RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 RUSC2Q8N2Y8 1516 aa17.39■□□□□ 0.37
MCF2L-223ENST00000473345 ADCY10Q96PN6 1610 aa17.32■□□□□ 0.36
MCF2L-223ENST00000473345 ABCC10Q5T3U5 1492 aa17.31■□□□□ 0.36
MCF2L-223ENST00000473345 IGF1RP08069 1367 aa17.28■□□□□ 0.36
MCF2L-223ENST00000473345 DIP2BQ9P265 1576 aa17.28■□□□□ 0.36
MCF2L-223ENST00000473345 FAM69CQ0P6D2 419 aa17.28■□□□□ 0.36
MCF2L-223ENST00000473345 MAPKBP1O60336 1514 aa17.26■□□□□ 0.35
MCF2L-223ENST00000473345 KIAA0586Q9BVV6 1533 aa17.23■□□□□ 0.35
MCF2L-223ENST00000473345 KDM4FA0A1W2PPD8 638 aa17.2■□□□□ 0.34
MCF2L-223ENST00000473345 KIF27Q86VH2 1401 aa17.15■□□□□ 0.34
MCF2L-223ENST00000473345 NPM1P06748 294 aaKnown RBP eCLIP17.14■□□□□ 0.33
MCF2L-223ENST00000473345 CUL7Q14999 1698 aa17.13■□□□□ 0.33
MCF2L-223ENST00000473345 KDM6BO15054 1643 aa17.13■□□□□ 0.33
MCF2L-223ENST00000473345 TTBK1Q5TCY1 1321 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-223ENST00000473345 TSPOAP1O95153 1857 aa17.12■□□□□ 0.33
MCF2L-223ENST00000473345 CARMIL1Q5VZK9 1371 aa17.11■□□□□ 0.33
MCF2L-223ENST00000473345 PTPRGP23470 1445 aa17.11■□□□□ 0.33
MCF2L-223ENST00000473345 PPRC1Q5VV67 1664 aaKnown RBP17.09■□□□□ 0.33
MCF2L-223ENST00000473345 ABCC2Q92887 1545 aa17.06■□□□□ 0.32
MCF2L-223ENST00000473345 DISP1Q96F81 1524 aa17.06■□□□□ 0.32
MCF2L-223ENST00000473345 COL17A1Q9UMD9 1497 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-223ENST00000473345 ASXL2Q76L83 1435 aa17.05■□□□□ 0.32
MCF2L-223ENST00000473345 TNIKQ9UKE5 1360 aa17.05■□□□□ 0.32
MCF2L-223ENST00000473345 IQGAP2Q13576 1575 aa17.02■□□□□ 0.32
MCF2L-223ENST00000473345 UHRF1BP1LA0JNW5 1464 aa17■□□□□ 0.31
MCF2L-223ENST00000473345 GLI2P10070 1586 aa17■□□□□ 0.31
MCF2L-223ENST00000473345 UACAQ9BZF9 1416 aa16.98■□□□□ 0.31
MCF2L-223ENST00000473345 CARMIL2Q6F5E8 1435 aa16.97■□□□□ 0.31
MCF2L-223ENST00000473345 PLB1Q6P1J6 1458 aa16.97■□□□□ 0.31
MCF2L-223ENST00000473345 EPRSP07814 1512 aaKnown RBP16.96■□□□□ 0.3
MCF2L-223ENST00000473345 KDM5BQ9UGL1 1544 aa16.96■□□□□ 0.3
MCF2L-223ENST00000473345 UGGT2Q9NYU1 1516 aa16.94■□□□□ 0.3
MCF2L-223ENST00000473345 ADGRL1O94910 1474 aa16.93■□□□□ 0.3
MCF2L-223ENST00000473345 MAP3K4Q9Y6R4 1608 aa16.93■□□□□ 0.3
MCF2L-223ENST00000473345 ZCCHC11Q5TAX3 1644 aaKnown RBP16.92■□□□□ 0.3
MCF2L-223ENST00000473345 KIAA0556O60303 1618 aa16.91■□□□□ 0.3
MCF2L-223ENST00000473345 RAPGEF2Q9Y4G8 1499 aa16.9■□□□□ 0.3
MCF2L-223ENST00000473345 ILDR1Q86SU0 546 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-223ENST00000473345 WDR7Q9Y4E6 1490 aa16.82■□□□□ 0.28
MCF2L-223ENST00000473345 ABCA8O94911 1581 aa16.8■□□□□ 0.28
MCF2L-223ENST00000473345 HECW2Q9P2P5 1572 aa16.78■□□□□ 0.28
MCF2L-223ENST00000473345 TEX14Q8IWB6 1497 aa16.78■□□□□ 0.28
MCF2L-223ENST00000473345 CTTNBP2Q8WZ74 1663 aa16.75■□□□□ 0.27
MCF2L-223ENST00000473345 MAGI3Q5TCQ9 1506 aa16.74■□□□□ 0.27
MCF2L-223ENST00000473345 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
MCF2L-223ENST00000473345 CD109Q6YHK3 1445 aa16.73■□□□□ 0.27
MCF2L-223ENST00000473345 KCNH8Q96L42 1107 aa16.73■□□□□ 0.27
MCF2L-223ENST00000473345 ARID3CA6NKF2 412 aa16.71■□□□□ 0.27
MCF2L-223ENST00000473345 CFAP43Q8NDM7 1665 aa16.69■□□□□ 0.26
MCF2L-223ENST00000473345 ATP10BO94823 1461 aa16.67■□□□□ 0.26
MCF2L-223ENST00000473345 GOLGA3Q08378 1498 aa16.67■□□□□ 0.26
MCF2L-223ENST00000473345 KIF21BO75037 1637 aa16.67■□□□□ 0.26
MCF2L-223ENST00000473345 P3H3Q8IVL6 736 aa16.66■□□□□ 0.26
MCF2L-223ENST00000473345 ARAP3Q8WWN8 1544 aa16.62■□□□□ 0.25
MCF2L-223ENST00000473345 FRMPD1Q5SYB0 1578 aa16.58■□□□□ 0.24
MCF2L-223ENST00000473345 ABCA9Q8IUA7 1624 aa16.57■□□□□ 0.24
MCF2L-223ENST00000473345 SAMD9Q5K651 1589 aa16.57■□□□□ 0.24
MCF2L-223ENST00000473345 RAPGEF3O95398 923 aa16.57■□□□□ 0.24
MCF2L-223ENST00000473345 ADAMTSL3P82987 1691 aa16.55■□□□□ 0.24
MCF2L-223ENST00000473345 PTPRMP28827 1452 aa16.53■□□□□ 0.24
MCF2L-223ENST00000473345 NUP153P49790 1475 aaKnown RBP16.53■□□□□ 0.24
MCF2L-223ENST00000473345 RAPGEF6Q8TEU7 1601 aa16.51■□□□□ 0.23
MCF2L-223ENST00000473345 FHOD3Q2V2M9 1422 aa16.48■□□□□ 0.23
MCF2L-223ENST00000473345 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
MCF2L-223ENST00000473345 NEO1Q92859 1461 aa16.48■□□□□ 0.23
MCF2L-223ENST00000473345 MADDQ8WXG6 1647 aa16.47■□□□□ 0.23
MCF2L-223ENST00000473345 BCORL1Q5H9F3 1711 aa16.46■□□□□ 0.23
MCF2L-223ENST00000473345 SIGLEC1Q9BZZ2 1709 aa16.46■□□□□ 0.23
MCF2L-223ENST00000473345 RANGAP1P46060 587 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-223ENST00000473345 PHLDB1Q86UU1 1377 aa16.44■□□□□ 0.22
MCF2L-223ENST00000473345 LMTK3Q96Q04 1460 aa16.43■□□□□ 0.22
MCF2L-223ENST00000473345 RICTORQ6R327 1708 aa16.41■□□□□ 0.22
MCF2L-223ENST00000473345 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.4■□□□□ 0.22
MCF2L-223ENST00000473345 ARHGEF40Q8TER5 1519 aa16.4■□□□□ 0.22
MCF2L-223ENST00000473345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-223ENST00000473345 HNRNPUL2Q1KMD3 747 aaKnown RBP16.4■□□□□ 0.22
MCF2L-223ENST00000473345 PCF11O94913 1555 aaKnown RBP16.39■□□□□ 0.21
MCF2L-223ENST00000473345 TTC37Q6PGP7 1564 aa16.39■□□□□ 0.21
MCF2L-223ENST00000473345 YEATS2Q9ULM3 1422 aa16.39■□□□□ 0.21
MCF2L-223ENST00000473345 FBXO41Q8TF61 875 aa16.39■□□□□ 0.21
MCF2L-223ENST00000473345 AKNAQ7Z591 1439 aa16.37■□□□□ 0.21
MCF2L-223ENST00000473345 RIMS1Q86UR5 1692 aaKnown RBP16.37■□□□□ 0.21
MCF2L-223ENST00000473345 DENND4BO75064 1496 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-223ENST00000473345 CDK13Q14004 1512 aaKnown RBP16.36■□□□□ 0.21
MCF2L-223ENST00000473345 ARID4BQ4LE39 1312 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-223ENST00000473345 FANCAO15360 1455 aa16.35■□□□□ 0.21
MCF2L-223ENST00000473345 HSPA2P54652 639 aa16.35■□□□□ 0.21
MCF2L-223ENST00000473345 FAM9AQ8IZU1 332 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-223ENST00000473345 ZMYM4Q5VZL5 1548 aa16.33■□□□□ 0.2
MCF2L-223ENST00000473345 PLEKHD1A6NEE1 506 aa16.32■□□□□ 0.2
MCF2L-223ENST00000473345 HECW1Q76N89 1606 aa16.3■□□□□ 0.2
MCF2L-223ENST00000473345 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
MCF2L-223ENST00000473345 ZFYVE16Q7Z3T8 1539 aa16.29■□□□□ 0.2
MCF2L-223ENST00000473345 EEA1Q15075 1411 aa16.28■□□□□ 0.2
MCF2L-223ENST00000473345 POGZQ7Z3K3 1410 aa16.27■□□□□ 0.19
MCF2L-223ENST00000473345 EFCAB5A4FU69 1503 aa16.26■□□□□ 0.19
MCF2L-223ENST00000473345 MLECQ14165 292 aa16.26■□□□□ 0.19
MCF2L-223ENST00000473345 EHMT2Q96KQ7 1210 aa16.26■□□□□ 0.19
MCF2L-223ENST00000473345 PLCH2O75038 1416 aa16.26■□□□□ 0.19
MCF2L-223ENST00000473345 SCAPERQ9BY12 1400 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms