RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 JPH4Q96JJ6 628 aa20.76■□□□□ 0.91
SND1-209ENST00000470723 AEBP2Q6ZN18 517 aaPredicted RBP20.75■□□□□ 0.91
SND1-209ENST00000470723 GOLGA3Q08378 1498 aa20.68■□□□□ 0.9
SND1-209ENST00000470723 SHROOM2Q13796 1616 aa20.67■□□□□ 0.9
SND1-209ENST00000470723 TRHP20396 242 aaPredicted RBP20.66■□□□□ 0.9
SND1-209ENST00000470723 UBTFP17480 764 aaKnown RBP20.63■□□□□ 0.89
SND1-209ENST00000470723 IQGAP2Q13576 1575 aa20.63■□□□□ 0.89
SND1-209ENST00000470723 PRG4Q92954 1404 aaPredicted RBP20.61■□□□□ 0.89
SND1-209ENST00000470723 CTTNBP2Q8WZ74 1663 aa20.61■□□□□ 0.89
SND1-209ENST00000470723 UGGT2Q9NYU1 1516 aa20.6■□□□□ 0.89
SND1-209ENST00000470723 ARHGEF11O15085 1522 aa20.58■□□□□ 0.89
SND1-209ENST00000470723 TNIKQ9UKE5 1360 aa20.57■□□□□ 0.88
SND1-209ENST00000470723 LOC105371045A0A1W2PR82 267 aa20.55■□□□□ 0.88
SND1-209ENST00000470723 EHMT2Q96KQ7 1210 aa20.54■□□□□ 0.88
SND1-209ENST00000470723 RIMBP3CA6NJZ7 1639 aa20.53■□□□□ 0.88
SND1-209ENST00000470723 RIMBP3BA6NNM3 1639 aa20.53■□□□□ 0.88
SND1-209ENST00000470723 RIMBP3Q9UFD9 1639 aa20.53■□□□□ 0.88
SND1-209ENST00000470723 DISP1Q96F81 1524 aa20.53■□□□□ 0.88
SND1-209ENST00000470723 CARMIL2Q6F5E8 1435 aa20.53■□□□□ 0.88
SND1-209ENST00000470723 ERCC6L2Q5T890 1561 aa20.52■□□□□ 0.88
SND1-209ENST00000470723 CYB5RLQ6IPT4 315 aa20.5■□□□□ 0.87
SND1-209ENST00000470723 ARAP1Q96P48 1450 aa20.45■□□□□ 0.86
SND1-209ENST00000470723 PTPRGP23470 1445 aa20.43■□□□□ 0.86
SND1-209ENST00000470723 SAMD9Q5K651 1589 aa20.42■□□□□ 0.86
SND1-209ENST00000470723 KIAA0556O60303 1618 aa20.42■□□□□ 0.86
SND1-209ENST00000470723 EFCAB5A4FU69 1503 aa20.39■□□□□ 0.85
SND1-209ENST00000470723 RANGAP1P46060 587 aaPredicted RBP20.37■□□□□ 0.85
SND1-209ENST00000470723 P3H3Q8IVL6 736 aa20.37■□□□□ 0.85
SND1-209ENST00000470723 ARHGAP35Q9NRY4 1499 aa20.37■□□□□ 0.85
SND1-209ENST00000470723 CLIP1P30622 1438 aa20.33■□□□□ 0.84
SND1-209ENST00000470723 FHOD3Q2V2M9 1422 aa20.29■□□□□ 0.84
SND1-209ENST00000470723 CEP162Q5TB80 1403 aa20.29■□□□□ 0.84
SND1-209ENST00000470723 UACAQ9BZF9 1416 aa20.29■□□□□ 0.84
SND1-209ENST00000470723 UHRF1BP1LA0JNW5 1464 aa20.28■□□□□ 0.84
SND1-209ENST00000470723 TTBK1Q5TCY1 1321 aaPredicted RBP20.26■□□□□ 0.83
SND1-209ENST00000470723 FMN1Q68DA7 1419 aa20.24■□□□□ 0.83
SND1-209ENST00000470723 ABCA8O94911 1581 aa20.24■□□□□ 0.83
SND1-209ENST00000470723 PLB1Q6P1J6 1458 aa20.23■□□□□ 0.83
SND1-209ENST00000470723 ABCC2Q92887 1545 aa20.2■□□□□ 0.82
SND1-209ENST00000470723 ADCY10Q96PN6 1610 aa20.2■□□□□ 0.82
SND1-209ENST00000470723 NPM1P06748 294 aaKnown RBP eCLIP20.18■□□□□ 0.82
SND1-209ENST00000470723 KDM5BQ9UGL1 1544 aa20.17■□□□□ 0.82
SND1-209ENST00000470723 RAPGEF6Q8TEU7 1601 aa20.14■□□□□ 0.81
SND1-209ENST00000470723 CASKIN1Q8WXD9 1431 aa20.13■□□□□ 0.81
SND1-209ENST00000470723 ATP10BO94823 1461 aa20.11■□□□□ 0.81
SND1-209ENST00000470723 NUP153P49790 1475 aaKnown RBP20.11■□□□□ 0.81
SND1-209ENST00000470723 VPS8Q8N3P4 1428 aa20.06■□□□□ 0.8
SND1-209ENST00000470723 MAPKBP1O60336 1514 aa20.06■□□□□ 0.8
SND1-209ENST00000470723 FYCO1Q9BQS8 1478 aa20.05■□□□□ 0.8
SND1-209ENST00000470723 ZCCHC11Q5TAX3 1644 aaKnown RBP20.03■□□□□ 0.8
SND1-209ENST00000470723 EPRSP07814 1512 aaKnown RBP20.02■□□□□ 0.8
SND1-209ENST00000470723 ATP1B4Q9UN42 357 aaPredicted RBP20.02■□□□□ 0.8
SND1-209ENST00000470723 HECW1Q76N89 1606 aa20.02■□□□□ 0.79
SND1-209ENST00000470723 ASXL2Q76L83 1435 aa20.01■□□□□ 0.79
SND1-209ENST00000470723 PLEKHD1A6NEE1 506 aa19.99■□□□□ 0.79
SND1-209ENST00000470723 ARID3CA6NKF2 412 aa19.99■□□□□ 0.79
SND1-209ENST00000470723 PCF11O94913 1555 aaKnown RBP19.99■□□□□ 0.79
SND1-209ENST00000470723 CDK11AQ9UQ88 783 aaPredicted RBP19.98■□□□□ 0.79
SND1-209ENST00000470723 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.97■□□□□ 0.79
SND1-209ENST00000470723 HNRNPUL2Q1KMD3 747 aaKnown RBP19.97■□□□□ 0.79
SND1-209ENST00000470723 CCDC18Q5T9S5 1454 aa19.97■□□□□ 0.79
SND1-209ENST00000470723 ABCC10Q5T3U5 1492 aa19.95■□□□□ 0.78
SND1-209ENST00000470723 LRRIQ1Q96JM4 1722 aa19.95■□□□□ 0.78
SND1-209ENST00000470723 WDR7Q9Y4E6 1490 aa19.94■□□□□ 0.78
SND1-209ENST00000470723 CDK13Q14004 1512 aaKnown RBP19.94■□□□□ 0.78
SND1-209ENST00000470723 MAP3K1Q13233 1512 aa19.92■□□□□ 0.78
SND1-209ENST00000470723 GLI2P10070 1586 aa19.89■□□□□ 0.77
SND1-209ENST00000470723 FAM69CQ0P6D2 419 aa19.89■□□□□ 0.77
SND1-209ENST00000470723 KCNH8Q96L42 1107 aa19.89■□□□□ 0.77
SND1-209ENST00000470723 TROQ12816 1431 aaPredicted RBP19.87■□□□□ 0.77
SND1-209ENST00000470723 DIP2BQ9P265 1576 aa19.85■□□□□ 0.77
SND1-209ENST00000470723 KIF13AQ9H1H9 1805 aa19.83■□□□□ 0.77
SND1-209ENST00000470723 APLP2Q06481 763 aa19.83■□□□□ 0.77
SND1-209ENST00000470723 MAGI3Q5TCQ9 1506 aa19.82■□□□□ 0.76
SND1-209ENST00000470723 TIAM1Q13009 1591 aa19.82■□□□□ 0.76
SND1-209ENST00000470723 KANK4Q5T7N3 995 aaPredicted RBP19.8■□□□□ 0.76
SND1-209ENST00000470723 MTUS2Q5JR59 1369 aa19.79■□□□□ 0.76
SND1-209ENST00000470723 LRRC9Q6ZRR7 1453 aa19.78■□□□□ 0.76
SND1-209ENST00000470723 CFAP43Q8NDM7 1665 aa19.78■□□□□ 0.76
SND1-209ENST00000470723 ABCA9Q8IUA7 1624 aa19.77■□□□□ 0.76
SND1-209ENST00000470723 CD109Q6YHK3 1445 aa19.76■□□□□ 0.75
SND1-209ENST00000470723 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.76■□□□□ 0.752e-6■■■■□ 24.9
SND1-209ENST00000470723 MAP3K4Q9Y6R4 1608 aa19.75■□□□□ 0.75
SND1-209ENST00000470723 ILDR1Q86SU0 546 aaPredicted RBP19.74■□□□□ 0.75
SND1-209ENST00000470723 EHBP1L1Q8N3D4 1523 aa19.72■□□□□ 0.75
SND1-209ENST00000470723 PLCH2O75038 1416 aa19.71■□□□□ 0.75
SND1-209ENST00000470723 KIF14Q15058 1648 aa19.71■□□□□ 0.75
SND1-209ENST00000470723 PHLDB1Q86UU1 1377 aa19.68■□□□□ 0.74
SND1-209ENST00000470723 ARAP3Q8WWN8 1544 aa19.67■□□□□ 0.74
SND1-209ENST00000470723 GPATCH8Q9UKJ3 1502 aaKnown RBP19.66■□□□□ 0.74
SND1-209ENST00000470723 TTC37Q6PGP7 1564 aa19.66■□□□□ 0.74
SND1-209ENST00000470723 PPRC1Q5VV67 1664 aaKnown RBP19.66■□□□□ 0.74
SND1-209ENST00000470723 NCOA2Q15596 1464 aa19.66■□□□□ 0.74
SND1-209ENST00000470723 EFCAB2Q5VUJ9 269 aa19.65■□□□□ 0.74
SND1-209ENST00000470723 SUPT6HQ7KZ85 1726 aaKnown RBP19.65■□□□□ 0.74
SND1-209ENST00000470723 TEX14Q8IWB6 1497 aa19.64■□□□□ 0.73
SND1-209ENST00000470723 TSPOAP1O95153 1857 aa19.63■□□□□ 0.73
SND1-209ENST00000470723 CCNB3Q8WWL7 1395 aa19.63■□□□□ 0.73
SND1-209ENST00000470723 NEO1Q92859 1461 aa19.61■□□□□ 0.73
SND1-209ENST00000470723 CDC42BPAQ5VT25 1732 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms