RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 AEBP2Q6ZN18 517 aaPredicted RBP33.15■■■□□ 2.9
SRSF4-202ENST00000466448 KIF27Q86VH2 1401 aa33.13■■■□□ 2.89
SRSF4-202ENST00000466448 KIAA0586Q9BVV6 1533 aa33.09■■■□□ 2.89
SRSF4-202ENST00000466448 KIF13AQ9H1H9 1805 aa33.08■■■□□ 2.89
SRSF4-202ENST00000466448 CUL7Q14999 1698 aa33.06■■■□□ 2.88
SRSF4-202ENST00000466448 NPM1P06748 294 aaKnown RBP eCLIP33.01■■■□□ 2.87
SRSF4-202ENST00000466448 ADCY10Q96PN6 1610 aa33■■■□□ 2.87
SRSF4-202ENST00000466448 ABCC10Q5T3U5 1492 aa32.99■■■□□ 2.87
SRSF4-202ENST00000466448 MAPKBP1O60336 1514 aa32.99■■■□□ 2.87
SRSF4-202ENST00000466448 FAM69CQ0P6D2 419 aa32.97■■■□□ 2.87
SRSF4-202ENST00000466448 CARMIL1Q5VZK9 1371 aa32.92■■■□□ 2.86
SRSF4-202ENST00000466448 DIP2BQ9P265 1576 aa32.9■■■□□ 2.86
SRSF4-202ENST00000466448 PTPRGP23470 1445 aa32.82■■■□□ 2.84
SRSF4-202ENST00000466448 CARMIL2Q6F5E8 1435 aa32.76■■■□□ 2.83
SRSF4-202ENST00000466448 TTBK1Q5TCY1 1321 aaPredicted RBP32.76■■■□□ 2.83
SRSF4-202ENST00000466448 TNIKQ9UKE5 1360 aa32.75■■■□□ 2.83
SRSF4-202ENST00000466448 IQGAP2Q13576 1575 aa32.74■■■□□ 2.83
SRSF4-202ENST00000466448 ABCC2Q92887 1545 aa32.68■■■□□ 2.82
SRSF4-202ENST00000466448 KDM6BO15054 1643 aa32.64■■■□□ 2.82
SRSF4-202ENST00000466448 DISP1Q96F81 1524 aa32.62■■■□□ 2.81
SRSF4-202ENST00000466448 RAPGEF2Q9Y4G8 1499 aa32.6■■■□□ 2.81
SRSF4-202ENST00000466448 UHRF1BP1LA0JNW5 1464 aa32.59■■■□□ 2.81
SRSF4-202ENST00000466448 ASXL2Q76L83 1435 aa32.59■■■□□ 2.81
SRSF4-202ENST00000466448 UACAQ9BZF9 1416 aa32.57■■■□□ 2.8
SRSF4-202ENST00000466448 TSPOAP1O95153 1857 aa32.57■■■□□ 2.8
SRSF4-202ENST00000466448 PLB1Q6P1J6 1458 aa32.55■■■□□ 2.8
SRSF4-202ENST00000466448 UGGT2Q9NYU1 1516 aa32.53■■■□□ 2.8
SRSF4-202ENST00000466448 GLI2P10070 1586 aa32.49■■■□□ 2.79
SRSF4-202ENST00000466448 KIAA0556O60303 1618 aa32.45■■■□□ 2.79
SRSF4-202ENST00000466448 KDM5BQ9UGL1 1544 aa32.45■■■□□ 2.78
SRSF4-202ENST00000466448 KDM4FA0A1W2PPD8 638 aa32.43■■■□□ 2.78
SRSF4-202ENST00000466448 PPRC1Q5VV67 1664 aaKnown RBP32.41■■■□□ 2.78
SRSF4-202ENST00000466448 EPRSP07814 1512 aaKnown RBP32.39■■■□□ 2.78
SRSF4-202ENST00000466448 ZCCHC11Q5TAX3 1644 aaKnown RBP32.35■■■□□ 2.77
SRSF4-202ENST00000466448 MAP3K4Q9Y6R4 1608 aa32.29■■■□□ 2.76
SRSF4-202ENST00000466448 CTTNBP2Q8WZ74 1663 aa32.28■■■□□ 2.76
SRSF4-202ENST00000466448 COL17A1Q9UMD9 1497 aaPredicted RBP32.27■■■□□ 2.76
SRSF4-202ENST00000466448 GOLGA3Q08378 1498 aa32.24■■■□□ 2.75
SRSF4-202ENST00000466448 PRXQ9BXM0 1461 aa32.24■■■□□ 2.75
SRSF4-202ENST00000466448 WDR7Q9Y4E6 1490 aa32.23■■■□□ 2.75
SRSF4-202ENST00000466448 TEX14Q8IWB6 1497 aa32.23■■■□□ 2.75
SRSF4-202ENST00000466448 ABCA8O94911 1581 aa32.17■■■□□ 2.74
SRSF4-202ENST00000466448 ADGRL1O94910 1474 aa32.13■■■□□ 2.73
SRSF4-202ENST00000466448 KCNH8Q96L42 1107 aa32.05■■■□□ 2.72
SRSF4-202ENST00000466448 CD109Q6YHK3 1445 aa32.05■■■□□ 2.72
SRSF4-202ENST00000466448 MAGI3Q5TCQ9 1506 aa32.04■■■□□ 2.72
SRSF4-202ENST00000466448 CFAP43Q8NDM7 1665 aa32■■■□□ 2.71
SRSF4-202ENST00000466448 P3H3Q8IVL6 736 aa31.97■■■□□ 2.71
SRSF4-202ENST00000466448 ARID3CA6NKF2 412 aa31.94■■■□□ 2.7
SRSF4-202ENST00000466448 CSRNP3Q8WYN3 585 aa31.93■■■□□ 2.7
SRSF4-202ENST00000466448 ATP10BO94823 1461 aa31.91■■■□□ 2.7
SRSF4-202ENST00000466448 FAM9AQ8IZU1 332 aaPredicted RBP31.9■■■□□ 2.7
SRSF4-202ENST00000466448 SAMD9Q5K651 1589 aa31.87■■■□□ 2.69
SRSF4-202ENST00000466448 ARAP3Q8WWN8 1544 aa31.79■■■□□ 2.68
SRSF4-202ENST00000466448 RAPGEF6Q8TEU7 1601 aa31.77■■■□□ 2.68
SRSF4-202ENST00000466448 ABCA9Q8IUA7 1624 aa31.76■■■□□ 2.67
SRSF4-202ENST00000466448 EEA1Q15075 1411 aa31.75■■■□□ 2.67
SRSF4-202ENST00000466448 HECW2Q9P2P5 1572 aa31.73■■■□□ 2.67
SRSF4-202ENST00000466448 RANGAP1P46060 587 aaPredicted RBP31.7■■■□□ 2.67
SRSF4-202ENST00000466448 KIF21BO75037 1637 aa31.7■■■□□ 2.66
SRSF4-202ENST00000466448 NUP153P49790 1475 aaKnown RBP31.7■■■□□ 2.66
SRSF4-202ENST00000466448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.69■■■□□ 2.66
SRSF4-202ENST00000466448 HNRNPUL2Q1KMD3 747 aaKnown RBP31.69■■■□□ 2.66
SRSF4-202ENST00000466448 PHLDB1Q86UU1 1377 aa31.68■■■□□ 2.66
SRSF4-202ENST00000466448 FHOD3Q2V2M9 1422 aa31.67■■■□□ 2.66
SRSF4-202ENST00000466448 NEO1Q92859 1461 aa31.63■■■□□ 2.65
SRSF4-202ENST00000466448 RAPGEF3O95398 923 aa31.61■■■□□ 2.65
SRSF4-202ENST00000466448 ILDR1Q86SU0 546 aaPredicted RBP31.61■■■□□ 2.65
SRSF4-202ENST00000466448 FRMPD1Q5SYB0 1578 aa31.52■■■□□ 2.64
SRSF4-202ENST00000466448 EFCAB5A4FU69 1503 aa31.52■■■□□ 2.64
SRSF4-202ENST00000466448 PLEKHD1A6NEE1 506 aa31.51■■■□□ 2.63
SRSF4-202ENST00000466448 ADAMTSL3P82987 1691 aa31.45■■■□□ 2.63
SRSF4-202ENST00000466448 PTPRMP28827 1452 aa31.44■■■□□ 2.62
SRSF4-202ENST00000466448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.43■■■□□ 2.629e-8■■□□□ 12.5
SRSF4-202ENST00000466448 FANCAO15360 1455 aa31.4■■■□□ 2.62
SRSF4-202ENST00000466448 DENND4BO75064 1496 aaPredicted RBP31.4■■■□□ 2.62
SRSF4-202ENST00000466448 AKNAQ7Z591 1439 aa31.4■■■□□ 2.62
SRSF4-202ENST00000466448 ARID4BQ4LE39 1312 aaPredicted RBP31.38■■■□□ 2.61
SRSF4-202ENST00000466448 TTC37Q6PGP7 1564 aa31.38■■■□□ 2.61
SRSF4-202ENST00000466448 CDK13Q14004 1512 aaKnown RBP31.36■■■□□ 2.61
SRSF4-202ENST00000466448 ARHGEF40Q8TER5 1519 aa31.36■■■□□ 2.61
SRSF4-202ENST00000466448 BCORL1Q5H9F3 1711 aa31.35■■■□□ 2.61
SRSF4-202ENST00000466448 CFAP74Q9C0B2 1584 aa31.34■■■□□ 2.61
SRSF4-202ENST00000466448 RICTORQ6R327 1708 aa31.34■■■□□ 2.61
SRSF4-202ENST00000466448 EHMT2Q96KQ7 1210 aa31.33■■■□□ 2.61
SRSF4-202ENST00000466448 MADDQ8WXG6 1647 aa31.32■■■□□ 2.6
SRSF4-202ENST00000466448 UBTFP17480 764 aaKnown RBP31.29■■■□□ 2.6
SRSF4-202ENST00000466448 ZMYM4Q5VZL5 1548 aa31.27■■■□□ 2.6
SRSF4-202ENST00000466448 FMN1Q68DA7 1419 aa31.24■■■□□ 2.59
SRSF4-202ENST00000466448 ARHGAP35Q9NRY4 1499 aa31.24■■■□□ 2.59
SRSF4-202ENST00000466448 PLCH2O75038 1416 aa31.23■■■□□ 2.59
SRSF4-202ENST00000466448 YEATS2Q9ULM3 1422 aa31.23■■■□□ 2.59
SRSF4-202ENST00000466448 ATP1B4Q9UN42 357 aaPredicted RBP31.22■■■□□ 2.59
SRSF4-202ENST00000466448 ZFYVE16Q7Z3T8 1539 aa31.22■■■□□ 2.59
SRSF4-202ENST00000466448 HECW1Q76N89 1606 aa31.21■■■□□ 2.59
SRSF4-202ENST00000466448 CHIC1Q5VXU3 224 aa31.19■■■□□ 2.58
SRSF4-202ENST00000466448 MAGI2Q86UL8 1455 aa31.19■■■□□ 2.58
SRSF4-202ENST00000466448 PCF11O94913 1555 aaKnown RBP31.18■■■□□ 2.58
SRSF4-202ENST00000466448 SCAPERQ9BY12 1400 aa31.18■■■□□ 2.58
SRSF4-202ENST00000466448 POGZQ7Z3K3 1410 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms