RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 KIF27Q86VH2 1401 aa30.25■■■□□ 2.43
TRIM56-203ENST00000467847 IGF1RP08069 1367 aa30.22■■■□□ 2.43
TRIM56-203ENST00000467847 CUL7Q14999 1698 aa30.22■■■□□ 2.43
TRIM56-203ENST00000467847 KIAA0586Q9BVV6 1533 aa30.15■■■□□ 2.42
TRIM56-203ENST00000467847 KIF13AQ9H1H9 1805 aa30.15■■■□□ 2.42
TRIM56-203ENST00000467847 NPM1P06748 294 aaKnown RBP eCLIP30.05■■■□□ 2.4
TRIM56-203ENST00000467847 ADCY10Q96PN6 1610 aa30.04■■■□□ 2.4
TRIM56-203ENST00000467847 CARMIL1Q5VZK9 1371 aa30.03■■■□□ 2.4
TRIM56-203ENST00000467847 MAPKBP1O60336 1514 aa30■■■□□ 2.39
TRIM56-203ENST00000467847 ABCC10Q5T3U5 1492 aa29.97■■■□□ 2.39
TRIM56-203ENST00000467847 FAM69CQ0P6D2 419 aa29.96■■■□□ 2.39
TRIM56-203ENST00000467847 DIP2BQ9P265 1576 aa29.91■■■□□ 2.38
TRIM56-203ENST00000467847 PTPRGP23470 1445 aa29.88■■■□□ 2.37
TRIM56-203ENST00000467847 IQGAP2Q13576 1575 aa29.88■■■□□ 2.37
TRIM56-203ENST00000467847 CARMIL2Q6F5E8 1435 aa29.87■■■□□ 2.37
TRIM56-203ENST00000467847 TTBK1Q5TCY1 1321 aaPredicted RBP29.85■■■□□ 2.37
TRIM56-203ENST00000467847 TNIKQ9UKE5 1360 aa29.82■■■□□ 2.36
TRIM56-203ENST00000467847 RAPGEF2Q9Y4G8 1499 aa29.76■■■□□ 2.35
TRIM56-203ENST00000467847 TSPOAP1O95153 1857 aa29.75■■■□□ 2.35
TRIM56-203ENST00000467847 ABCC2Q92887 1545 aa29.74■■■□□ 2.35
TRIM56-203ENST00000467847 DISP1Q96F81 1524 aa29.72■■■□□ 2.35
TRIM56-203ENST00000467847 KDM6BO15054 1643 aa29.71■■■□□ 2.35
TRIM56-203ENST00000467847 KDM4FA0A1W2PPD8 638 aa29.69■■■□□ 2.34
TRIM56-203ENST00000467847 UGGT2Q9NYU1 1516 aa29.67■■■□□ 2.34
TRIM56-203ENST00000467847 UHRF1BP1LA0JNW5 1464 aa29.67■■■□□ 2.34
TRIM56-203ENST00000467847 UACAQ9BZF9 1416 aa29.65■■■□□ 2.34
TRIM56-203ENST00000467847 ASXL2Q76L83 1435 aa29.64■■■□□ 2.34
TRIM56-203ENST00000467847 PLB1Q6P1J6 1458 aa29.62■■■□□ 2.33
TRIM56-203ENST00000467847 KIAA0556O60303 1618 aa29.6■■■□□ 2.33
TRIM56-203ENST00000467847 CTTNBP2Q8WZ74 1663 aa29.57■■■□□ 2.32
TRIM56-203ENST00000467847 GLI2P10070 1586 aa29.56■■■□□ 2.32
TRIM56-203ENST00000467847 KDM5BQ9UGL1 1544 aa29.54■■■□□ 2.32
TRIM56-203ENST00000467847 ILDR1Q86SU0 546 aaPredicted RBP29.52■■■□□ 2.32
TRIM56-203ENST00000467847 PPRC1Q5VV67 1664 aaKnown RBP29.51■■■□□ 2.31
TRIM56-203ENST00000467847 ZCCHC11Q5TAX3 1644 aaKnown RBP29.51■■■□□ 2.31
TRIM56-203ENST00000467847 EPRSP07814 1512 aaKnown RBP29.45■■■□□ 2.31
TRIM56-203ENST00000467847 GOLGA3Q08378 1498 aa29.44■■■□□ 2.3
TRIM56-203ENST00000467847 PRXQ9BXM0 1461 aa29.42■■■□□ 2.3
TRIM56-203ENST00000467847 MAP3K4Q9Y6R4 1608 aa29.42■■■□□ 2.3
TRIM56-203ENST00000467847 WDR7Q9Y4E6 1490 aa29.35■■■□□ 2.29
TRIM56-203ENST00000467847 TEX14Q8IWB6 1497 aa29.34■■■□□ 2.29
TRIM56-203ENST00000467847 ABCA8O94911 1581 aa29.33■■■□□ 2.29
TRIM56-203ENST00000467847 ADGRL1O94910 1474 aa29.32■■■□□ 2.28
TRIM56-203ENST00000467847 COL17A1Q9UMD9 1497 aaPredicted RBP29.27■■■□□ 2.28
TRIM56-203ENST00000467847 CFAP43Q8NDM7 1665 aa29.2■■■□□ 2.26
TRIM56-203ENST00000467847 CSRNP3Q8WYN3 585 aa29.19■■■□□ 2.26
TRIM56-203ENST00000467847 KCNH8Q96L42 1107 aa29.19■■■□□ 2.26
TRIM56-203ENST00000467847 FAM9AQ8IZU1 332 aaPredicted RBP29.18■■■□□ 2.26
TRIM56-203ENST00000467847 P3H3Q8IVL6 736 aa29.17■■■□□ 2.26
TRIM56-203ENST00000467847 CD109Q6YHK3 1445 aa29.17■■■□□ 2.26
TRIM56-203ENST00000467847 MAGI3Q5TCQ9 1506 aa29.14■■■□□ 2.25
TRIM56-203ENST00000467847 SAMD9Q5K651 1589 aa29.11■■■□□ 2.25
TRIM56-203ENST00000467847 HECW2Q9P2P5 1572 aa29.11■■■□□ 2.25
TRIM56-203ENST00000467847 ARID3CA6NKF2 412 aa29.11■■■□□ 2.25
TRIM56-203ENST00000467847 ATP10BO94823 1461 aa29.07■■■□□ 2.24
TRIM56-203ENST00000467847 EEA1Q15075 1411 aa29.06■■■□□ 2.24
TRIM56-203ENST00000467847 RAPGEF6Q8TEU7 1601 aa29.02■■■□□ 2.24
TRIM56-203ENST00000467847 RANGAP1P46060 587 aaPredicted RBP28.97■■■□□ 2.23
TRIM56-203ENST00000467847 ABCA9Q8IUA7 1624 aa28.96■■■□□ 2.23
TRIM56-203ENST00000467847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.92■■■□□ 2.22
TRIM56-203ENST00000467847 HNRNPUL2Q1KMD3 747 aaKnown RBP28.92■■■□□ 2.22
TRIM56-203ENST00000467847 ARAP3Q8WWN8 1544 aa28.92■■■□□ 2.22
TRIM56-203ENST00000467847 FHOD3Q2V2M9 1422 aa28.91■■■□□ 2.22
TRIM56-203ENST00000467847 NUP153P49790 1475 aaKnown RBP28.9■■■□□ 2.22
TRIM56-203ENST00000467847 KIF21BO75037 1637 aa28.87■■■□□ 2.21
TRIM56-203ENST00000467847 PHLDB1Q86UU1 1377 aa28.85■■■□□ 2.21
TRIM56-203ENST00000467847 EFCAB5A4FU69 1503 aa28.82■■■□□ 2.2
TRIM56-203ENST00000467847 NEO1Q92859 1461 aa28.8■■■□□ 2.2
TRIM56-203ENST00000467847 FBXO41Q8TF61 875 aa28.77■■■□□ 2.2
TRIM56-203ENST00000467847 RAPGEF3O95398 923 aa28.75■■■□□ 2.19
TRIM56-203ENST00000467847 PLEKHD1A6NEE1 506 aa28.74■■■□□ 2.19
TRIM56-203ENST00000467847 FRMPD1Q5SYB0 1578 aa28.7■■■□□ 2.18
TRIM56-203ENST00000467847 EHMT2Q96KQ7 1210 aa28.67■■■□□ 2.18
TRIM56-203ENST00000467847 UBTFP17480 764 aaKnown RBP28.65■■■□□ 2.18
TRIM56-203ENST00000467847 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.64■■■□□ 2.18
TRIM56-203ENST00000467847 CFAP74Q9C0B2 1584 aa28.63■■■□□ 2.17
TRIM56-203ENST00000467847 CDK13Q14004 1512 aaKnown RBP28.63■■■□□ 2.17
TRIM56-203ENST00000467847 TTC37Q6PGP7 1564 aa28.62■■■□□ 2.17
TRIM56-203ENST00000467847 FANCAO15360 1455 aa28.61■■■□□ 2.17
TRIM56-203ENST00000467847 ADAMTSL3P82987 1691 aa28.61■■■□□ 2.17
TRIM56-203ENST00000467847 RICTORQ6R327 1708 aa28.6■■■□□ 2.17
TRIM56-203ENST00000467847 AKNAQ7Z591 1439 aa28.6■■■□□ 2.17
TRIM56-203ENST00000467847 DENND4BO75064 1496 aaPredicted RBP28.59■■■□□ 2.17
TRIM56-203ENST00000467847 CHIC1Q5VXU3 224 aa28.59■■■□□ 2.17
TRIM56-203ENST00000467847 PTPRMP28827 1452 aa28.56■■■□□ 2.16
TRIM56-203ENST00000467847 ARID4BQ4LE39 1312 aaPredicted RBP28.56■■■□□ 2.16
TRIM56-203ENST00000467847 BCORL1Q5H9F3 1711 aa28.56■■■□□ 2.16
TRIM56-203ENST00000467847 ARHGEF40Q8TER5 1519 aa28.56■■■□□ 2.16
TRIM56-203ENST00000467847 FMN1Q68DA7 1419 aa28.55■■■□□ 2.16
TRIM56-203ENST00000467847 HECW1Q76N89 1606 aa28.54■■■□□ 2.16
TRIM56-203ENST00000467847 ARHGAP35Q9NRY4 1499 aa28.53■■■□□ 2.16
TRIM56-203ENST00000467847 ATP1B4Q9UN42 357 aaPredicted RBP28.53■■■□□ 2.16
TRIM56-203ENST00000467847 MADDQ8WXG6 1647 aa28.49■■■□□ 2.15
TRIM56-203ENST00000467847 ZMYM4Q5VZL5 1548 aa28.48■■■□□ 2.15
TRIM56-203ENST00000467847 PLCH2O75038 1416 aa28.45■■■□□ 2.15
TRIM56-203ENST00000467847 ZFYVE16Q7Z3T8 1539 aa28.43■■■□□ 2.14
TRIM56-203ENST00000467847 CDK11AQ9UQ88 783 aaPredicted RBP28.43■■■□□ 2.14
TRIM56-203ENST00000467847 MYO5CQ9NQX4 1742 aa28.43■■■□□ 2.14
TRIM56-203ENST00000467847 PCF11O94913 1555 aaKnown RBP28.41■■■□□ 2.14
TRIM56-203ENST00000467847 RIMS1Q86UR5 1692 aaKnown RBP28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms