RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 CTTNBP2Q8WZ74 1663 aa27.27■■□□□ 1.96
CCM2-205ENST00000472223 KIAA0586Q9BVV6 1533 aa27.27■■□□□ 1.96
CCM2-205ENST00000472223 LOC105371045A0A1W2PR82 267 aa27.23■■□□□ 1.95
CCM2-205ENST00000472223 IQGAP2Q13576 1575 aa27.2■■□□□ 1.94
CCM2-205ENST00000472223 CLASP1Q7Z460 1538 aa27.18■■□□□ 1.94
CCM2-205ENST00000472223 JPH4Q96JJ6 628 aa27.17■■□□□ 1.94
CCM2-205ENST00000472223 TNIKQ9UKE5 1360 aa27.17■■□□□ 1.94
CCM2-205ENST00000472223 RANGAP1P46060 587 aaPredicted RBP27.13■■□□□ 1.93
CCM2-205ENST00000472223 CARMIL2Q6F5E8 1435 aa27.06■■□□□ 1.92
CCM2-205ENST00000472223 SHROOM2Q13796 1616 aa27.05■■□□□ 1.92
CCM2-205ENST00000472223 PRG4Q92954 1404 aaPredicted RBP27.03■■□□□ 1.92
CCM2-205ENST00000472223 UGGT2Q9NYU1 1516 aa27.03■■□□□ 1.92
CCM2-205ENST00000472223 EFCAB5A4FU69 1503 aa26.95■■□□□ 1.91
CCM2-205ENST00000472223 CLIP1P30622 1438 aa26.94■■□□□ 1.9
CCM2-205ENST00000472223 CEP162Q5TB80 1403 aa26.92■■□□□ 1.9
CCM2-205ENST00000472223 P3H3Q8IVL6 736 aa26.92■■□□□ 1.9
CCM2-205ENST00000472223 KIAA0556O60303 1618 aa26.9■■□□□ 1.9
CCM2-205ENST00000472223 DISP1Q96F81 1524 aa26.9■■□□□ 1.9
CCM2-205ENST00000472223 DNAJC5Q9H3Z4 198 aa26.89■■□□□ 1.9
CCM2-205ENST00000472223 SAMD9Q5K651 1589 aa26.88■■□□□ 1.89
CCM2-205ENST00000472223 ARHGEF11O15085 1522 aa26.88■■□□□ 1.89
CCM2-205ENST00000472223 TTBK1Q5TCY1 1321 aaPredicted RBP26.87■■□□□ 1.89
CCM2-205ENST00000472223 ARHGAP35Q9NRY4 1499 aa26.83■■□□□ 1.89
CCM2-205ENST00000472223 ERCC6L2Q5T890 1561 aa26.83■■□□□ 1.89
CCM2-205ENST00000472223 RIMBP3CA6NJZ7 1639 aa26.83■■□□□ 1.88
CCM2-205ENST00000472223 RIMBP3BA6NNM3 1639 aa26.83■■□□□ 1.88
CCM2-205ENST00000472223 RIMBP3Q9UFD9 1639 aa26.83■■□□□ 1.88
CCM2-205ENST00000472223 PTPRGP23470 1445 aa26.82■■□□□ 1.88
CCM2-205ENST00000472223 FHOD3Q2V2M9 1422 aa26.79■■□□□ 1.88
CCM2-205ENST00000472223 FMN1Q68DA7 1419 aa26.74■■□□□ 1.87
CCM2-205ENST00000472223 CYB5RLQ6IPT4 315 aa26.71■■□□□ 1.87
CCM2-205ENST00000472223 ARAP1Q96P48 1450 aa26.69■■□□□ 1.86
CCM2-205ENST00000472223 ATP1B4Q9UN42 357 aaPredicted RBP26.65■■□□□ 1.86
CCM2-205ENST00000472223 UACAQ9BZF9 1416 aa26.63■■□□□ 1.85
CCM2-205ENST00000472223 NPM1P06748 294 aaKnown RBP eCLIP26.59■■□□□ 1.85
CCM2-205ENST00000472223 RAPGEF6Q8TEU7 1601 aa26.58■■□□□ 1.85
CCM2-205ENST00000472223 VPS8Q8N3P4 1428 aa26.57■■□□□ 1.84
CCM2-205ENST00000472223 PLB1Q6P1J6 1458 aa26.57■■□□□ 1.84
CCM2-205ENST00000472223 ABCA8O94911 1581 aa26.55■■□□□ 1.84
CCM2-205ENST00000472223 UHRF1BP1LA0JNW5 1464 aa26.54■■□□□ 1.84
CCM2-205ENST00000472223 ABCC2Q92887 1545 aa26.54■■□□□ 1.84
CCM2-205ENST00000472223 CASKIN1Q8WXD9 1431 aa26.53■■□□□ 1.84
CCM2-205ENST00000472223 APLP2Q06481 763 aa26.52■■□□□ 1.84
CCM2-205ENST00000472223 HECW1Q76N89 1606 aa26.52■■□□□ 1.84
CCM2-205ENST00000472223 FYCO1Q9BQS8 1478 aa26.51■■□□□ 1.83
CCM2-205ENST00000472223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.51■■□□□ 1.83
CCM2-205ENST00000472223 HNRNPUL2Q1KMD3 747 aaKnown RBP26.51■■□□□ 1.83
CCM2-205ENST00000472223 PCF11O94913 1555 aaKnown RBP26.48■■□□□ 1.83
CCM2-205ENST00000472223 ADCY10Q96PN6 1610 aa26.47■■□□□ 1.83
CCM2-205ENST00000472223 ARID3CA6NKF2 412 aa26.45■■□□□ 1.82
CCM2-205ENST00000472223 NUP153P49790 1475 aaKnown RBP26.42■■□□□ 1.82
CCM2-205ENST00000472223 CCDC18Q5T9S5 1454 aa26.42■■□□□ 1.82
CCM2-205ENST00000472223 CDK11AQ9UQ88 783 aaPredicted RBP26.42■■□□□ 1.82
CCM2-205ENST00000472223 EPRSP07814 1512 aaKnown RBP26.39■■□□□ 1.81
CCM2-205ENST00000472223 KDM5BQ9UGL1 1544 aa26.39■■□□□ 1.81
CCM2-205ENST00000472223 ATP10BO94823 1461 aa26.36■■□□□ 1.81
CCM2-205ENST00000472223 ZCCHC11Q5TAX3 1644 aaKnown RBP26.36■■□□□ 1.81
CCM2-205ENST00000472223 PLEKHD1A6NEE1 506 aa26.35■■□□□ 1.81
CCM2-205ENST00000472223 CDK13Q14004 1512 aaKnown RBP26.31■■□□□ 1.8
CCM2-205ENST00000472223 LRRIQ1Q96JM4 1722 aa26.29■■□□□ 1.8
CCM2-205ENST00000472223 MAP3K1Q13233 1512 aa26.27■■□□□ 1.8
CCM2-205ENST00000472223 TIAM1Q13009 1591 aa26.24■■□□□ 1.79
CCM2-205ENST00000472223 MTUS2Q5JR59 1369 aa26.24■■□□□ 1.79
CCM2-205ENST00000472223 MAPKBP1O60336 1514 aa26.24■■□□□ 1.79
CCM2-205ENST00000472223 ASXL2Q76L83 1435 aa26.23■■□□□ 1.79
CCM2-205ENST00000472223 CFAP43Q8NDM7 1665 aa26.23■■□□□ 1.79
CCM2-205ENST00000472223 KCNH8Q96L42 1107 aa26.2■■□□□ 1.78
CCM2-205ENST00000472223 WDR7Q9Y4E6 1490 aa26.19■■□□□ 1.78
CCM2-205ENST00000472223 TROQ12816 1431 aaPredicted RBP26.16■■□□□ 1.78
CCM2-205ENST00000472223 LRRC9Q6ZRR7 1453 aa26.14■■□□□ 1.78
CCM2-205ENST00000472223 EHBP1L1Q8N3D4 1523 aa26.14■■□□□ 1.77
CCM2-205ENST00000472223 KANK4Q5T7N3 995 aaPredicted RBP26.1■■□□□ 1.77
CCM2-205ENST00000472223 KIF14Q15058 1648 aa26.1■■□□□ 1.77
CCM2-205ENST00000472223 TRHP20396 242 aaPredicted RBP26.07■■□□□ 1.76
CCM2-205ENST00000472223 MAGI3Q5TCQ9 1506 aa26.07■■□□□ 1.76
CCM2-205ENST00000472223 SUPT6HQ7KZ85 1726 aaKnown RBP26.06■■□□□ 1.76
CCM2-205ENST00000472223 FAM69CQ0P6D2 419 aa26.06■■□□□ 1.76
CCM2-205ENST00000472223 ABCC10Q5T3U5 1492 aa26.04■■□□□ 1.76
CCM2-205ENST00000472223 PPARGC1BQ86YN6 1023 aaKnown RBP26.04■■□□□ 1.76
CCM2-205ENST00000472223 DIP2BQ9P265 1576 aa25.99■■□□□ 1.75
CCM2-205ENST00000472223 GLI2P10070 1586 aa25.99■■□□□ 1.75
CCM2-205ENST00000472223 CCNB3Q8WWL7 1395 aa25.98■■□□□ 1.75
CCM2-205ENST00000472223 NCOA2Q15596 1464 aa25.97■■□□□ 1.75
CCM2-205ENST00000472223 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.96■■□□□ 1.75
CCM2-205ENST00000472223 ABCA9Q8IUA7 1624 aa25.96■■□□□ 1.75
CCM2-205ENST00000472223 CD109Q6YHK3 1445 aa25.94■■□□□ 1.74
CCM2-205ENST00000472223 KIF13AQ9H1H9 1805 aa25.93■■□□□ 1.74
CCM2-205ENST00000472223 MYO5CQ9NQX4 1742 aa25.91■■□□□ 1.74
CCM2-205ENST00000472223 TTC37Q6PGP7 1564 aa25.9■■□□□ 1.74
CCM2-205ENST00000472223 ITSN2Q9NZM3 1697 aa25.89■■□□□ 1.73
CCM2-205ENST00000472223 CFDP1Q9UEE9 299 aaPredicted RBP25.88■■□□□ 1.73
CCM2-205ENST00000472223 MAP3K4Q9Y6R4 1608 aa25.88■■□□□ 1.73
CCM2-205ENST00000472223 EFCAB2Q5VUJ9 269 aa25.86■■□□□ 1.73
CCM2-205ENST00000472223 PLCH2O75038 1416 aa25.86■■□□□ 1.73
CCM2-205ENST00000472223 TSPOAP1O95153 1857 aa25.85■■□□□ 1.73
CCM2-205ENST00000472223 ARHGAP5Q13017 1502 aa25.83■■□□□ 1.73
CCM2-205ENST00000472223 GPATCH8Q9UKJ3 1502 aaKnown RBP25.83■■□□□ 1.73
CCM2-205ENST00000472223 CDC42BPAQ5VT25 1732 aa25.83■■□□□ 1.73
CCM2-205ENST00000472223 MYOM3Q5VTT5 1437 aa25.83■■□□□ 1.73
CCM2-205ENST00000472223 TEX14Q8IWB6 1497 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms