RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 AQRO60306 1485 aaKnown RBP eCLIP12.1□□□□□ -0.471e-7■■■■□ 19.5
MSL3-210ENST00000468149 HAP1P54257 671 aaPredicted RBP12.1□□□□□ -0.47
MSL3-210ENST00000468149 ABCA5Q8WWZ7 1642 aa12.1□□□□□ -0.47
MSL3-210ENST00000468149 FOXD4L1Q9NU39 408 aa12.09□□□□□ -0.47
MSL3-210ENST00000468149 CHD1O14646 1710 aa12.07□□□□□ -0.48
MSL3-210ENST00000468149 TDRD9Q8NDG6 1382 aaKnown RBP12.06□□□□□ -0.48
MSL3-210ENST00000468149 GAPVD1Q14C86 1478 aa12.05□□□□□ -0.48
MSL3-210ENST00000468149 DMRT2Q9Y5R5 561 aa12.04□□□□□ -0.48
MSL3-210ENST00000468149 GRIN2BQ13224 1484 aa12.04□□□□□ -0.48
MSL3-210ENST00000468149 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
MSL3-210ENST00000468149 TULP1O00294 542 aaPredicted RBP12□□□□□ -0.49
MSL3-210ENST00000468149 SNAPC4Q5SXM2 1469 aa12□□□□□ -0.49
MSL3-210ENST00000468149 OSCARQ8IYS5 282 aa12□□□□□ -0.49
MSL3-210ENST00000468149 RNF216Q9NWF9 866 aaPredicted RBP12□□□□□ -0.49
MSL3-210ENST00000468149 ERICH3Q5RHP9 1530 aa11.99□□□□□ -0.49
MSL3-210ENST00000468149 SYNJ2O15056 1496 aa11.97□□□□□ -0.49
MSL3-210ENST00000468149 VSIG10Q8N0Z9 540 aa11.96□□□□□ -0.5
MSL3-210ENST00000468149 ADAMTS12P58397 1594 aa11.95□□□□□ -0.5
MSL3-210ENST00000468149 KIF27Q86VH2 1401 aa11.93□□□□□ -0.5
MSL3-210ENST00000468149 CUL7Q14999 1698 aa11.92□□□□□ -0.5
MSL3-210ENST00000468149 FBLN2P98095 1184 aa11.91□□□□□ -0.5
MSL3-210ENST00000468149 CHMP7Q8WUX9 453 aaPredicted RBP11.91□□□□□ -0.5
MSL3-210ENST00000468149 FHAD1B1AJZ9 1412 aa11.91□□□□□ -0.5
MSL3-210ENST00000468149 HOMEZQ8IX15 550 aa11.89□□□□□ -0.51
MSL3-210ENST00000468149 GRIN2AQ12879 1464 aa11.89□□□□□ -0.51
MSL3-210ENST00000468149 HOXD11P31277 338 aaPredicted RBP11.89□□□□□ -0.51
MSL3-210ENST00000468149 CLASP1Q7Z460 1538 aa11.89□□□□□ -0.51
MSL3-210ENST00000468149 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
MSL3-210ENST00000468149 IGF1RP08069 1367 aa11.85□□□□□ -0.51
MSL3-210ENST00000468149 RIMBP3CA6NJZ7 1639 aa11.85□□□□□ -0.51
MSL3-210ENST00000468149 RIMBP3BA6NNM3 1639 aa11.85□□□□□ -0.51
MSL3-210ENST00000468149 RIMBP3Q9UFD9 1639 aa11.85□□□□□ -0.51
MSL3-210ENST00000468149 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
MSL3-210ENST00000468149 CEP170Q5SW79 1584 aa11.84□□□□□ -0.51
MSL3-210ENST00000468149 NUP160Q12769 1436 aa11.84□□□□□ -0.51
MSL3-210ENST00000468149 ARHGEF11O15085 1522 aa11.83□□□□□ -0.52
MSL3-210ENST00000468149 GTF3C3Q9Y5Q9 886 aa11.82□□□□□ -0.52
MSL3-210ENST00000468149 SHROOM2Q13796 1616 aa11.81□□□□□ -0.52
MSL3-210ENST00000468149 RUSC2Q8N2Y8 1516 aa11.8□□□□□ -0.52
MSL3-210ENST00000468149 CARMIL1Q5VZK9 1371 aa11.79□□□□□ -0.52
MSL3-210ENST00000468149 RAPGEF2Q9Y4G8 1499 aa11.75□□□□□ -0.53
MSL3-210ENST00000468149 EEA1Q15075 1411 aa11.74□□□□□ -0.53
MSL3-210ENST00000468149 CTTNBP2Q8WZ74 1663 aa11.74□□□□□ -0.53
MSL3-210ENST00000468149 KIAA0586Q9BVV6 1533 aa11.74□□□□□ -0.53
MSL3-210ENST00000468149 ARAP1Q96P48 1450 aa11.71□□□□□ -0.53
MSL3-210ENST00000468149 PRXQ9BXM0 1461 aa11.71□□□□□ -0.53
MSL3-210ENST00000468149 IQGAP2Q13576 1575 aa11.7□□□□□ -0.54
MSL3-210ENST00000468149 ERCC6L2Q5T890 1561 aa11.69□□□□□ -0.54
MSL3-210ENST00000468149 RANGAP1P46060 587 aaPredicted RBP11.68□□□□□ -0.54
MSL3-210ENST00000468149 JPH4Q96JJ6 628 aa11.68□□□□□ -0.54
MSL3-210ENST00000468149 PRG4Q92954 1404 aaPredicted RBP11.66□□□□□ -0.54
MSL3-210ENST00000468149 KDM2AQ9Y2K7 1162 aa11.66□□□□□ -0.54
MSL3-210ENST00000468149 KIF21BO75037 1637 aa11.65□□□□□ -0.54
MSL3-210ENST00000468149 CYB5RLQ6IPT4 315 aa11.65□□□□□ -0.54
MSL3-210ENST00000468149 UGGT2Q9NYU1 1516 aa11.62□□□□□ -0.55
MSL3-210ENST00000468149 CARMIL2Q6F5E8 1435 aa11.6□□□□□ -0.55
MSL3-210ENST00000468149 KIAA0556O60303 1618 aa11.59□□□□□ -0.55
MSL3-210ENST00000468149 DISP1Q96F81 1524 aa11.58□□□□□ -0.55
MSL3-210ENST00000468149 FAM9AQ8IZU1 332 aaPredicted RBP11.57□□□□□ -0.56
MSL3-210ENST00000468149 TMEM132AQ24JP5 1023 aa11.57□□□□□ -0.56
MSL3-210ENST00000468149 GOLGA3Q08378 1498 aa11.56□□□□□ -0.56
MSL3-210ENST00000468149 ATXN8OSP0DMR3 200 aa11.54□□□□□ -0.56
MSL3-210ENST00000468149 TNIKQ9UKE5 1360 aa11.54□□□□□ -0.56
MSL3-210ENST00000468149 ADCY10Q96PN6 1610 aa11.54□□□□□ -0.56
MSL3-210ENST00000468149 SAMD9Q5K651 1589 aa11.53□□□□□ -0.56
MSL3-210ENST00000468149 PTPRGP23470 1445 aa11.52□□□□□ -0.57
MSL3-210ENST00000468149 UHRF1BP1LA0JNW5 1464 aa11.48□□□□□ -0.57
MSL3-210ENST00000468149 EFCAB5A4FU69 1503 aa11.48□□□□□ -0.57
MSL3-210ENST00000468149 MAPKBP1O60336 1514 aa11.47□□□□□ -0.57
MSL3-210ENST00000468149 ABCC2Q92887 1545 aa11.47□□□□□ -0.57
MSL3-210ENST00000468149 KIF13AQ9H1H9 1805 aa11.47□□□□□ -0.57
MSL3-210ENST00000468149 SLC4A2P04920 1241 aa11.47□□□□□ -0.57
MSL3-210ENST00000468149 C14orf37Q86TY3 774 aa11.47□□□□□ -0.57
MSL3-210ENST00000468149 UACAQ9BZF9 1416 aa11.46□□□□□ -0.57
MSL3-210ENST00000468149 DCAF8L1A6NGE4 600 aa11.46□□□□□ -0.57
MSL3-210ENST00000468149 PODXL2Q9NZ53 605 aa11.46□□□□□ -0.57
MSL3-210ENST00000468149 UBTFP17480 764 aaKnown RBP11.45□□□□□ -0.58
MSL3-210ENST00000468149 ABCA8O94911 1581 aa11.45□□□□□ -0.58
MSL3-210ENST00000468149 ZCCHC11Q5TAX3 1644 aaKnown RBP11.43□□□□□ -0.58
MSL3-210ENST00000468149 NPM1P06748 294 aaKnown RBP eCLIP11.43□□□□□ -0.58
MSL3-210ENST00000468149 KDM5BQ9UGL1 1544 aa11.43□□□□□ -0.58
MSL3-210ENST00000468149 TTBK1Q5TCY1 1321 aaPredicted RBP11.42□□□□□ -0.58
MSL3-210ENST00000468149 PLB1Q6P1J6 1458 aa11.42□□□□□ -0.58
MSL3-210ENST00000468149 RAPGEF6Q8TEU7 1601 aa11.41□□□□□ -0.58
MSL3-210ENST00000468149 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.4□□□□□ -0.58
MSL3-210ENST00000468149 DIP2BQ9P265 1576 aa11.39□□□□□ -0.59
MSL3-210ENST00000468149 TRHP20396 242 aaPredicted RBP11.39□□□□□ -0.59
MSL3-210ENST00000468149 ABCC10Q5T3U5 1492 aa11.38□□□□□ -0.59
MSL3-210ENST00000468149 ARHGAP35Q9NRY4 1499 aa11.38□□□□□ -0.59
MSL3-210ENST00000468149 FHOD3Q2V2M9 1422 aa11.38□□□□□ -0.59
MSL3-210ENST00000468149 P3H3Q8IVL6 736 aa11.38□□□□□ -0.59
MSL3-210ENST00000468149 ASXL2Q76L83 1435 aa11.36□□□□□ -0.59
MSL3-210ENST00000468149 BBXQ8WY36 941 aaPredicted RBP11.35□□□□□ -0.59
MSL3-210ENST00000468149 FMN1Q68DA7 1419 aa11.34□□□□□ -0.59
MSL3-210ENST00000468149 GLI2P10070 1586 aa11.34□□□□□ -0.59
MSL3-210ENST00000468149 TSPOAP1O95153 1857 aa11.34□□□□□ -0.59
MSL3-210ENST00000468149 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
MSL3-210ENST00000468149 NUP153P49790 1475 aaKnown RBP11.33□□□□□ -0.6
MSL3-210ENST00000468149 FBXO3Q9UK99 471 aa11.32□□□□□ -0.6
MSL3-210ENST00000468149 HECW1Q76N89 1606 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms