■□□□□ 0
LSS-208ENST00000474319 FOXD1Q16676 465 aa15.07■□□□□ 0
LSS-208ENST00000474319 MTUS2Q5JR59 1369 aa15.07■□□□□ 0
LSS-208ENST00000474319 ANP32EQ9BTT0 268 aa15.06■□□□□ 0
LSS-208ENST00000474319 PPP1R15AO75807 674 aaPredicted RBP15.05■□□□□ -0
LSS-208ENST00000474319 MAPKBP1O60336 1514 aa15.04■□□□□ -0
LSS-208ENST00000474319 ERICH3Q5RHP9 1530 aa15.04■□□□□ -0
LSS-208ENST00000474319 RBM19Q9Y4C8 960 aaKnown RBP15.04■□□□□ -0
LSS-208ENST00000474319 SNAPC4Q5SXM2 1469 aa15.02■□□□□ -0
LSS-208ENST00000474319 FAM9BQ8IZU0 186 aa15.02■□□□□ -0
LSS-208ENST00000474319 JPH4Q96JJ6 628 aa15.02□□□□□ -0.01
LSS-208ENST00000474319 PRKCSHP14314 528 aaPredicted RBP14.99□□□□□ -0.01
LSS-208ENST00000474319 PRDM2Q13029 1718 aa14.99□□□□□ -0.01
LSS-208ENST00000474319 GRIN2BQ13224 1484 aa14.99□□□□□ -0.01
LSS-208ENST00000474319 ZNF326Q5BKZ1 582 aaKnown RBP14.99□□□□□ -0.01
LSS-208ENST00000474319 LRRC9Q6ZRR7 1453 aa14.99□□□□□ -0.01
LSS-208ENST00000474319 IFT140Q96RY7 1462 aa14.96□□□□□ -0.01
LSS-208ENST00000474319 FHAD1B1AJZ9 1412 aa14.96□□□□□ -0.01
LSS-208ENST00000474319 CCDC184Q52MB2 194 aa14.96□□□□□ -0.02
LSS-208ENST00000474319 ERICH6Q7L0X2 663 aa14.93□□□□□ -0.02
LSS-208ENST00000474319 TIAM1Q13009 1591 aa14.93□□□□□ -0.02
LSS-208ENST00000474319 HSPA5P11021 654 aaKnown RBP14.91□□□□□ -0.02
LSS-208ENST00000474319 MYT1LQ9UL68 1186 aa14.91□□□□□ -0.02
LSS-208ENST00000474319 B4GALNT3Q6L9W6 998 aa14.89□□□□□ -0.03
LSS-208ENST00000474319 FMN1Q68DA7 1419 aa14.87□□□□□ -0.03
LSS-208ENST00000474319 TARBP1Q13395 1621 aaKnown RBP14.86□□□□□ -0.03
LSS-208ENST00000474319 PCF11O94913 1555 aaKnown RBP14.86□□□□□ -0.03
LSS-208ENST00000474319 ZNF644Q9H582 1327 aaPredicted RBP14.86□□□□□ -0.03
LSS-208ENST00000474319 MRS2Q9HD23 443 aa14.86□□□□□ -0.03
LSS-208ENST00000474319 CDK11AQ9UQ88 783 aaPredicted RBP14.86□□□□□ -0.03
LSS-208ENST00000474319 PTPRKQ15262 1439 aa14.85□□□□□ -0.03
LSS-208ENST00000474319 CCER2I3L3R5 266 aa14.85□□□□□ -0.03
LSS-208ENST00000474319 MSH5O43196 834 aa14.84□□□□□ -0.03
LSS-208ENST00000474319 BCL11AQ9H165 835 aa14.83□□□□□ -0.04
LSS-208ENST00000474319 WASHC2AQ641Q2 1341 aa14.83□□□□□ -0.04
LSS-208ENST00000474319 CCDC18Q5T9S5 1454 aa14.83□□□□□ -0.04
LSS-208ENST00000474319 WDR62O43379 1518 aa14.83□□□□□ -0.04
LSS-208ENST00000474319 PLEKHD1A6NEE1 506 aa14.83□□□□□ -0.04
LSS-208ENST00000474319 SALL2Q9Y467 1007 aaPredicted RBP14.83□□□□□ -0.04
LSS-208ENST00000474319 C11orf95C9JLR9 678 aaPredicted RBP14.82□□□□□ -0.04
LSS-208ENST00000474319 ABCA5Q8WWZ7 1642 aa14.82□□□□□ -0.04
LSS-208ENST00000474319 L3MBTL2Q969R5 705 aa14.81□□□□□ -0.04
LSS-208ENST00000474319 EIF4G3O43432 1585 aaKnown RBP14.81□□□□□ -0.04
LSS-208ENST00000474319 GRIN2AQ12879 1464 aa14.81□□□□□ -0.04
LSS-208ENST00000474319 EIF4G2P78344 907 aaKnown RBP eCLIP14.8□□□□□ -0.04
LSS-208ENST00000474319 CFDP1Q9UEE9 299 aaPredicted RBP14.8□□□□□ -0.04
LSS-208ENST00000474319 FGD6Q6ZV73 1430 aa14.8□□□□□ -0.04
LSS-208ENST00000474319 CUL7Q14999 1698 aa14.8□□□□□ -0.04
LSS-208ENST00000474319 CDK13Q14004 1512 aaKnown RBP14.79□□□□□ -0.04
LSS-208ENST00000474319 PLB1Q6P1J6 1458 aa14.77□□□□□ -0.05
LSS-208ENST00000474319 NBR1Q14596 966 aa14.77□□□□□ -0.05
LSS-208ENST00000474319 CASKIN1Q8WXD9 1431 aa14.76□□□□□ -0.05
LSS-208ENST00000474319 CARMIL2Q6F5E8 1435 aa14.76□□□□□ -0.05
LSS-208ENST00000474319 PRG4Q92954 1404 aaPredicted RBP14.76□□□□□ -0.05
LSS-208ENST00000474319 IQGAP2Q13576 1575 aa14.75□□□□□ -0.05
LSS-208ENST00000474319 MPHOSPH9Q99550 1183 aa14.75□□□□□ -0.05
LSS-208ENST00000474319 TIMELESSQ9UNS1 1208 aa14.75□□□□□ -0.05
LSS-208ENST00000474319 SYNJ2O15056 1496 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms