RNA–Protein interactions for RNA: ENST00000470179.5

PGAP1-208, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2

Gene PGAP1, Length 2,874 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-208ENST00000470179 DIEXFQ68CQ4 756 aaKnown RBP25.62■■□□□ 1.69
PGAP1-208ENST00000470179 CARMIL1Q5VZK9 1371 aa25.61■■□□□ 1.69
PGAP1-208ENST00000470179 ADAMTS12P58397 1594 aa25.6■■□□□ 1.69
PGAP1-208ENST00000470179 FHAD1B1AJZ9 1412 aa25.59■■□□□ 1.69
PGAP1-208ENST00000470179 SNAPC4Q5SXM2 1469 aa25.57■■□□□ 1.68
PGAP1-208ENST00000470179 RAPGEF2Q9Y4G8 1499 aa25.56■■□□□ 1.68
PGAP1-208ENST00000470179 GOLGA3Q08378 1498 aa25.52■■□□□ 1.68
PGAP1-208ENST00000470179 SYNJ2O15056 1496 aa25.5■■□□□ 1.67
PGAP1-208ENST00000470179 GRIN2AQ12879 1464 aa25.41■■□□□ 1.66
PGAP1-208ENST00000470179 TNIKQ9UKE5 1360 aa25.37■■□□□ 1.65
PGAP1-208ENST00000470179 CHD1O14646 1710 aa25.33■■□□□ 1.65
PGAP1-208ENST00000470179 CHMP7Q8WUX9 453 aaPredicted RBP25.33■■□□□ 1.64
PGAP1-208ENST00000470179 NUP160Q12769 1436 aa25.31■■□□□ 1.64
PGAP1-208ENST00000470179 CTTNBP2Q8WZ74 1663 aa25.3■■□□□ 1.64
PGAP1-208ENST00000470179 RANGAP1P46060 587 aaPredicted RBP25.29■■□□□ 1.64
PGAP1-208ENST00000470179 CENPBP07199 599 aaPredicted RBP25.26■■□□□ 1.63
PGAP1-208ENST00000470179 CEP170Q5SW79 1584 aa25.26■■□□□ 1.63
PGAP1-208ENST00000470179 UBTFP17480 764 aaKnown RBP25.26■■□□□ 1.63
PGAP1-208ENST00000470179 HNRNPUL2Q1KMD3 747 aaKnown RBP25.25■■□□□ 1.63
PGAP1-208ENST00000470179 KIAA0586Q9BVV6 1533 aa25.23■■□□□ 1.63
PGAP1-208ENST00000470179 FBLN2P98095 1184 aa25.19■■□□□ 1.62
PGAP1-208ENST00000470179 IQGAP2Q13576 1575 aa25.17■■□□□ 1.62
PGAP1-208ENST00000470179 MIER1Q8N108 512 aa25.16■■□□□ 1.62
PGAP1-208ENST00000470179 CLASP1Q7Z460 1538 aa25.13■■□□□ 1.61
PGAP1-208ENST00000470179 CEP162Q5TB80 1403 aa25.11■■□□□ 1.61
PGAP1-208ENST00000470179 UGGT2Q9NYU1 1516 aa25.11■■□□□ 1.61
PGAP1-208ENST00000470179 ZNF316A6NFI3 1004 aaPredicted RBP25.08■■□□□ 1.61
PGAP1-208ENST00000470179 SHROOM2Q13796 1616 aa25.07■■□□□ 1.6
PGAP1-208ENST00000470179 EFCAB5A4FU69 1503 aa25.06■■□□□ 1.6
PGAP1-208ENST00000470179 CLIP1P30622 1438 aa25.05■■□□□ 1.6
PGAP1-208ENST00000470179 SAMD9Q5K651 1589 aa25.05■■□□□ 1.6
PGAP1-208ENST00000470179 OSCARQ8IYS5 282 aa25.02■■□□□ 1.6
PGAP1-208ENST00000470179 ARHGAP35Q9NRY4 1499 aa25■■□□□ 1.59
PGAP1-208ENST00000470179 JPH4Q96JJ6 628 aa24.97■■□□□ 1.59
PGAP1-208ENST00000470179 DISP1Q96F81 1524 aa24.96■■□□□ 1.59
PGAP1-208ENST00000470179 KIAA0556O60303 1618 aa24.93■■□□□ 1.58
PGAP1-208ENST00000470179 ARAP1Q96P48 1450 aa24.91■■□□□ 1.58
PGAP1-208ENST00000470179 CARMIL2Q6F5E8 1435 aa24.89■■□□□ 1.58
PGAP1-208ENST00000470179 PRG4Q92954 1404 aaPredicted RBP24.87■■□□□ 1.57
PGAP1-208ENST00000470179 FHOD3Q2V2M9 1422 aa24.81■■□□□ 1.56
PGAP1-208ENST00000470179 VPS8Q8N3P4 1428 aa24.8■■□□□ 1.56
PGAP1-208ENST00000470179 FMN1Q68DA7 1419 aa24.78■■□□□ 1.56
PGAP1-208ENST00000470179 ERCC6L2Q5T890 1561 aa24.77■■□□□ 1.56
PGAP1-208ENST00000470179 P3H3Q8IVL6 736 aa24.73■■□□□ 1.55
PGAP1-208ENST00000470179 CASKIN1Q8WXD9 1431 aa24.68■■□□□ 1.54
PGAP1-208ENST00000470179 PTPRGP23470 1445 aa24.66■■□□□ 1.54
PGAP1-208ENST00000470179 FYCO1Q9BQS8 1478 aa24.66■■□□□ 1.54
PGAP1-208ENST00000470179 ARHGEF11O15085 1522 aa24.65■■□□□ 1.54
PGAP1-208ENST00000470179 PCF11O94913 1555 aaKnown RBP24.64■■□□□ 1.54
PGAP1-208ENST00000470179 ABCA8O94911 1581 aa24.64■■□□□ 1.53
PGAP1-208ENST00000470179 RAPGEF6Q8TEU7 1601 aa24.61■■□□□ 1.53
PGAP1-208ENST00000470179 MAP3K1Q13233 1512 aa24.59■■□□□ 1.53
PGAP1-208ENST00000470179 HECW1Q76N89 1606 aa24.58■■□□□ 1.53
PGAP1-208ENST00000470179 RIMBP3CA6NJZ7 1639 aa24.58■■□□□ 1.52
PGAP1-208ENST00000470179 RIMBP3BA6NNM3 1639 aa24.58■■□□□ 1.52
PGAP1-208ENST00000470179 RIMBP3Q9UFD9 1639 aa24.58■■□□□ 1.52
PGAP1-208ENST00000470179 UHRF1BP1LA0JNW5 1464 aa24.57■■□□□ 1.52
PGAP1-208ENST00000470179 PLB1Q6P1J6 1458 aa24.56■■□□□ 1.52
PGAP1-208ENST00000470179 UACAQ9BZF9 1416 aa24.55■■□□□ 1.52
PGAP1-208ENST00000470179 ITGAEP38570 1179 aa24.55■■□□□ 1.52
PGAP1-208ENST00000470179 KCNH8Q96L42 1107 aa24.55■■□□□ 1.52
PGAP1-208ENST00000470179 NUP153P49790 1475 aaKnown RBP24.53■■□□□ 1.52
PGAP1-208ENST00000470179 APLP2Q06481 763 aa24.52■■□□□ 1.52
PGAP1-208ENST00000470179 ABCC2Q92887 1545 aa24.52■■□□□ 1.52
PGAP1-208ENST00000470179 LRRIQ1Q96JM4 1722 aa24.52■■□□□ 1.52
PGAP1-208ENST00000470179 CCDC18Q5T9S5 1454 aa24.51■■□□□ 1.51
PGAP1-208ENST00000470179 CFAP43Q8NDM7 1665 aa24.49■■□□□ 1.51
PGAP1-208ENST00000470179 EPRSP07814 1512 aaKnown RBP24.48■■□□□ 1.51
PGAP1-208ENST00000470179 TIAM1Q13009 1591 aa24.47■■□□□ 1.51
PGAP1-208ENST00000470179 BCANQ96GW7 911 aa24.47■■□□□ 1.51
PGAP1-208ENST00000470179 SUPT16HQ9Y5B9 1047 aaKnown RBP24.44■■□□□ 1.5
PGAP1-208ENST00000470179 ADCY10Q96PN6 1610 aa24.44■■□□□ 1.5
PGAP1-208ENST00000470179 KDM5BQ9UGL1 1544 aa24.42■■□□□ 1.5
PGAP1-208ENST00000470179 KANK4Q5T7N3 995 aaPredicted RBP24.4■■□□□ 1.5
PGAP1-208ENST00000470179 ATP10BO94823 1461 aa24.4■■□□□ 1.5
PGAP1-208ENST00000470179 CDK13Q14004 1512 aaKnown RBP24.37■■□□□ 1.49
PGAP1-208ENST00000470179 LRRC9Q6ZRR7 1453 aa24.35■■□□□ 1.49
PGAP1-208ENST00000470179 DNAJC5Q9H3Z4 198 aa24.34■■□□□ 1.49
PGAP1-208ENST00000470179 ATP1B4Q9UN42 357 aaPredicted RBP24.34■■□□□ 1.49
PGAP1-208ENST00000470179 ZCCHC11Q5TAX3 1644 aaKnown RBP24.34■■□□□ 1.49
PGAP1-208ENST00000470179 EHBP1L1Q8N3D4 1523 aa24.3■■□□□ 1.48
PGAP1-208ENST00000470179 MAGI3Q5TCQ9 1506 aa24.3■■□□□ 1.48
PGAP1-208ENST00000470179 HIRIP3Q9BW71 556 aaPredicted RBP24.28■■□□□ 1.48
PGAP1-208ENST00000470179 CDK11AQ9UQ88 783 aaPredicted RBP24.28■■□□□ 1.48
PGAP1-208ENST00000470179 MYT1Q01538 1121 aa24.27■■□□□ 1.48
PGAP1-208ENST00000470179 CYB5RLQ6IPT4 315 aa24.27■■□□□ 1.48
PGAP1-208ENST00000470179 TROQ12816 1431 aaPredicted RBP24.25■■□□□ 1.47
PGAP1-208ENST00000470179 DHX57Q6P158 1386 aaKnown RBP24.24■■□□□ 1.47
PGAP1-208ENST00000470179 MTUS2Q5JR59 1369 aa24.23■■□□□ 1.47
PGAP1-208ENST00000470179 TSHZ2Q9NRE2 1034 aa24.23■■□□□ 1.47
PGAP1-208ENST00000470179 PLEKHD1A6NEE1 506 aa24.2■■□□□ 1.46
PGAP1-208ENST00000470179 SUPT6HQ7KZ85 1726 aaKnown RBP24.19■■□□□ 1.46
PGAP1-208ENST00000470179 MAPKBP1O60336 1514 aa24.19■■□□□ 1.46
PGAP1-208ENST00000470179 ARID3CA6NKF2 412 aa24.19■■□□□ 1.46
PGAP1-208ENST00000470179 NPM1P06748 294 aaKnown RBP eCLIP24.17■■□□□ 1.46
PGAP1-208ENST00000470179 WDR7Q9Y4E6 1490 aa24.15■■□□□ 1.46
PGAP1-208ENST00000470179 ASXL2Q76L83 1435 aa24.13■■□□□ 1.45
PGAP1-208ENST00000470179 NCOA2Q15596 1464 aa24.13■■□□□ 1.45
PGAP1-208ENST00000470179 KIF14Q15058 1648 aa24.13■■□□□ 1.45
PGAP1-208ENST00000470179 ABCC10Q5T3U5 1492 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms