RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 NUP160Q12769 1436 aa17.34■□□□□ 0.37
NUP188-204ENST00000467044 OSCARQ8IYS5 282 aa17.34■□□□□ 0.37
NUP188-204ENST00000467044 CTTNBP2Q8WZ74 1663 aa17.34■□□□□ 0.37
NUP188-204ENST00000467044 TNIKQ9UKE5 1360 aa17.34■□□□□ 0.37
NUP188-204ENST00000467044 KIAA0586Q9BVV6 1533 aa17.31■□□□□ 0.36
NUP188-204ENST00000467044 IQGAP2Q13576 1575 aa17.28■□□□□ 0.36
NUP188-204ENST00000467044 JPH4Q96JJ6 628 aa17.25■□□□□ 0.35
NUP188-204ENST00000467044 CLASP1Q7Z460 1538 aa17.23■□□□□ 0.35
NUP188-204ENST00000467044 CEP162Q5TB80 1403 aa17.21■□□□□ 0.34
NUP188-204ENST00000467044 P3H3Q8IVL6 736 aa17.19■□□□□ 0.34
NUP188-204ENST00000467044 CLIP1P30622 1438 aa17.19■□□□□ 0.34
NUP188-204ENST00000467044 UGGT2Q9NYU1 1516 aa17.17■□□□□ 0.34
NUP188-204ENST00000467044 PRG4Q92954 1404 aaPredicted RBP17.15■□□□□ 0.34
NUP188-204ENST00000467044 SHROOM2Q13796 1616 aa17.15■□□□□ 0.34
NUP188-204ENST00000467044 CARMIL2Q6F5E8 1435 aa17.13■□□□□ 0.33
NUP188-204ENST00000467044 TTBK1Q5TCY1 1321 aaPredicted RBP17.13■□□□□ 0.33
NUP188-204ENST00000467044 ARHGAP35Q9NRY4 1499 aa17.12■□□□□ 0.33
NUP188-204ENST00000467044 EFCAB5A4FU69 1503 aa17.12■□□□□ 0.33
NUP188-204ENST00000467044 DISP1Q96F81 1524 aa17.11■□□□□ 0.33
NUP188-204ENST00000467044 SAMD9Q5K651 1589 aa17.11■□□□□ 0.33
NUP188-204ENST00000467044 KIAA0556O60303 1618 aa17.1■□□□□ 0.33
NUP188-204ENST00000467044 FHOD3Q2V2M9 1422 aa17.09■□□□□ 0.33
NUP188-204ENST00000467044 ERCC6L2Q5T890 1561 aa17.08■□□□□ 0.32
NUP188-204ENST00000467044 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
NUP188-204ENST00000467044 PTPRGP23470 1445 aa17.02■□□□□ 0.31
NUP188-204ENST00000467044 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
NUP188-204ENST00000467044 ATP1B4Q9UN42 357 aaPredicted RBP16.99■□□□□ 0.31
NUP188-204ENST00000467044 FMN1Q68DA7 1419 aa16.98■□□□□ 0.31
NUP188-204ENST00000467044 RIMBP3CA6NJZ7 1639 aa16.98■□□□□ 0.31
NUP188-204ENST00000467044 RIMBP3BA6NNM3 1639 aa16.98■□□□□ 0.31
NUP188-204ENST00000467044 RIMBP3Q9UFD9 1639 aa16.98■□□□□ 0.31
NUP188-204ENST00000467044 VPS8Q8N3P4 1428 aa16.96■□□□□ 0.3
NUP188-204ENST00000467044 CYB5RLQ6IPT4 315 aa16.92■□□□□ 0.3
NUP188-204ENST00000467044 DNAJC5Q9H3Z4 198 aa16.92■□□□□ 0.3
NUP188-204ENST00000467044 PLB1Q6P1J6 1458 aa16.92■□□□□ 0.3
NUP188-204ENST00000467044 PCF11O94913 1555 aaKnown RBP16.89■□□□□ 0.3
NUP188-204ENST00000467044 RAPGEF6Q8TEU7 1601 aa16.89■□□□□ 0.29
NUP188-204ENST00000467044 CASKIN1Q8WXD9 1431 aa16.89■□□□□ 0.29
NUP188-204ENST00000467044 UACAQ9BZF9 1416 aa16.89■□□□□ 0.29
NUP188-204ENST00000467044 ARID3CA6NKF2 412 aa16.89■□□□□ 0.29
NUP188-204ENST00000467044 ABCA8O94911 1581 aa16.88■□□□□ 0.29
NUP188-204ENST00000467044 APLP2Q06481 763 aa16.87■□□□□ 0.29
NUP188-204ENST00000467044 FYCO1Q9BQS8 1478 aa16.86■□□□□ 0.29
NUP188-204ENST00000467044 HECW1Q76N89 1606 aa16.85■□□□□ 0.29
NUP188-204ENST00000467044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.85■□□□□ 0.29
NUP188-204ENST00000467044 HNRNPUL2Q1KMD3 747 aaKnown RBP16.85■□□□□ 0.29
NUP188-204ENST00000467044 ABCC2Q92887 1545 aa16.83■□□□□ 0.28
NUP188-204ENST00000467044 NUP153P49790 1475 aaKnown RBP16.82■□□□□ 0.28
NUP188-204ENST00000467044 UHRF1BP1LA0JNW5 1464 aa16.81■□□□□ 0.28
NUP188-204ENST00000467044 ADCY10Q96PN6 1610 aa16.81■□□□□ 0.28
NUP188-204ENST00000467044 NPM1P06748 294 aaKnown RBP eCLIP16.8■□□□□ 0.28
NUP188-204ENST00000467044 EPRSP07814 1512 aaKnown RBP16.8■□□□□ 0.28
NUP188-204ENST00000467044 LRRIQ1Q96JM4 1722 aa16.79■□□□□ 0.28
NUP188-204ENST00000467044 CDK13Q14004 1512 aaKnown RBP16.78■□□□□ 0.28
NUP188-204ENST00000467044 ATP10BO94823 1461 aa16.78■□□□□ 0.28
NUP188-204ENST00000467044 CCDC18Q5T9S5 1454 aa16.77■□□□□ 0.28
NUP188-204ENST00000467044 PPARGC1BQ86YN6 1023 aaKnown RBP16.76■□□□□ 0.27
NUP188-204ENST00000467044 TIAM1Q13009 1591 aa16.74■□□□□ 0.27
NUP188-204ENST00000467044 CDK11AQ9UQ88 783 aaPredicted RBP16.74■□□□□ 0.27
NUP188-204ENST00000467044 KDM5BQ9UGL1 1544 aa16.74■□□□□ 0.27
NUP188-204ENST00000467044 ZCCHC11Q5TAX3 1644 aaKnown RBP16.74■□□□□ 0.27
NUP188-204ENST00000467044 CFAP43Q8NDM7 1665 aa16.72■□□□□ 0.27
NUP188-204ENST00000467044 MAP3K1Q13233 1512 aa16.72■□□□□ 0.27
NUP188-204ENST00000467044 PLEKHD1A6NEE1 506 aa16.72■□□□□ 0.27
NUP188-204ENST00000467044 KANK4Q5T7N3 995 aaPredicted RBP16.72■□□□□ 0.27
NUP188-204ENST00000467044 MTUS2Q5JR59 1369 aa16.7■□□□□ 0.26
NUP188-204ENST00000467044 LRRC9Q6ZRR7 1453 aa16.67■□□□□ 0.26
NUP188-204ENST00000467044 KCNH8Q96L42 1107 aa16.66■□□□□ 0.26
NUP188-204ENST00000467044 MAGI3Q5TCQ9 1506 aa16.65■□□□□ 0.26
NUP188-204ENST00000467044 ASXL2Q76L83 1435 aa16.64■□□□□ 0.25
NUP188-204ENST00000467044 TROQ12816 1431 aaPredicted RBP16.63■□□□□ 0.25
NUP188-204ENST00000467044 EHBP1L1Q8N3D4 1523 aa16.63■□□□□ 0.25
NUP188-204ENST00000467044 WDR7Q9Y4E6 1490 aa16.61■□□□□ 0.25
NUP188-204ENST00000467044 MAPKBP1O60336 1514 aa16.59■□□□□ 0.25
NUP188-204ENST00000467044 SUPT6HQ7KZ85 1726 aaKnown RBP16.59■□□□□ 0.25
NUP188-204ENST00000467044 KIF14Q15058 1648 aa16.57■□□□□ 0.24
NUP188-204ENST00000467044 NCOA2Q15596 1464 aa16.55■□□□□ 0.24
NUP188-204ENST00000467044 CCNB3Q8WWL7 1395 aa16.51■□□□□ 0.23
NUP188-204ENST00000467044 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.51■□□□□ 0.231e-6■■■■■ 29.5
NUP188-204ENST00000467044 FAM69CQ0P6D2 419 aa16.51■□□□□ 0.23
NUP188-204ENST00000467044 PHLDB1Q86UU1 1377 aa16.5■□□□□ 0.23
NUP188-204ENST00000467044 ABCC10Q5T3U5 1492 aa16.49■□□□□ 0.23
NUP188-204ENST00000467044 TTC37Q6PGP7 1564 aa16.48■□□□□ 0.23
NUP188-204ENST00000467044 TRHP20396 242 aaPredicted RBP16.47■□□□□ 0.23
NUP188-204ENST00000467044 ABCA9Q8IUA7 1624 aa16.47■□□□□ 0.23
NUP188-204ENST00000467044 DIP2BQ9P265 1576 aa16.47■□□□□ 0.23
NUP188-204ENST00000467044 MYOM3Q5VTT5 1437 aa16.45■□□□□ 0.22
NUP188-204ENST00000467044 GPATCH8Q9UKJ3 1502 aaKnown RBP16.45■□□□□ 0.22
NUP188-204ENST00000467044 CDC42BPAQ5VT25 1732 aa16.45■□□□□ 0.22
NUP188-204ENST00000467044 MYO5CQ9NQX4 1742 aa16.45■□□□□ 0.22
NUP188-204ENST00000467044 CFDP1Q9UEE9 299 aaPredicted RBP16.45■□□□□ 0.22
NUP188-204ENST00000467044 CD109Q6YHK3 1445 aa16.45■□□□□ 0.22
NUP188-204ENST00000467044 ITSN2Q9NZM3 1697 aa16.44■□□□□ 0.22
NUP188-204ENST00000467044 GLI2P10070 1586 aa16.44■□□□□ 0.22
NUP188-204ENST00000467044 ZNF777Q9ULD5 760 aaPredicted RBP16.44■□□□□ 0.22
NUP188-204ENST00000467044 KIF13AQ9H1H9 1805 aa16.43■□□□□ 0.22
NUP188-204ENST00000467044 PLCH2O75038 1416 aa16.42■□□□□ 0.22
NUP188-204ENST00000467044 CDC42BPBQ9Y5S2 1711 aa16.42■□□□□ 0.22
NUP188-204ENST00000467044 ARHGAP5Q13017 1502 aa16.41■□□□□ 0.22
NUP188-204ENST00000467044 FAM50AQ14320 339 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms