RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 RUSC2Q8N2Y8 1516 aa25.82■■□□□ 1.72
MRPL55-225ENST00000465268 CARMIL1Q5VZK9 1371 aa25.79■■□□□ 1.72
MRPL55-225ENST00000465268 KIAA0586Q9BVV6 1533 aa25.74■■□□□ 1.71
MRPL55-225ENST00000465268 CUL7Q14999 1698 aa25.73■■□□□ 1.71
MRPL55-225ENST00000465268 TTBK1Q5TCY1 1321 aaPredicted RBP25.54■■□□□ 1.68
MRPL55-225ENST00000465268 RAPGEF2Q9Y4G8 1499 aa25.53■■□□□ 1.68
MRPL55-225ENST00000465268 ADCY10Q96PN6 1610 aa25.52■■□□□ 1.68
MRPL55-225ENST00000465268 PTPRGP23470 1445 aa25.5■■□□□ 1.67
MRPL55-225ENST00000465268 IQGAP2Q13576 1575 aa25.48■■□□□ 1.67
MRPL55-225ENST00000465268 NPM1P06748 294 aaKnown RBP eCLIP25.47■■□□□ 1.67
MRPL55-225ENST00000465268 TNIKQ9UKE5 1360 aa25.46■■□□□ 1.67
MRPL55-225ENST00000465268 DISP1Q96F81 1524 aa25.44■■□□□ 1.66
MRPL55-225ENST00000465268 CARMIL2Q6F5E8 1435 aa25.44■■□□□ 1.66
MRPL55-225ENST00000465268 FAM69CQ0P6D2 419 aa25.43■■□□□ 1.66
MRPL55-225ENST00000465268 ABCC10Q5T3U5 1492 aa25.41■■□□□ 1.66
MRPL55-225ENST00000465268 MAPKBP1O60336 1514 aa25.41■■□□□ 1.66
MRPL55-225ENST00000465268 PRXQ9BXM0 1461 aa25.37■■□□□ 1.65
MRPL55-225ENST00000465268 KIF13AQ9H1H9 1805 aa25.37■■□□□ 1.65
MRPL55-225ENST00000465268 UGGT2Q9NYU1 1516 aa25.37■■□□□ 1.65
MRPL55-225ENST00000465268 DIP2BQ9P265 1576 aa25.31■■□□□ 1.64
MRPL55-225ENST00000465268 UACAQ9BZF9 1416 aa25.3■■□□□ 1.64
MRPL55-225ENST00000465268 ABCC2Q92887 1545 aa25.3■■□□□ 1.64
MRPL55-225ENST00000465268 UHRF1BP1LA0JNW5 1464 aa25.28■■□□□ 1.64
MRPL55-225ENST00000465268 KIAA0556O60303 1618 aa25.26■■□□□ 1.63
MRPL55-225ENST00000465268 CSRNP3Q8WYN3 585 aa25.24■■□□□ 1.63
MRPL55-225ENST00000465268 ASXL2Q76L83 1435 aa25.23■■□□□ 1.63
MRPL55-225ENST00000465268 KDM5BQ9UGL1 1544 aa25.17■■□□□ 1.62
MRPL55-225ENST00000465268 PLB1Q6P1J6 1458 aa25.16■■□□□ 1.62
MRPL55-225ENST00000465268 CTTNBP2Q8WZ74 1663 aa25.16■■□□□ 1.62
MRPL55-225ENST00000465268 FAM9AQ8IZU1 332 aaPredicted RBP25.13■■□□□ 1.61
MRPL55-225ENST00000465268 P3H3Q8IVL6 736 aa25.12■■□□□ 1.61
MRPL55-225ENST00000465268 GOLGA3Q08378 1498 aa25.12■■□□□ 1.61
MRPL55-225ENST00000465268 EPRSP07814 1512 aaKnown RBP25.07■■□□□ 1.6
MRPL55-225ENST00000465268 ZCCHC11Q5TAX3 1644 aaKnown RBP25.07■■□□□ 1.6
MRPL55-225ENST00000465268 GLI2P10070 1586 aa25.06■■□□□ 1.6
MRPL55-225ENST00000465268 ABCA8O94911 1581 aa25.05■■□□□ 1.6
MRPL55-225ENST00000465268 TSPOAP1O95153 1857 aa25.04■■□□□ 1.6
MRPL55-225ENST00000465268 EEA1Q15075 1411 aa25.04■■□□□ 1.6
MRPL55-225ENST00000465268 AEBP2Q6ZN18 517 aaPredicted RBP25.04■■□□□ 1.6
MRPL55-225ENST00000465268 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
MRPL55-225ENST00000465268 KDM6BO15054 1643 aa25■■□□□ 1.59
MRPL55-225ENST00000465268 ARID3CA6NKF2 412 aa24.99■■□□□ 1.59
MRPL55-225ENST00000465268 RANGAP1P46060 587 aaPredicted RBP24.99■■□□□ 1.59
MRPL55-225ENST00000465268 PPRC1Q5VV67 1664 aaKnown RBP24.99■■□□□ 1.59
MRPL55-225ENST00000465268 WDR7Q9Y4E6 1490 aa24.98■■□□□ 1.59
MRPL55-225ENST00000465268 COL17A1Q9UMD9 1497 aaPredicted RBP24.95■■□□□ 1.58
MRPL55-225ENST00000465268 KCNH8Q96L42 1107 aa24.94■■□□□ 1.58
MRPL55-225ENST00000465268 SAMD9Q5K651 1589 aa24.93■■□□□ 1.58
MRPL55-225ENST00000465268 MAP3K4Q9Y6R4 1608 aa24.91■■□□□ 1.58
MRPL55-225ENST00000465268 ATP10BO94823 1461 aa24.9■■□□□ 1.58
MRPL55-225ENST00000465268 EHMT2Q96KQ7 1210 aa24.9■■□□□ 1.58
MRPL55-225ENST00000465268 FHOD3Q2V2M9 1422 aa24.86■■□□□ 1.57
MRPL55-225ENST00000465268 KDM4FA0A1W2PPD8 638 aa24.85■■□□□ 1.57
MRPL55-225ENST00000465268 CD109Q6YHK3 1445 aa24.84■■□□□ 1.57
MRPL55-225ENST00000465268 KIF21BO75037 1637 aa24.83■■□□□ 1.57
MRPL55-225ENST00000465268 TEX14Q8IWB6 1497 aa24.81■■□□□ 1.56
MRPL55-225ENST00000465268 NUP153P49790 1475 aaKnown RBP24.77■■□□□ 1.56
MRPL55-225ENST00000465268 MAGI3Q5TCQ9 1506 aa24.77■■□□□ 1.56
MRPL55-225ENST00000465268 RAPGEF6Q8TEU7 1601 aa24.76■■□□□ 1.55
MRPL55-225ENST00000465268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.74■■□□□ 1.55
MRPL55-225ENST00000465268 UBTFP17480 764 aaKnown RBP24.74■■□□□ 1.55
MRPL55-225ENST00000465268 HNRNPUL2Q1KMD3 747 aaKnown RBP24.74■■□□□ 1.55
MRPL55-225ENST00000465268 CFAP43Q8NDM7 1665 aa24.7■■□□□ 1.54
MRPL55-225ENST00000465268 EFCAB5A4FU69 1503 aa24.67■■□□□ 1.54
MRPL55-225ENST00000465268 ARHGAP35Q9NRY4 1499 aa24.62■■□□□ 1.53
MRPL55-225ENST00000465268 ABCA9Q8IUA7 1624 aa24.61■■□□□ 1.53
MRPL55-225ENST00000465268 ADGRL1O94910 1474 aa24.59■■□□□ 1.53
MRPL55-225ENST00000465268 PLEKHD1A6NEE1 506 aa24.59■■□□□ 1.53
MRPL55-225ENST00000465268 CDK13Q14004 1512 aaKnown RBP24.56■■□□□ 1.52
MRPL55-225ENST00000465268 ARAP3Q8WWN8 1544 aa24.56■■□□□ 1.52
MRPL55-225ENST00000465268 RAPGEF3O95398 923 aa24.55■■□□□ 1.52
MRPL55-225ENST00000465268 ATP1B4Q9UN42 357 aaPredicted RBP24.53■■□□□ 1.52
MRPL55-225ENST00000465268 PHLDB1Q86UU1 1377 aa24.5■■□□□ 1.51
MRPL55-225ENST00000465268 FMN1Q68DA7 1419 aa24.49■■□□□ 1.51
MRPL55-225ENST00000465268 NEO1Q92859 1461 aa24.49■■□□□ 1.51
MRPL55-225ENST00000465268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.48■■□□□ 1.51
MRPL55-225ENST00000465268 TTC37Q6PGP7 1564 aa24.43■■□□□ 1.5
MRPL55-225ENST00000465268 AKNAQ7Z591 1439 aa24.41■■□□□ 1.5
MRPL55-225ENST00000465268 FRMPD1Q5SYB0 1578 aa24.41■■□□□ 1.5
MRPL55-225ENST00000465268 FANCAO15360 1455 aa24.39■■□□□ 1.5
MRPL55-225ENST00000465268 HECW1Q76N89 1606 aa24.39■■□□□ 1.49
MRPL55-225ENST00000465268 DENND4BO75064 1496 aaPredicted RBP24.35■■□□□ 1.49
MRPL55-225ENST00000465268 PLCH2O75038 1416 aa24.35■■□□□ 1.49
MRPL55-225ENST00000465268 TROQ12816 1431 aaPredicted RBP24.31■■□□□ 1.48
MRPL55-225ENST00000465268 CDK11AQ9UQ88 783 aaPredicted RBP24.31■■□□□ 1.48
MRPL55-225ENST00000465268 CASKIN1Q8WXD9 1431 aa24.3■■□□□ 1.48
MRPL55-225ENST00000465268 KIF14Q15058 1648 aa24.29■■□□□ 1.48
MRPL55-225ENST00000465268 PCF11O94913 1555 aaKnown RBP24.28■■□□□ 1.48
MRPL55-225ENST00000465268 CLIP1P30622 1438 aa24.27■■□□□ 1.48
MRPL55-225ENST00000465268 LRRIQ1Q96JM4 1722 aa24.27■■□□□ 1.48
MRPL55-225ENST00000465268 SCAPERQ9BY12 1400 aa24.27■■□□□ 1.48
MRPL55-225ENST00000465268 YEATS2Q9ULM3 1422 aa24.25■■□□□ 1.47
MRPL55-225ENST00000465268 RICTORQ6R327 1708 aa24.24■■□□□ 1.47
MRPL55-225ENST00000465268 EFCAB2Q5VUJ9 269 aa24.24■■□□□ 1.47
MRPL55-225ENST00000465268 ARID4BQ4LE39 1312 aaPredicted RBP24.23■■□□□ 1.47
MRPL55-225ENST00000465268 CFAP74Q9C0B2 1584 aa24.23■■□□□ 1.47
MRPL55-225ENST00000465268 ARHGEF40Q8TER5 1519 aa24.2■■□□□ 1.47
MRPL55-225ENST00000465268 POGZQ7Z3K3 1410 aa24.2■■□□□ 1.46
MRPL55-225ENST00000465268 ZMYM4Q5VZL5 1548 aa24.19■■□□□ 1.46
MRPL55-225ENST00000465268 CCDC18Q5T9S5 1454 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms