RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 RUSC2Q8N2Y8 1516 aa39.82■■■■□ 3.97
USP42-205ENST00000465073 KIAA0586Q9BVV6 1533 aa39.71■■■■□ 3.95
USP42-205ENST00000465073 CUL7Q14999 1698 aa39.69■■■■□ 3.94
USP42-205ENST00000465073 NPM1P06748 294 aaKnown RBP eCLIP39.6■■■■□ 3.93
USP42-205ENST00000465073 CARMIL1Q5VZK9 1371 aa39.58■■■■□ 3.93
USP42-205ENST00000465073 KIF13AQ9H1H9 1805 aa39.48■■■■□ 3.91
USP42-205ENST00000465073 AEBP2Q6ZN18 517 aaPredicted RBP39.45■■■■□ 3.91
USP42-205ENST00000465073 ADCY10Q96PN6 1610 aa39.44■■■■□ 3.9
USP42-205ENST00000465073 MAPKBP1O60336 1514 aa39.44■■■■□ 3.9
USP42-205ENST00000465073 FAM69CQ0P6D2 419 aa39.43■■■■□ 3.9
USP42-205ENST00000465073 ABCC10Q5T3U5 1492 aa39.43■■■■□ 3.9
USP42-205ENST00000465073 PTPRGP23470 1445 aa39.37■■■■□ 3.89
USP42-205ENST00000465073 CARMIL2Q6F5E8 1435 aa39.34■■■■□ 3.89
USP42-205ENST00000465073 TNIKQ9UKE5 1360 aa39.29■■■■□ 3.88
USP42-205ENST00000465073 IQGAP2Q13576 1575 aa39.26■■■■□ 3.88
USP42-205ENST00000465073 DIP2BQ9P265 1576 aa39.26■■■■□ 3.88
USP42-205ENST00000465073 TTBK1Q5TCY1 1321 aaPredicted RBP39.24■■■■□ 3.87
USP42-205ENST00000465073 RAPGEF2Q9Y4G8 1499 aa39.2■■■■□ 3.87
USP42-205ENST00000465073 ABCC2Q92887 1545 aa39.13■■■■□ 3.86
USP42-205ENST00000465073 DISP1Q96F81 1524 aa39.1■■■■□ 3.85
USP42-205ENST00000465073 UHRF1BP1LA0JNW5 1464 aa39.07■■■■□ 3.85
USP42-205ENST00000465073 UACAQ9BZF9 1416 aa39.05■■■■□ 3.84
USP42-205ENST00000465073 UGGT2Q9NYU1 1516 aa39.05■■■■□ 3.84
USP42-205ENST00000465073 PLB1Q6P1J6 1458 aa39■■■■□ 3.83
USP42-205ENST00000465073 ASXL2Q76L83 1435 aa39■■■■□ 3.83
USP42-205ENST00000465073 KDM6BO15054 1643 aa38.94■■■■□ 3.82
USP42-205ENST00000465073 TSPOAP1O95153 1857 aa38.94■■■■□ 3.82
USP42-205ENST00000465073 KIAA0556O60303 1618 aa38.89■■■■□ 3.82
USP42-205ENST00000465073 KDM5BQ9UGL1 1544 aa38.88■■■■□ 3.81
USP42-205ENST00000465073 GLI2P10070 1586 aa38.88■■■■□ 3.81
USP42-205ENST00000465073 PRXQ9BXM0 1461 aa38.79■■■■□ 3.8
USP42-205ENST00000465073 GOLGA3Q08378 1498 aa38.76■■■■□ 3.8
USP42-205ENST00000465073 CTTNBP2Q8WZ74 1663 aa38.76■■■■□ 3.8
USP42-205ENST00000465073 EPRSP07814 1512 aaKnown RBP38.75■■■■□ 3.79
USP42-205ENST00000465073 ZCCHC11Q5TAX3 1644 aaKnown RBP38.72■■■■□ 3.79
USP42-205ENST00000465073 PPRC1Q5VV67 1664 aaKnown RBP38.7■■■■□ 3.79
USP42-205ENST00000465073 KDM4FA0A1W2PPD8 638 aa38.64■■■■□ 3.78
USP42-205ENST00000465073 MAP3K4Q9Y6R4 1608 aa38.62■■■■□ 3.77
USP42-205ENST00000465073 WDR7Q9Y4E6 1490 aa38.6■■■■□ 3.77
USP42-205ENST00000465073 TEX14Q8IWB6 1497 aa38.59■■■■□ 3.77
USP42-205ENST00000465073 ABCA8O94911 1581 aa38.56■■■■□ 3.76
USP42-205ENST00000465073 CSRNP3Q8WYN3 585 aa38.53■■■■□ 3.76
USP42-205ENST00000465073 COL17A1Q9UMD9 1497 aaPredicted RBP38.52■■■■□ 3.76
USP42-205ENST00000465073 FAM9AQ8IZU1 332 aaPredicted RBP38.52■■■■□ 3.76
USP42-205ENST00000465073 KCNH8Q96L42 1107 aa38.44■■■■□ 3.74
USP42-205ENST00000465073 P3H3Q8IVL6 736 aa38.41■■■■□ 3.74
USP42-205ENST00000465073 CD109Q6YHK3 1445 aa38.41■■■■□ 3.74
USP42-205ENST00000465073 MAGI3Q5TCQ9 1506 aa38.36■■■■□ 3.73
USP42-205ENST00000465073 EEA1Q15075 1411 aa38.34■■■■□ 3.73
USP42-205ENST00000465073 CFAP43Q8NDM7 1665 aa38.32■■■■□ 3.73
USP42-205ENST00000465073 ATP10BO94823 1461 aa38.29■■■■□ 3.72
USP42-205ENST00000465073 ADGRL1O94910 1474 aa38.28■■■■□ 3.72
USP42-205ENST00000465073 ARID3CA6NKF2 412 aa38.28■■■■□ 3.72
USP42-205ENST00000465073 SAMD9Q5K651 1589 aa38.26■■■■□ 3.72
USP42-205ENST00000465073 RAPGEF6Q8TEU7 1601 aa38.12■■■■□ 3.69
USP42-205ENST00000465073 RANGAP1P46060 587 aaPredicted RBP38.1■■■■□ 3.69
USP42-205ENST00000465073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.08■■■■□ 3.69
USP42-205ENST00000465073 HNRNPUL2Q1KMD3 747 aaKnown RBP38.08■■■■□ 3.69
USP42-205ENST00000465073 ARAP3Q8WWN8 1544 aa38.07■■■■□ 3.69
USP42-205ENST00000465073 PHLDB1Q86UU1 1377 aa38.06■■■■□ 3.68
USP42-205ENST00000465073 ABCA9Q8IUA7 1624 aa38.05■■■■□ 3.68
USP42-205ENST00000465073 FHOD3Q2V2M9 1422 aa38.03■■■■□ 3.68
USP42-205ENST00000465073 NUP153P49790 1475 aaKnown RBP38.03■■■■□ 3.68
USP42-205ENST00000465073 KIF21BO75037 1637 aa37.96■■■■□ 3.67
USP42-205ENST00000465073 EFCAB5A4FU69 1503 aa37.91■■■■□ 3.66
USP42-205ENST00000465073 NEO1Q92859 1461 aa37.91■■■■□ 3.66
USP42-205ENST00000465073 PLEKHD1A6NEE1 506 aa37.9■■■■□ 3.66
USP42-205ENST00000465073 RAPGEF3O95398 923 aa37.85■■■■□ 3.65
USP42-205ENST00000465073 UBTFP17480 764 aaKnown RBP37.77■■■■□ 3.64
USP42-205ENST00000465073 CHIC1Q5VXU3 224 aa37.75■■■■□ 3.63
USP42-205ENST00000465073 HECW2Q9P2P5 1572 aa37.74■■■■□ 3.63
USP42-205ENST00000465073 EHMT2Q96KQ7 1210 aa37.7■■■■□ 3.63
USP42-205ENST00000465073 FRMPD1Q5SYB0 1578 aa37.67■■■■□ 3.62
USP42-205ENST00000465073 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.67■■■■□ 3.62
USP42-205ENST00000465073 AKNAQ7Z591 1439 aa37.66■■■■□ 3.62
USP42-205ENST00000465073 FANCAO15360 1455 aa37.64■■■■□ 3.62
USP42-205ENST00000465073 DENND4BO75064 1496 aaPredicted RBP37.64■■■■□ 3.62
USP42-205ENST00000465073 FMN1Q68DA7 1419 aa37.63■■■■□ 3.61
USP42-205ENST00000465073 CDK13Q14004 1512 aaKnown RBP37.62■■■■□ 3.61
USP42-205ENST00000465073 CFAP74Q9C0B2 1584 aa37.59■■■■□ 3.61
USP42-205ENST00000465073 ARID4BQ4LE39 1312 aaPredicted RBP37.57■■■■□ 3.61
USP42-205ENST00000465073 TTC37Q6PGP7 1564 aa37.57■■■■□ 3.6
USP42-205ENST00000465073 ARHGAP35Q9NRY4 1499 aa37.57■■■■□ 3.6
USP42-205ENST00000465073 ATP1B4Q9UN42 357 aaPredicted RBP37.57■■■■□ 3.6
USP42-205ENST00000465073 ADAMTSL3P82987 1691 aa37.56■■■■□ 3.6
USP42-205ENST00000465073 PTPRMP28827 1452 aa37.53■■■■□ 3.6
USP42-205ENST00000465073 RICTORQ6R327 1708 aa37.51■■■■□ 3.6
USP42-205ENST00000465073 CDK11AQ9UQ88 783 aaPredicted RBP37.51■■■■□ 3.59
USP42-205ENST00000465073 ARHGEF40Q8TER5 1519 aa37.49■■■■□ 3.59
USP42-205ENST00000465073 HECW1Q76N89 1606 aa37.49■■■■□ 3.59
USP42-205ENST00000465073 PLCH2O75038 1416 aa37.49■■■■□ 3.59
USP42-205ENST00000465073 ILDR1Q86SU0 546 aaPredicted RBP37.48■■■■□ 3.59
USP42-205ENST00000465073 BCORL1Q5H9F3 1711 aa37.47■■■■□ 3.59
USP42-205ENST00000465073 ZMYM4Q5VZL5 1548 aa37.44■■■■□ 3.58
USP42-205ENST00000465073 MAGI2Q86UL8 1455 aa37.4■■■■□ 3.58
USP42-205ENST00000465073 SCAPERQ9BY12 1400 aa37.39■■■■□ 3.58
USP42-205ENST00000465073 EFCAB2Q5VUJ9 269 aa37.39■■■■□ 3.58
USP42-205ENST00000465073 MADDQ8WXG6 1647 aa37.37■■■■□ 3.57
USP42-205ENST00000465073 ZFYVE16Q7Z3T8 1539 aa37.36■■■■□ 3.57
USP42-205ENST00000465073 POGZQ7Z3K3 1410 aa37.35■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms