RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 CTTNBP2Q8WZ74 1663 aa23.96■■□□□ 1.43
HLA-F-223ENST00000465459 IQGAP2Q13576 1575 aa23.96■■□□□ 1.43
HLA-F-223ENST00000465459 UBTFP17480 764 aaKnown RBP23.96■■□□□ 1.43
HLA-F-223ENST00000465459 JPH4Q96JJ6 628 aa23.95■■□□□ 1.42
HLA-F-223ENST00000465459 SHROOM2Q13796 1616 aa23.93■■□□□ 1.42
HLA-F-223ENST00000465459 DNAJC5Q9H3Z4 198 aa23.91■■□□□ 1.42
HLA-F-223ENST00000465459 EHMT2Q96KQ7 1210 aa23.89■■□□□ 1.41
HLA-F-223ENST00000465459 TNIKQ9UKE5 1360 aa23.89■■□□□ 1.41
HLA-F-223ENST00000465459 UGGT2Q9NYU1 1516 aa23.88■■□□□ 1.41
HLA-F-223ENST00000465459 PRG4Q92954 1404 aaPredicted RBP23.84■■□□□ 1.41
HLA-F-223ENST00000465459 LOC105371045A0A1W2PR82 267 aa23.82■■□□□ 1.4
HLA-F-223ENST00000465459 CARMIL2Q6F5E8 1435 aa23.82■■□□□ 1.4
HLA-F-223ENST00000465459 ARHGEF11O15085 1522 aa23.79■■□□□ 1.4
HLA-F-223ENST00000465459 DISP1Q96F81 1524 aa23.76■■□□□ 1.39
HLA-F-223ENST00000465459 EFCAB5A4FU69 1503 aa23.74■■□□□ 1.39
HLA-F-223ENST00000465459 RIMBP3CA6NJZ7 1639 aa23.73■■□□□ 1.39
HLA-F-223ENST00000465459 RIMBP3BA6NNM3 1639 aa23.73■■□□□ 1.39
HLA-F-223ENST00000465459 RIMBP3Q9UFD9 1639 aa23.73■■□□□ 1.39
HLA-F-223ENST00000465459 SAMD9Q5K651 1589 aa23.72■■□□□ 1.39
HLA-F-223ENST00000465459 ERCC6L2Q5T890 1561 aa23.72■■□□□ 1.39
HLA-F-223ENST00000465459 KIAA0556O60303 1618 aa23.72■■□□□ 1.39
HLA-F-223ENST00000465459 RANGAP1P46060 587 aaPredicted RBP23.67■■□□□ 1.38
HLA-F-223ENST00000465459 CLIP1P30622 1438 aa23.65■■□□□ 1.38
HLA-F-223ENST00000465459 PTPRGP23470 1445 aa23.64■■□□□ 1.37
HLA-F-223ENST00000465459 CEP162Q5TB80 1403 aa23.64■■□□□ 1.37
HLA-F-223ENST00000465459 ARAP1Q96P48 1450 aa23.63■■□□□ 1.37
HLA-F-223ENST00000465459 ARHGAP35Q9NRY4 1499 aa23.63■■□□□ 1.37
HLA-F-223ENST00000465459 P3H3Q8IVL6 736 aa23.6■■□□□ 1.37
HLA-F-223ENST00000465459 FHOD3Q2V2M9 1422 aa23.57■■□□□ 1.36
HLA-F-223ENST00000465459 CYB5RLQ6IPT4 315 aa23.55■■□□□ 1.36
HLA-F-223ENST00000465459 FMN1Q68DA7 1419 aa23.52■■□□□ 1.36
HLA-F-223ENST00000465459 UACAQ9BZF9 1416 aa23.5■■□□□ 1.35
HLA-F-223ENST00000465459 TTBK1Q5TCY1 1321 aaPredicted RBP23.49■■□□□ 1.35
HLA-F-223ENST00000465459 UHRF1BP1LA0JNW5 1464 aa23.47■■□□□ 1.35
HLA-F-223ENST00000465459 ABCA8O94911 1581 aa23.44■■□□□ 1.34
HLA-F-223ENST00000465459 PLB1Q6P1J6 1458 aa23.43■■□□□ 1.34
HLA-F-223ENST00000465459 ABCC2Q92887 1545 aa23.43■■□□□ 1.34
HLA-F-223ENST00000465459 RAPGEF6Q8TEU7 1601 aa23.39■■□□□ 1.33
HLA-F-223ENST00000465459 ADCY10Q96PN6 1610 aa23.39■■□□□ 1.33
HLA-F-223ENST00000465459 CASKIN1Q8WXD9 1431 aa23.36■■□□□ 1.33
HLA-F-223ENST00000465459 VPS8Q8N3P4 1428 aa23.35■■□□□ 1.33
HLA-F-223ENST00000465459 NPM1P06748 294 aaKnown RBP eCLIP23.35■■□□□ 1.33
HLA-F-223ENST00000465459 KDM5BQ9UGL1 1544 aa23.33■■□□□ 1.33
HLA-F-223ENST00000465459 FYCO1Q9BQS8 1478 aa23.33■■□□□ 1.33
HLA-F-223ENST00000465459 NUP153P49790 1475 aaKnown RBP23.32■■□□□ 1.32
HLA-F-223ENST00000465459 HECW1Q76N89 1606 aa23.31■■□□□ 1.32
HLA-F-223ENST00000465459 PCF11O94913 1555 aaKnown RBP23.29■■□□□ 1.32
HLA-F-223ENST00000465459 ATP10BO94823 1461 aa23.26■■□□□ 1.31
HLA-F-223ENST00000465459 ATP1B4Q9UN42 357 aaPredicted RBP23.25■■□□□ 1.31
HLA-F-223ENST00000465459 EPRSP07814 1512 aaKnown RBP23.24■■□□□ 1.31
HLA-F-223ENST00000465459 CCDC18Q5T9S5 1454 aa23.24■■□□□ 1.31
HLA-F-223ENST00000465459 ZCCHC11Q5TAX3 1644 aaKnown RBP23.22■■□□□ 1.31
HLA-F-223ENST00000465459 MAPKBP1O60336 1514 aa23.22■■□□□ 1.31
HLA-F-223ENST00000465459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.18■■□□□ 1.3
HLA-F-223ENST00000465459 HNRNPUL2Q1KMD3 747 aaKnown RBP23.18■■□□□ 1.3
HLA-F-223ENST00000465459 CDK11AQ9UQ88 783 aaPredicted RBP23.18■■□□□ 1.3
HLA-F-223ENST00000465459 ARID3CA6NKF2 412 aa23.17■■□□□ 1.3
HLA-F-223ENST00000465459 CDK13Q14004 1512 aaKnown RBP23.16■■□□□ 1.3
HLA-F-223ENST00000465459 ASXL2Q76L83 1435 aa23.16■■□□□ 1.3
HLA-F-223ENST00000465459 MAP3K1Q13233 1512 aa23.14■■□□□ 1.3
HLA-F-223ENST00000465459 PLEKHD1A6NEE1 506 aa23.14■■□□□ 1.29
HLA-F-223ENST00000465459 LRRIQ1Q96JM4 1722 aa23.13■■□□□ 1.29
HLA-F-223ENST00000465459 WDR7Q9Y4E6 1490 aa23.12■■□□□ 1.29
HLA-F-223ENST00000465459 APLP2Q06481 763 aa23.11■■□□□ 1.29
HLA-F-223ENST00000465459 TIAM1Q13009 1591 aa23.07■■□□□ 1.28
HLA-F-223ENST00000465459 TROQ12816 1431 aaPredicted RBP23.06■■□□□ 1.28
HLA-F-223ENST00000465459 CFAP43Q8NDM7 1665 aa23.06■■□□□ 1.28
HLA-F-223ENST00000465459 ABCC10Q5T3U5 1492 aa23.05■■□□□ 1.28
HLA-F-223ENST00000465459 MTUS2Q5JR59 1369 aa23.01■■□□□ 1.27
HLA-F-223ENST00000465459 GLI2P10070 1586 aa23■■□□□ 1.27
HLA-F-223ENST00000465459 KCNH8Q96L42 1107 aa22.99■■□□□ 1.27
HLA-F-223ENST00000465459 LRRC9Q6ZRR7 1453 aa22.98■■□□□ 1.27
HLA-F-223ENST00000465459 MAGI3Q5TCQ9 1506 aa22.98■■□□□ 1.27
HLA-F-223ENST00000465459 EHBP1L1Q8N3D4 1523 aa22.98■■□□□ 1.27
HLA-F-223ENST00000465459 DIP2BQ9P265 1576 aa22.98■■□□□ 1.27
HLA-F-223ENST00000465459 FAM69CQ0P6D2 419 aa22.96■■□□□ 1.27
HLA-F-223ENST00000465459 KIF14Q15058 1648 aa22.94■■□□□ 1.26
HLA-F-223ENST00000465459 KANK4Q5T7N3 995 aaPredicted RBP22.93■■□□□ 1.26
HLA-F-223ENST00000465459 TRHP20396 242 aaPredicted RBP22.92■■□□□ 1.26
HLA-F-223ENST00000465459 ABCA9Q8IUA7 1624 aa22.92■■□□□ 1.26
HLA-F-223ENST00000465459 KIF13AQ9H1H9 1805 aa22.9■■□□□ 1.26
HLA-F-223ENST00000465459 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.89■■□□□ 1.26
HLA-F-223ENST00000465459 SUPT6HQ7KZ85 1726 aaKnown RBP22.87■■□□□ 1.25
HLA-F-223ENST00000465459 CD109Q6YHK3 1445 aa22.86■■□□□ 1.25
HLA-F-223ENST00000465459 MAP3K4Q9Y6R4 1608 aa22.86■■□□□ 1.25
HLA-F-223ENST00000465459 NCOA2Q15596 1464 aa22.84■■□□□ 1.25
HLA-F-223ENST00000465459 TTC37Q6PGP7 1564 aa22.84■■□□□ 1.25
HLA-F-223ENST00000465459 CCNB3Q8WWL7 1395 aa22.81■■□□□ 1.24
HLA-F-223ENST00000465459 ARAP3Q8WWN8 1544 aa22.81■■□□□ 1.24
HLA-F-223ENST00000465459 PLCH2O75038 1416 aa22.81■■□□□ 1.24
HLA-F-223ENST00000465459 TEX14Q8IWB6 1497 aa22.78■■□□□ 1.24
HLA-F-223ENST00000465459 GPATCH8Q9UKJ3 1502 aaKnown RBP22.77■■□□□ 1.24
HLA-F-223ENST00000465459 MYO5CQ9NQX4 1742 aa22.77■■□□□ 1.24
HLA-F-223ENST00000465459 PHLDB1Q86UU1 1377 aa22.75■■□□□ 1.23
HLA-F-223ENST00000465459 EFCAB2Q5VUJ9 269 aa22.74■■□□□ 1.23
HLA-F-223ENST00000465459 PREX2Q70Z35 1606 aa22.74■■□□□ 1.23
HLA-F-223ENST00000465459 CDC42BPAQ5VT25 1732 aa22.73■■□□□ 1.23
HLA-F-223ENST00000465459 PPRC1Q5VV67 1664 aaKnown RBP22.72■■□□□ 1.23
HLA-F-223ENST00000465459 ITSN2Q9NZM3 1697 aa22.72■■□□□ 1.23
HLA-F-223ENST00000465459 CFDP1Q9UEE9 299 aaPredicted RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms