RNA–Protein interactions for RNA: ENST00000470799.5

COL16A1-209, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-209ENST00000470799 CUL7Q14999 1698 aa27.19■■□□□ 1.94
COL16A1-209ENST00000470799 SHROOM2Q13796 1616 aa27.16■■□□□ 1.94
COL16A1-209ENST00000470799 RUSC2Q8N2Y8 1516 aa27.12■■□□□ 1.93
COL16A1-209ENST00000470799 KIAA0586Q9BVV6 1533 aa27.11■■□□□ 1.93
COL16A1-209ENST00000470799 TTBK1Q5TCY1 1321 aaPredicted RBP26.98■■□□□ 1.91
COL16A1-209ENST00000470799 RAPGEF2Q9Y4G8 1499 aa26.97■■□□□ 1.91
COL16A1-209ENST00000470799 NPM1P06748 294 aaKnown RBP eCLIP26.96■■□□□ 1.91
COL16A1-209ENST00000470799 CARMIL2Q6F5E8 1435 aa26.9■■□□□ 1.9
COL16A1-209ENST00000470799 IQGAP2Q13576 1575 aa26.88■■□□□ 1.89
COL16A1-209ENST00000470799 PTPRGP23470 1445 aa26.87■■□□□ 1.89
COL16A1-209ENST00000470799 TNIKQ9UKE5 1360 aa26.82■■□□□ 1.88
COL16A1-209ENST00000470799 CSRNP3Q8WYN3 585 aa26.75■■□□□ 1.87
COL16A1-209ENST00000470799 ADCY10Q96PN6 1610 aa26.74■■□□□ 1.87
COL16A1-209ENST00000470799 PRXQ9BXM0 1461 aa26.73■■□□□ 1.87
COL16A1-209ENST00000470799 FAM69CQ0P6D2 419 aa26.72■■□□□ 1.87
COL16A1-209ENST00000470799 DISP1Q96F81 1524 aa26.7■■□□□ 1.87
COL16A1-209ENST00000470799 UGGT2Q9NYU1 1516 aa26.7■■□□□ 1.86
COL16A1-209ENST00000470799 FAM9AQ8IZU1 332 aaPredicted RBP26.69■■□□□ 1.86
COL16A1-209ENST00000470799 MAPKBP1O60336 1514 aa26.64■■□□□ 1.85
COL16A1-209ENST00000470799 UACAQ9BZF9 1416 aa26.63■■□□□ 1.85
COL16A1-209ENST00000470799 EEA1Q15075 1411 aa26.62■■□□□ 1.85
COL16A1-209ENST00000470799 ABCC10Q5T3U5 1492 aa26.62■■□□□ 1.85
COL16A1-209ENST00000470799 KIAA0556O60303 1618 aa26.6■■□□□ 1.85
COL16A1-209ENST00000470799 GOLGA3Q08378 1498 aa26.6■■□□□ 1.85
COL16A1-209ENST00000470799 CTTNBP2Q8WZ74 1663 aa26.6■■□□□ 1.85
COL16A1-209ENST00000470799 ABCC2Q92887 1545 aa26.6■■□□□ 1.85
COL16A1-209ENST00000470799 CHIC1Q5VXU3 224 aa26.56■■□□□ 1.84
COL16A1-209ENST00000470799 UHRF1BP1LA0JNW5 1464 aa26.55■■□□□ 1.84
COL16A1-209ENST00000470799 KIF13AQ9H1H9 1805 aa26.54■■□□□ 1.84
COL16A1-209ENST00000470799 P3H3Q8IVL6 736 aa26.53■■□□□ 1.84
COL16A1-209ENST00000470799 RANGAP1P46060 587 aaPredicted RBP26.52■■□□□ 1.84
COL16A1-209ENST00000470799 DIP2BQ9P265 1576 aa26.5■■□□□ 1.83
COL16A1-209ENST00000470799 ASXL2Q76L83 1435 aa26.5■■□□□ 1.83
COL16A1-209ENST00000470799 PLB1Q6P1J6 1458 aa26.48■■□□□ 1.83
COL16A1-209ENST00000470799 EHMT2Q96KQ7 1210 aa26.45■■□□□ 1.82
COL16A1-209ENST00000470799 KDM5BQ9UGL1 1544 aa26.43■■□□□ 1.82
COL16A1-209ENST00000470799 ARID3CA6NKF2 412 aa26.37■■□□□ 1.81
COL16A1-209ENST00000470799 ZCCHC11Q5TAX3 1644 aaKnown RBP26.36■■□□□ 1.81
COL16A1-209ENST00000470799 UBTFP17480 764 aaKnown RBP26.35■■□□□ 1.81
COL16A1-209ENST00000470799 TSPOAP1O95153 1857 aa26.34■■□□□ 1.81
COL16A1-209ENST00000470799 KCNH8Q96L42 1107 aa26.32■■□□□ 1.8
COL16A1-209ENST00000470799 ABCA8O94911 1581 aa26.32■■□□□ 1.8
COL16A1-209ENST00000470799 EPRSP07814 1512 aaKnown RBP26.3■■□□□ 1.8
COL16A1-209ENST00000470799 AEBP2Q6ZN18 517 aaPredicted RBP26.3■■□□□ 1.8
COL16A1-209ENST00000470799 KIF21BO75037 1637 aa26.29■■□□□ 1.8
COL16A1-209ENST00000470799 WDR7Q9Y4E6 1490 aa26.29■■□□□ 1.8
COL16A1-209ENST00000470799 GLI2P10070 1586 aa26.29■■□□□ 1.8
COL16A1-209ENST00000470799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.27■■□□□ 1.8
COL16A1-209ENST00000470799 HNRNPUL2Q1KMD3 747 aaKnown RBP26.27■■□□□ 1.8
COL16A1-209ENST00000470799 SAMD9Q5K651 1589 aa26.25■■□□□ 1.79
COL16A1-209ENST00000470799 KDM6BO15054 1643 aa26.24■■□□□ 1.79
COL16A1-209ENST00000470799 FHOD3Q2V2M9 1422 aa26.22■■□□□ 1.79
COL16A1-209ENST00000470799 ATP10BO94823 1461 aa26.17■■□□□ 1.78
COL16A1-209ENST00000470799 TEX14Q8IWB6 1497 aa26.16■■□□□ 1.78
COL16A1-209ENST00000470799 RAPGEF6Q8TEU7 1601 aa26.14■■□□□ 1.77
COL16A1-209ENST00000470799 CD109Q6YHK3 1445 aa26.14■■□□□ 1.77
COL16A1-209ENST00000470799 MAP3K4Q9Y6R4 1608 aa26.13■■□□□ 1.77
COL16A1-209ENST00000470799 EFCAB5A4FU69 1503 aa26.13■■□□□ 1.77
COL16A1-209ENST00000470799 PPRC1Q5VV67 1664 aaKnown RBP26.1■■□□□ 1.77
COL16A1-209ENST00000470799 ATP1B4Q9UN42 357 aaPredicted RBP26.09■■□□□ 1.77
COL16A1-209ENST00000470799 NUP153P49790 1475 aaKnown RBP26.05■■□□□ 1.76
COL16A1-209ENST00000470799 PLEKHD1A6NEE1 506 aa26.05■■□□□ 1.76
COL16A1-209ENST00000470799 MAGI3Q5TCQ9 1506 aa26.01■■□□□ 1.75
COL16A1-209ENST00000470799 CFAP43Q8NDM7 1665 aa26■■□□□ 1.75
COL16A1-209ENST00000470799 COL17A1Q9UMD9 1497 aaPredicted RBP26■■□□□ 1.75
COL16A1-209ENST00000470799 FMN1Q68DA7 1419 aa25.97■■□□□ 1.75
COL16A1-209ENST00000470799 ARHGAP35Q9NRY4 1499 aa25.96■■□□□ 1.75
COL16A1-209ENST00000470799 ABCA9Q8IUA7 1624 aa25.88■■□□□ 1.73
COL16A1-209ENST00000470799 KDM4FA0A1W2PPD8 638 aa25.87■■□□□ 1.73
COL16A1-209ENST00000470799 CDK11AQ9UQ88 783 aaPredicted RBP25.87■■□□□ 1.73
COL16A1-209ENST00000470799 CDK13Q14004 1512 aaKnown RBP25.87■■□□□ 1.73
COL16A1-209ENST00000470799 PHLDB1Q86UU1 1377 aa25.84■■□□□ 1.73
COL16A1-209ENST00000470799 HECW1Q76N89 1606 aa25.82■■□□□ 1.72
COL16A1-209ENST00000470799 ARAP3Q8WWN8 1544 aa25.79■■□□□ 1.72
COL16A1-209ENST00000470799 RAPGEF3O95398 923 aa25.79■■□□□ 1.72
COL16A1-209ENST00000470799 NEO1Q92859 1461 aa25.79■■□□□ 1.72
COL16A1-209ENST00000470799 CLIP1P30622 1438 aa25.76■■□□□ 1.71
COL16A1-209ENST00000470799 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.74■■□□□ 1.71
COL16A1-209ENST00000470799 ADGRL1O94910 1474 aa25.73■■□□□ 1.71
COL16A1-209ENST00000470799 FANCAO15360 1455 aa25.71■■□□□ 1.71
COL16A1-209ENST00000470799 AKNAQ7Z591 1439 aa25.7■■□□□ 1.7
COL16A1-209ENST00000470799 CASKIN1Q8WXD9 1431 aa25.69■■□□□ 1.7
COL16A1-209ENST00000470799 TTC37Q6PGP7 1564 aa25.69■■□□□ 1.7
COL16A1-209ENST00000470799 TROQ12816 1431 aaPredicted RBP25.66■■□□□ 1.7
COL16A1-209ENST00000470799 DENND4BO75064 1496 aaPredicted RBP25.66■■□□□ 1.7
COL16A1-209ENST00000470799 PCF11O94913 1555 aaKnown RBP25.64■■□□□ 1.69
COL16A1-209ENST00000470799 PLCH2O75038 1416 aa25.63■■□□□ 1.69
COL16A1-209ENST00000470799 EFCAB2Q5VUJ9 269 aa25.63■■□□□ 1.69
COL16A1-209ENST00000470799 CCDC18Q5T9S5 1454 aa25.63■■□□□ 1.69
COL16A1-209ENST00000470799 CFAP74Q9C0B2 1584 aa25.62■■□□□ 1.69
COL16A1-209ENST00000470799 ARID4BQ4LE39 1312 aaPredicted RBP25.62■■□□□ 1.69
COL16A1-209ENST00000470799 KIF14Q15058 1648 aa25.6■■□□□ 1.69
COL16A1-209ENST00000470799 FYCO1Q9BQS8 1478 aa25.6■■□□□ 1.69
COL16A1-209ENST00000470799 SCAPERQ9BY12 1400 aa25.56■■□□□ 1.68
COL16A1-209ENST00000470799 LOC105371045A0A1W2PR82 267 aa25.55■■□□□ 1.68
COL16A1-209ENST00000470799 FRMPD1Q5SYB0 1578 aa25.54■■□□□ 1.68
COL16A1-209ENST00000470799 LRRIQ1Q96JM4 1722 aa25.54■■□□□ 1.68
COL16A1-209ENST00000470799 CEP162Q5TB80 1403 aa25.54■■□□□ 1.68
COL16A1-209ENST00000470799 ARHGAP5Q13017 1502 aa25.53■■□□□ 1.68
COL16A1-209ENST00000470799 MYT1LQ9UL68 1186 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms