RNA–Protein interactions for RNA: ENST00000464756.6

NFXL1-203, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 1 (best)

Gene NFXL1, Length 3,865 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-203ENST00000464756 KCNH8Q96L42 1107 aa17.85■□□□□ 0.45
NFXL1-203ENST00000464756 FAM9BQ8IZU0 186 aa17.85■□□□□ 0.45
NFXL1-203ENST00000464756 HNRNPUQ00839 825 aaKnown RBP eCLIP17.84■□□□□ 0.45
NFXL1-203ENST00000464756 FKBP8Q14318 412 aa17.83■□□□□ 0.45
NFXL1-203ENST00000464756 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.45
NFXL1-203ENST00000464756 FHOD3Q2V2M9 1422 aa17.82■□□□□ 0.44
NFXL1-203ENST00000464756 FOXD1Q16676 465 aa17.8■□□□□ 0.44
NFXL1-203ENST00000464756 SALL2Q9Y467 1007 aaPredicted RBP17.79■□□□□ 0.44
NFXL1-203ENST00000464756 TSPY4P0CV99 314 aa17.78■□□□□ 0.44
NFXL1-203ENST00000464756 TSPY10P0CW01 314 aa17.78■□□□□ 0.44
NFXL1-203ENST00000464756 CFDP1Q9UEE9 299 aaPredicted RBP17.77■□□□□ 0.44
NFXL1-203ENST00000464756 SYNJ1O43426 1573 aa17.77■□□□□ 0.44
NFXL1-203ENST00000464756 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.43
NFXL1-203ENST00000464756 IRX6P78412 446 aaPredicted RBP17.76■□□□□ 0.43
NFXL1-203ENST00000464756 RAB3GAP2Q9H2M9 1393 aa17.75■□□□□ 0.43
NFXL1-203ENST00000464756 FHAD1B1AJZ9 1412 aa17.75■□□□□ 0.43
NFXL1-203ENST00000464756 PLEKHD1A6NEE1 506 aa17.74■□□□□ 0.43
NFXL1-203ENST00000464756 DNAJC5BQ9UF47 199 aa17.74■□□□□ 0.43
NFXL1-203ENST00000464756 ERCC6Q03468 1493 aa17.74■□□□□ 0.43
NFXL1-203ENST00000464756 IGF1RP08069 1367 aa17.74■□□□□ 0.43
NFXL1-203ENST00000464756 RGL3Q3MIN7 710 aa17.73■□□□□ 0.43
NFXL1-203ENST00000464756 RAD54L2Q9Y4B4 1467 aa17.72■□□□□ 0.43
NFXL1-203ENST00000464756 FANCD2Q9BXW9 1451 aa17.71■□□□□ 0.43
NFXL1-203ENST00000464756 CHGAP10645 457 aaKnown RBP17.71■□□□□ 0.43
NFXL1-203ENST00000464756 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
NFXL1-203ENST00000464756 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
NFXL1-203ENST00000464756 EIF4G2P78344 907 aaKnown RBP eCLIP17.68■□□□□ 0.42
NFXL1-203ENST00000464756 FGD5Q6ZNL6 1462 aa17.67■□□□□ 0.42
NFXL1-203ENST00000464756 MRS2Q9HD23 443 aa17.67■□□□□ 0.42
NFXL1-203ENST00000464756 SETD5Q9C0A6 1442 aa17.66■□□□□ 0.42
NFXL1-203ENST00000464756 PDS5BQ9NTI5 1447 aa17.66■□□□□ 0.42
NFXL1-203ENST00000464756 CLSPNQ9HAW4 1339 aa17.63■□□□□ 0.41
NFXL1-203ENST00000464756 NESP48681 1621 aa17.62■□□□□ 0.41
NFXL1-203ENST00000464756 DHX57Q6P158 1386 aaKnown RBP17.62■□□□□ 0.41
NFXL1-203ENST00000464756 ARHGAP35Q9NRY4 1499 aa17.61■□□□□ 0.41
NFXL1-203ENST00000464756 KIF21BO75037 1637 aa17.61■□□□□ 0.41
NFXL1-203ENST00000464756 ARAP1Q96P48 1450 aa17.59■□□□□ 0.41
NFXL1-203ENST00000464756 TMC1Q8TDI8 760 aa17.55■□□□□ 0.4
NFXL1-203ENST00000464756 CFTRP13569 1480 aa17.54■□□□□ 0.4
NFXL1-203ENST00000464756 FMN1Q68DA7 1419 aa17.53■□□□□ 0.4
NFXL1-203ENST00000464756 PLPPR3Q6T4P5 718 aa17.53■□□□□ 0.4
NFXL1-203ENST00000464756 NPM1P06748 294 aaKnown RBP eCLIP17.52■□□□□ 0.4
NFXL1-203ENST00000464756 CUX1P39880 1505 aa17.52■□□□□ 0.4
NFXL1-203ENST00000464756 PHLDB1Q86UU1 1377 aa17.5■□□□□ 0.39
NFXL1-203ENST00000464756 PPP1R15AO75807 674 aaPredicted RBP17.49■□□□□ 0.39
NFXL1-203ENST00000464756 MPHOSPH9Q99550 1183 aa17.48■□□□□ 0.39
NFXL1-203ENST00000464756 CARD11Q9BXL7 1154 aa17.47■□□□□ 0.39
NFXL1-203ENST00000464756 HSPA5P11021 654 aaKnown RBP17.47■□□□□ 0.39
NFXL1-203ENST00000464756 SUPT16HQ9Y5B9 1047 aaKnown RBP17.47■□□□□ 0.39
NFXL1-203ENST00000464756 UNC13AQ9UPW8 1703 aa17.47■□□□□ 0.39
NFXL1-203ENST00000464756 BCL11AQ9H165 835 aa17.47■□□□□ 0.39
NFXL1-203ENST00000464756 AQRO60306 1485 aaKnown RBP eCLIP17.46■□□□□ 0.392e-6■■■■■ 26.9
NFXL1-203ENST00000464756 PRXQ9BXM0 1461 aa17.46■□□□□ 0.39
NFXL1-203ENST00000464756 PKD2Q13563 968 aa17.46■□□□□ 0.38
NFXL1-203ENST00000464756 JPH4Q96JJ6 628 aa17.45■□□□□ 0.38
NFXL1-203ENST00000464756 DCAF11Q8TEB1 546 aa17.44■□□□□ 0.38
NFXL1-203ENST00000464756 ZNF644Q9H582 1327 aaPredicted RBP17.44■□□□□ 0.38
NFXL1-203ENST00000464756 L3MBTL2Q969R5 705 aa17.44■□□□□ 0.38
NFXL1-203ENST00000464756 GAPVD1Q14C86 1478 aa17.42■□□□□ 0.38
NFXL1-203ENST00000464756 DAXXQ9UER7 740 aaPredicted RBP17.41■□□□□ 0.38
NFXL1-203ENST00000464756 TOP2BQ02880 1626 aa17.41■□□□□ 0.38
NFXL1-203ENST00000464756 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.38
NFXL1-203ENST00000464756 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.37
NFXL1-203ENST00000464756 NPM2Q86SE8 214 aaKnown RBP17.36■□□□□ 0.37
NFXL1-203ENST00000464756 STAG3Q9UJ98 1225 aa17.35■□□□□ 0.37
NFXL1-203ENST00000464756 TIMELESSQ9UNS1 1208 aa17.34■□□□□ 0.37
NFXL1-203ENST00000464756 LRRC9Q6ZRR7 1453 aa17.33■□□□□ 0.36
NFXL1-203ENST00000464756 POLA1P09884 1462 aaPredicted RBP17.32■□□□□ 0.36
NFXL1-203ENST00000464756 NUP155O75694 1391 aa17.32■□□□□ 0.36
NFXL1-203ENST00000464756 HMGXB3Q12766 1538 aa17.32■□□□□ 0.36
NFXL1-203ENST00000464756 CANXP27824 592 aaKnown RBP17.32■□□□□ 0.36
NFXL1-203ENST00000464756 CCDC136Q96JN2 1154 aa17.31■□□□□ 0.36
NFXL1-203ENST00000464756 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
NFXL1-203ENST00000464756 CARMIL2Q6F5E8 1435 aa17.29■□□□□ 0.36
NFXL1-203ENST00000464756 ERICH3Q5RHP9 1530 aa17.29■□□□□ 0.36
NFXL1-203ENST00000464756 TOPBP1Q92547 1522 aa17.28■□□□□ 0.36
NFXL1-203ENST00000464756 FGD6Q6ZV73 1430 aa17.26■□□□□ 0.35
NFXL1-203ENST00000464756 CCDC18Q5T9S5 1454 aa17.25■□□□□ 0.35
NFXL1-203ENST00000464756 WDR43Q15061 677 aaKnown RBP eCLIP17.23■□□□□ 0.35
NFXL1-203ENST00000464756 ESF1Q9H501 851 aaKnown RBP17.23■□□□□ 0.35
NFXL1-203ENST00000464756 TNNT2P45379 298 aaPredicted RBP17.22■□□□□ 0.35
NFXL1-203ENST00000464756 PEG3Q9GZU2 1588 aa17.22■□□□□ 0.35
NFXL1-203ENST00000464756 MYT1Q01538 1121 aa17.22■□□□□ 0.35
NFXL1-203ENST00000464756 B4GALNT3Q6L9W6 998 aa17.22■□□□□ 0.35
NFXL1-203ENST00000464756 SLC24A1O60721 1099 aa17.21■□□□□ 0.35
NFXL1-203ENST00000464756 RRBP1Q9P2E9 1410 aaKnown RBP17.21■□□□□ 0.35
NFXL1-203ENST00000464756 GGT6Q6P531 493 aa17.19■□□□□ 0.34
NFXL1-203ENST00000464756 CASKIN1Q8WXD9 1431 aa17.18■□□□□ 0.34
NFXL1-203ENST00000464756 ANKRD30AQ9BXX3 1397 aa17.18■□□□□ 0.34
NFXL1-203ENST00000464756 CCER2I3L3R5 266 aa17.18■□□□□ 0.34
NFXL1-203ENST00000464756 RTL5Q5HYW3 569 aaPredicted RBP17.18■□□□□ 0.34
NFXL1-203ENST00000464756 NEUROD2Q15784 382 aa17.17■□□□□ 0.34
NFXL1-203ENST00000464756 NCOA2Q15596 1464 aa17.17■□□□□ 0.34
NFXL1-203ENST00000464756 MYOM3Q5VTT5 1437 aa17.17■□□□□ 0.34
NFXL1-203ENST00000464756 SAFB2Q14151 953 aaKnown RBP eCLIP17.16■□□□□ 0.34
NFXL1-203ENST00000464756 KNSTRNQ9Y448 316 aa17.16■□□□□ 0.34
NFXL1-203ENST00000464756 ST20-MTHFSA0A0A6YYL1 179 aa17.13■□□□□ 0.33
NFXL1-203ENST00000464756 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
NFXL1-203ENST00000464756 PTPRGP23470 1445 aa17.12■□□□□ 0.33
NFXL1-203ENST00000464756 EFCAB2Q5VUJ9 269 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms