RNA–Protein interactions for RNA: ENST00000471308.5

PCBP4-208, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,087 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-208ENST00000471308 CLSPNQ9HAW4 1339 aa25.24■■□□□ 1.63
PCBP4-208ENST00000471308 CCNB3Q8WWL7 1395 aa25.23■■□□□ 1.63
PCBP4-208ENST00000471308 PCF11O94913 1555 aaKnown RBP25.22■■□□□ 1.63
PCBP4-208ENST00000471308 LRRC9Q6ZRR7 1453 aa25.19■■□□□ 1.62
PCBP4-208ENST00000471308 FYCO1Q9BQS8 1478 aa25.17■■□□□ 1.62
PCBP4-208ENST00000471308 DIEXFQ68CQ4 756 aaKnown RBP25.17■■□□□ 1.62
PCBP4-208ENST00000471308 AQRO60306 1485 aaKnown RBP eCLIP25.17■■□□□ 1.621e-8■■■□□ 18.9
PCBP4-208ENST00000471308 GAPVD1Q14C86 1478 aa25.15■■□□□ 1.62
PCBP4-208ENST00000471308 ZNF316A6NFI3 1004 aaPredicted RBP25.13■■□□□ 1.61
PCBP4-208ENST00000471308 TARBP1Q13395 1621 aaKnown RBP25.12■■□□□ 1.61
PCBP4-208ENST00000471308 DHX57Q6P158 1386 aaKnown RBP25.12■■□□□ 1.61
PCBP4-208ENST00000471308 FHOD3Q2V2M9 1422 aa25.1■■□□□ 1.61
PCBP4-208ENST00000471308 CASKIN1Q8WXD9 1431 aa25.1■■□□□ 1.61
PCBP4-208ENST00000471308 SAMD9Q5K651 1589 aa25.07■■□□□ 1.6
PCBP4-208ENST00000471308 FMN1Q68DA7 1419 aa25.07■■□□□ 1.6
PCBP4-208ENST00000471308 TDRD9Q8NDG6 1382 aaKnown RBP25.06■■□□□ 1.6
PCBP4-208ENST00000471308 PBRM1Q86U86 1689 aa25.03■■□□□ 1.6
PCBP4-208ENST00000471308 DNAJC5BQ9UF47 199 aa25.03■■□□□ 1.6
PCBP4-208ENST00000471308 P3H3Q8IVL6 736 aa25■■□□□ 1.59
PCBP4-208ENST00000471308 PHLDB1Q86UU1 1377 aa24.99■■□□□ 1.59
PCBP4-208ENST00000471308 SNAPC4Q5SXM2 1469 aa24.98■■□□□ 1.59
PCBP4-208ENST00000471308 MRC2Q9UBG0 1479 aa24.98■■□□□ 1.59
PCBP4-208ENST00000471308 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
PCBP4-208ENST00000471308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.91■■□□□ 1.58
PCBP4-208ENST00000471308 ADAMTS12P58397 1594 aa24.9■■□□□ 1.58
PCBP4-208ENST00000471308 RAB3GAP2Q9H2M9 1393 aa24.88■■□□□ 1.57
PCBP4-208ENST00000471308 ATP1B4Q9UN42 357 aaPredicted RBP24.88■■□□□ 1.57
PCBP4-208ENST00000471308 SETD5Q9C0A6 1442 aa24.87■■□□□ 1.57
PCBP4-208ENST00000471308 LRRIQ1Q96JM4 1722 aa24.87■■□□□ 1.57
PCBP4-208ENST00000471308 ITGAEP38570 1179 aa24.86■■□□□ 1.57
PCBP4-208ENST00000471308 GRIN2BQ13224 1484 aa24.86■■□□□ 1.57
PCBP4-208ENST00000471308 WDR62O43379 1518 aa24.83■■□□□ 1.57
PCBP4-208ENST00000471308 IQGAP2Q13576 1575 aa24.82■■□□□ 1.56
PCBP4-208ENST00000471308 IFT140Q96RY7 1462 aa24.81■■□□□ 1.56
PCBP4-208ENST00000471308 FAM50AQ14320 339 aaKnown RBP24.79■■□□□ 1.56
PCBP4-208ENST00000471308 EHBP1L1Q8N3D4 1523 aa24.79■■□□□ 1.56
PCBP4-208ENST00000471308 MTUS2Q5JR59 1369 aa24.79■■□□□ 1.56
PCBP4-208ENST00000471308 SUPT6HQ7KZ85 1726 aaKnown RBP24.78■■□□□ 1.56
PCBP4-208ENST00000471308 MAPKBP1O60336 1514 aa24.78■■□□□ 1.56
PCBP4-208ENST00000471308 FGD6Q6ZV73 1430 aa24.78■■□□□ 1.56
PCBP4-208ENST00000471308 CENPBP07199 599 aaPredicted RBP24.77■■□□□ 1.56
PCBP4-208ENST00000471308 CCDC18Q5T9S5 1454 aa24.77■■□□□ 1.56
PCBP4-208ENST00000471308 HECW1Q76N89 1606 aa24.75■■□□□ 1.55
PCBP4-208ENST00000471308 ACIN1Q9UKV3 1341 aaKnown RBP24.74■■□□□ 1.55
PCBP4-208ENST00000471308 PELP1Q8IZL8 1130 aaKnown RBP24.72■■□□□ 1.55
PCBP4-208ENST00000471308 SCAF1Q9H7N4 1312 aaKnown RBP24.72■■□□□ 1.55
PCBP4-208ENST00000471308 NCOA2Q15596 1464 aa24.7■■□□□ 1.54
PCBP4-208ENST00000471308 UGGT2Q9NYU1 1516 aa24.69■■□□□ 1.54
PCBP4-208ENST00000471308 MYOM3Q5VTT5 1437 aa24.67■■□□□ 1.54
PCBP4-208ENST00000471308 ARHGEF11O15085 1522 aa24.66■■□□□ 1.54
PCBP4-208ENST00000471308 ZNF608Q9ULD9 1512 aaPredicted RBP24.64■■□□□ 1.54
PCBP4-208ENST00000471308 EIF4G3O43432 1585 aaKnown RBP24.63■■□□□ 1.53
PCBP4-208ENST00000471308 NEUROD1Q13562 356 aa24.62■■□□□ 1.53
PCBP4-208ENST00000471308 PTPN23Q9H3S7 1636 aa24.6■■□□□ 1.53
PCBP4-208ENST00000471308 MAGI3Q5TCQ9 1506 aa24.6■■□□□ 1.53
PCBP4-208ENST00000471308 MIER1Q8N108 512 aa24.59■■□□□ 1.53
PCBP4-208ENST00000471308 EPRSP07814 1512 aaKnown RBP24.59■■□□□ 1.53
PCBP4-208ENST00000471308 KIAA0586Q9BVV6 1533 aa24.59■■□□□ 1.53
PCBP4-208ENST00000471308 HFM1A2PYH4 1435 aa24.58■■□□□ 1.53
PCBP4-208ENST00000471308 ERCC6Q03468 1493 aa24.56■■□□□ 1.52
PCBP4-208ENST00000471308 KIAA0556O60303 1618 aa24.56■■□□□ 1.52
PCBP4-208ENST00000471308 GRIN2AQ12879 1464 aa24.54■■□□□ 1.52
PCBP4-208ENST00000471308 TIMELESSQ9UNS1 1208 aa24.54■■□□□ 1.52
PCBP4-208ENST00000471308 TCOF1Q13428 1488 aaKnown RBP24.53■■□□□ 1.52
PCBP4-208ENST00000471308 MAGI1Q96QZ7 1491 aaPredicted RBP24.52■■□□□ 1.52
PCBP4-208ENST00000471308 PTPRKQ15262 1439 aa24.5■■□□□ 1.51
PCBP4-208ENST00000471308 UACAQ9BZF9 1416 aa24.49■■□□□ 1.51
PCBP4-208ENST00000471308 DISP1Q96F81 1524 aa24.48■■□□□ 1.51
PCBP4-208ENST00000471308 CDK13Q14004 1512 aaKnown RBP24.47■■□□□ 1.51
PCBP4-208ENST00000471308 GCC2Q8IWJ2 1684 aa24.47■■□□□ 1.51
PCBP4-208ENST00000471308 MIA2Q96PC5 1412 aa24.47■■□□□ 1.51
PCBP4-208ENST00000471308 NAIPQ13075 1403 aa24.46■■□□□ 1.51
PCBP4-208ENST00000471308 RAPGEF6Q8TEU7 1601 aa24.44■■□□□ 1.5
PCBP4-208ENST00000471308 AKNAQ7Z591 1439 aa24.44■■□□□ 1.5
PCBP4-208ENST00000471308 SYNJ2O15056 1496 aa24.42■■□□□ 1.5
PCBP4-208ENST00000471308 SIN3AQ96ST3 1273 aa24.39■■□□□ 1.49
PCBP4-208ENST00000471308 CEP170Q5SW79 1584 aa24.37■■□□□ 1.49
PCBP4-208ENST00000471308 NUP153P49790 1475 aaKnown RBP24.36■■□□□ 1.49
PCBP4-208ENST00000471308 YTHDC1Q96MU7 727 aaKnown RBP24.36■■□□□ 1.49
PCBP4-208ENST00000471308 GTF3C3Q9Y5Q9 886 aa24.34■■□□□ 1.49
PCBP4-208ENST00000471308 NUP160Q12769 1436 aa24.29■■□□□ 1.48
PCBP4-208ENST00000471308 CHMP7Q8WUX9 453 aaPredicted RBP24.29■■□□□ 1.48
PCBP4-208ENST00000471308 TONSLQ96HA7 1378 aa24.28■■□□□ 1.48
PCBP4-208ENST00000471308 PPP1R15AO75807 674 aaPredicted RBP24.28■■□□□ 1.48
PCBP4-208ENST00000471308 DNMT1P26358 1616 aaKnown RBP24.27■■□□□ 1.48
PCBP4-208ENST00000471308 CDK11AQ9UQ88 783 aaPredicted RBP24.27■■□□□ 1.48
PCBP4-208ENST00000471308 CARMIL2Q6F5E8 1435 aa24.26■■□□□ 1.47
PCBP4-208ENST00000471308 ITSN2Q9NZM3 1697 aa24.25■■□□□ 1.47
PCBP4-208ENST00000471308 ADCY10Q96PN6 1610 aa24.25■■□□□ 1.47
PCBP4-208ENST00000471308 ROCK1Q13464 1354 aa24.22■■□□□ 1.47
PCBP4-208ENST00000471308 TROQ12816 1431 aaPredicted RBP24.21■■□□□ 1.47
PCBP4-208ENST00000471308 DAPK1P53355 1430 aa24.21■■□□□ 1.47
PCBP4-208ENST00000471308 ARID3CA6NKF2 412 aa24.19■■□□□ 1.46
PCBP4-208ENST00000471308 RRP7BPQ9NSQ0 103 aa24.19■■□□□ 1.46
PCBP4-208ENST00000471308 KDM6BO15054 1643 aa24.18■■□□□ 1.46
PCBP4-208ENST00000471308 CHIC2Q9UKJ5 165 aa24.17■■□□□ 1.46
PCBP4-208ENST00000471308 PLB1Q6P1J6 1458 aa24.16■■□□□ 1.46
PCBP4-208ENST00000471308 ABCC5O15440 1437 aa24.14■■□□□ 1.45
PCBP4-208ENST00000471308 DENND4BO75064 1496 aaPredicted RBP24.13■■□□□ 1.45
PCBP4-208ENST00000471308 KDM5BQ9UGL1 1544 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms