RNA–Protein interactions for RNA: ENST00000471126.1

CNOT3-206, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-206ENST00000471126 ADAMTS12P58397 1594 aa27.04■■□□□ 1.92
CNOT3-206ENST00000471126 DIP2BQ9P265 1576 aa27.02■■□□□ 1.92
CNOT3-206ENST00000471126 FHAD1B1AJZ9 1412 aa27.02■■□□□ 1.92
CNOT3-206ENST00000471126 MAPKBP1O60336 1514 aa27.01■■□□□ 1.91
CNOT3-206ENST00000471126 ADGRL1O94910 1474 aa26.9■■□□□ 1.9
CNOT3-206ENST00000471126 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
CNOT3-206ENST00000471126 HECW2Q9P2P5 1572 aa26.84■■□□□ 1.89
CNOT3-206ENST00000471126 ADCY10Q96PN6 1610 aa26.84■■□□□ 1.89
CNOT3-206ENST00000471126 TSPOAP1O95153 1857 aa26.84■■□□□ 1.89
CNOT3-206ENST00000471126 FBXO41Q8TF61 875 aa26.78■■□□□ 1.88
CNOT3-206ENST00000471126 ERICH3Q5RHP9 1530 aa26.77■■□□□ 1.88
CNOT3-206ENST00000471126 BIVM-ERCC5R4GMW8 1640 aa26.75■■□□□ 1.87
CNOT3-206ENST00000471126 TOP2BQ02880 1626 aa26.72■■□□□ 1.87
CNOT3-206ENST00000471126 RUSC2Q8N2Y8 1516 aa26.67■■□□□ 1.86
CNOT3-206ENST00000471126 COL17A1Q9UMD9 1497 aaPredicted RBP26.62■■□□□ 1.85
CNOT3-206ENST00000471126 TTBK1Q5TCY1 1321 aaPredicted RBP26.6■■□□□ 1.85
CNOT3-206ENST00000471126 PTPRGP23470 1445 aa26.56■■□□□ 1.84
CNOT3-206ENST00000471126 ASXL2Q76L83 1435 aa26.56■■□□□ 1.84
CNOT3-206ENST00000471126 PPRC1Q5VV67 1664 aaKnown RBP26.54■■□□□ 1.84
CNOT3-206ENST00000471126 KIAA0586Q9BVV6 1533 aa26.53■■□□□ 1.84
CNOT3-206ENST00000471126 PLB1Q6P1J6 1458 aa26.52■■□□□ 1.84
CNOT3-206ENST00000471126 GLI2P10070 1586 aa26.51■■□□□ 1.83
CNOT3-206ENST00000471126 ABCC2Q92887 1545 aa26.49■■□□□ 1.83
CNOT3-206ENST00000471126 TNIKQ9UKE5 1360 aa26.39■■□□□ 1.82
CNOT3-206ENST00000471126 TEX14Q8IWB6 1497 aa26.36■■□□□ 1.81
CNOT3-206ENST00000471126 EPRSP07814 1512 aaKnown RBP26.36■■□□□ 1.81
CNOT3-206ENST00000471126 LMTK3Q96Q04 1460 aa26.36■■□□□ 1.81
CNOT3-206ENST00000471126 CARMIL2Q6F5E8 1435 aa26.31■■□□□ 1.8
CNOT3-206ENST00000471126 IGF1RP08069 1367 aa26.31■■□□□ 1.8
CNOT3-206ENST00000471126 UHRF1BP1LA0JNW5 1464 aa26.3■■□□□ 1.8
CNOT3-206ENST00000471126 MAP3K4Q9Y6R4 1608 aa26.29■■□□□ 1.8
CNOT3-206ENST00000471126 UACAQ9BZF9 1416 aa26.28■■□□□ 1.8
CNOT3-206ENST00000471126 CUL7Q14999 1698 aa26.26■■□□□ 1.79
CNOT3-206ENST00000471126 KDM5BQ9UGL1 1544 aa26.2■■□□□ 1.79
CNOT3-206ENST00000471126 ILDR2Q71H61 639 aa26.17■■□□□ 1.78
CNOT3-206ENST00000471126 SOCS7O14512 581 aa26.16■■□□□ 1.78
CNOT3-206ENST00000471126 KIF27Q86VH2 1401 aa26.14■■□□□ 1.78
CNOT3-206ENST00000471126 PTPRMP28827 1452 aa26.1■■□□□ 1.77
CNOT3-206ENST00000471126 CARMIL1Q5VZK9 1371 aa26.09■■□□□ 1.77
CNOT3-206ENST00000471126 CD109Q6YHK3 1445 aa26.09■■□□□ 1.77
CNOT3-206ENST00000471126 WDR7Q9Y4E6 1490 aa26.07■■□□□ 1.76
CNOT3-206ENST00000471126 DISP1Q96F81 1524 aa26.07■■□□□ 1.76
CNOT3-206ENST00000471126 KIF21BO75037 1637 aa26.06■■□□□ 1.76
CNOT3-206ENST00000471126 ZCCHC11Q5TAX3 1644 aaKnown RBP26.06■■□□□ 1.76
CNOT3-206ENST00000471126 KCNH8Q96L42 1107 aa26.06■■□□□ 1.76
CNOT3-206ENST00000471126 MAGI3Q5TCQ9 1506 aa26.05■■□□□ 1.76
CNOT3-206ENST00000471126 DISP3Q9P2K9 1392 aa26.05■■□□□ 1.76
CNOT3-206ENST00000471126 IQGAP2Q13576 1575 aa26.03■■□□□ 1.76
CNOT3-206ENST00000471126 CERKQ8TCT0 537 aa25.99■■□□□ 1.75
CNOT3-206ENST00000471126 PCF11O94913 1555 aaKnown RBP25.96■■□□□ 1.75
CNOT3-206ENST00000471126 ADAMTSL3P82987 1691 aa25.93■■□□□ 1.74
CNOT3-206ENST00000471126 HSPA2P54652 639 aa25.93■■□□□ 1.74
CNOT3-206ENST00000471126 ARAP3Q8WWN8 1544 aa25.88■■□□□ 1.73
CNOT3-206ENST00000471126 CFAP43Q8NDM7 1665 aa25.88■■□□□ 1.73
CNOT3-206ENST00000471126 ARID4BQ4LE39 1312 aaPredicted RBP25.88■■□□□ 1.73
CNOT3-206ENST00000471126 UGGT2Q9NYU1 1516 aa25.86■■□□□ 1.73
CNOT3-206ENST00000471126 RAPGEF3O95398 923 aa25.84■■□□□ 1.73
CNOT3-206ENST00000471126 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
CNOT3-206ENST00000471126 KIAA0556O60303 1618 aa25.81■■□□□ 1.72
CNOT3-206ENST00000471126 PLPPR3Q6T4P5 718 aa25.78■■□□□ 1.72
CNOT3-206ENST00000471126 MADDQ8WXG6 1647 aa25.77■■□□□ 1.72
CNOT3-206ENST00000471126 PRXQ9BXM0 1461 aa25.74■■□□□ 1.71
CNOT3-206ENST00000471126 RAPGEF2Q9Y4G8 1499 aa25.74■■□□□ 1.71
CNOT3-206ENST00000471126 EEA1Q15075 1411 aa25.74■■□□□ 1.71
CNOT3-206ENST00000471126 PHLDB1Q86UU1 1377 aa25.74■■□□□ 1.71
CNOT3-206ENST00000471126 BCORL1Q5H9F3 1711 aa25.74■■□□□ 1.71
CNOT3-206ENST00000471126 ARID3CA6NKF2 412 aa25.68■■□□□ 1.7
CNOT3-206ENST00000471126 ABCA8O94911 1581 aa25.67■■□□□ 1.7
CNOT3-206ENST00000471126 RIMS1Q86UR5 1692 aaKnown RBP25.62■■□□□ 1.69
CNOT3-206ENST00000471126 SPATA31D1Q6ZQQ2 1576 aa25.61■■□□□ 1.69
CNOT3-206ENST00000471126 CSRNP3Q8WYN3 585 aa25.6■■□□□ 1.69
CNOT3-206ENST00000471126 NEO1Q92859 1461 aa25.58■■□□□ 1.69
CNOT3-206ENST00000471126 GOLGA3Q08378 1498 aa25.56■■□□□ 1.68
CNOT3-206ENST00000471126 ATP10BO94823 1461 aa25.54■■□□□ 1.68
CNOT3-206ENST00000471126 FRMPD1Q5SYB0 1578 aa25.54■■□□□ 1.68
CNOT3-206ENST00000471126 CTTNBP2Q8WZ74 1663 aa25.53■■□□□ 1.68
CNOT3-206ENST00000471126 ABCA9Q8IUA7 1624 aa25.52■■□□□ 1.68
CNOT3-206ENST00000471126 POGZQ7Z3K3 1410 aa25.5■■□□□ 1.67
CNOT3-206ENST00000471126 MLECQ14165 292 aa25.49■■□□□ 1.67
CNOT3-206ENST00000471126 DMRT2Q9Y5R5 561 aa25.49■■□□□ 1.67
CNOT3-206ENST00000471126 YEATS2Q9ULM3 1422 aa25.46■■□□□ 1.67
CNOT3-206ENST00000471126 FAM9AQ8IZU1 332 aaPredicted RBP25.46■■□□□ 1.67
CNOT3-206ENST00000471126 ARHGEF40Q8TER5 1519 aa25.46■■□□□ 1.67
CNOT3-206ENST00000471126 DENND4BO75064 1496 aaPredicted RBP25.44■■□□□ 1.66
CNOT3-206ENST00000471126 FANCAO15360 1455 aa25.43■■□□□ 1.66
CNOT3-206ENST00000471126 P3H3Q8IVL6 736 aa25.43■■□□□ 1.66
CNOT3-206ENST00000471126 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.42■■□□□ 1.66
CNOT3-206ENST00000471126 HNRNPUL2Q1KMD3 747 aaKnown RBP25.42■■□□□ 1.66
CNOT3-206ENST00000471126 AKNAQ7Z591 1439 aa25.42■■□□□ 1.66
CNOT3-206ENST00000471126 FHOD3Q2V2M9 1422 aa25.38■■□□□ 1.65
CNOT3-206ENST00000471126 CEBPAP49715 358 aaPredicted RBP25.38■■□□□ 1.65
CNOT3-206ENST00000471126 SIGLEC1Q9BZZ2 1709 aa25.31■■□□□ 1.64
CNOT3-206ENST00000471126 TTC37Q6PGP7 1564 aa25.31■■□□□ 1.64
CNOT3-206ENST00000471126 ZFYVE16Q7Z3T8 1539 aa25.29■■□□□ 1.64
CNOT3-206ENST00000471126 RICTORQ6R327 1708 aa25.29■■□□□ 1.64
CNOT3-206ENST00000471126 STRCQ7RTU9 1775 aa25.28■■□□□ 1.64
CNOT3-206ENST00000471126 SAMD9Q5K651 1589 aa25.27■■□□□ 1.64
CNOT3-206ENST00000471126 PTPRTO14522 1441 aa25.25■■□□□ 1.63
CNOT3-206ENST00000471126 PREX1Q8TCU6 1659 aa25.24■■□□□ 1.63
CNOT3-206ENST00000471126 EFCAB5A4FU69 1503 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms