RNA–Protein interactions for RNA: ENST00000464756.6

NFXL1-203, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 1 (best)

Gene NFXL1, Length 3,865 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-203ENST00000464756 NISCHQ9Y2I1 1504 aa24.12■■□□□ 1.45
NFXL1-203ENST00000464756 DCAF8L2P0C7V8 631 aa23.17■■□□□ 1.3
NFXL1-203ENST00000464756 SHROOM4Q9ULL8 1493 aa22.49■■□□□ 1.19
NFXL1-203ENST00000464756 SUPT5HO00267 1087 aaKnown RBP22.39■■□□□ 1.17
NFXL1-203ENST00000464756 EHMT2Q96KQ7 1210 aa21.41■■□□□ 1.02
NFXL1-203ENST00000464756 FAM9AQ8IZU1 332 aaPredicted RBP21.01■□□□□ 0.95
NFXL1-203ENST00000464756 PCGF6Q9BYE7 350 aa20.74■□□□□ 0.91
NFXL1-203ENST00000464756 TTBK1Q5TCY1 1321 aaPredicted RBP20.59■□□□□ 0.89
NFXL1-203ENST00000464756 TRIM41Q8WV44 630 aa20.56■□□□□ 0.88
NFXL1-203ENST00000464756 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
NFXL1-203ENST00000464756 LOC105371045A0A1W2PR82 267 aa20.48■□□□□ 0.87
NFXL1-203ENST00000464756 ABCC9O60706 1549 aa20.36■□□□□ 0.85
NFXL1-203ENST00000464756 RANGAP1P46060 587 aaPredicted RBP20.34■□□□□ 0.85
NFXL1-203ENST00000464756 PPARGC1BQ86YN6 1023 aaKnown RBP20.33■□□□□ 0.85
NFXL1-203ENST00000464756 ZCCHC6Q5VYS8 1495 aaKnown RBP20.1■□□□□ 0.81
NFXL1-203ENST00000464756 PABPN1Q86U42 306 aaKnown RBP eCLIP20.08■□□□□ 0.8
NFXL1-203ENST00000464756 UBTFP17480 764 aaKnown RBP20.04■□□□□ 0.8
NFXL1-203ENST00000464756 APLP2Q06481 763 aa19.97■□□□□ 0.79
NFXL1-203ENST00000464756 CCER1Q8TC90 406 aaPredicted RBP19.83■□□□□ 0.77
NFXL1-203ENST00000464756 HRCP23327 699 aa19.81■□□□□ 0.76
NFXL1-203ENST00000464756 TRIM26Q12899 539 aaPredicted RBP19.8■□□□□ 0.76
NFXL1-203ENST00000464756 SCRIBQ14160 1630 aa19.75■□□□□ 0.75
NFXL1-203ENST00000464756 CCDC180Q9P1Z9 1646 aa19.75■□□□□ 0.75
NFXL1-203ENST00000464756 ATP1B4Q9UN42 357 aaPredicted RBP19.72■□□□□ 0.75
NFXL1-203ENST00000464756 MYO15BQ96JP2 1530 aa19.56■□□□□ 0.72
NFXL1-203ENST00000464756 ZEB1P37275 1124 aaPredicted RBP19.52■□□□□ 0.72
NFXL1-203ENST00000464756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.51■□□□□ 0.71
NFXL1-203ENST00000464756 HNRNPUL2Q1KMD3 747 aaKnown RBP19.48■□□□□ 0.71
NFXL1-203ENST00000464756 ITGAEP38570 1179 aa19.43■□□□□ 0.7
NFXL1-203ENST00000464756 RSF1Q96T23 1441 aaPredicted RBP19.35■□□□□ 0.69
NFXL1-203ENST00000464756 YTHDC1Q96MU7 727 aaKnown RBP19.3■□□□□ 0.68
NFXL1-203ENST00000464756 CECR2Q9BXF3 1484 aa19.2■□□□□ 0.66
NFXL1-203ENST00000464756 CSRNP3Q8WYN3 585 aa19.19■□□□□ 0.66
NFXL1-203ENST00000464756 DCAF1Q9Y4B6 1507 aa19.04■□□□□ 0.64
NFXL1-203ENST00000464756 CENPBP07199 599 aaPredicted RBP19.04■□□□□ 0.64
NFXL1-203ENST00000464756 P3H3Q8IVL6 736 aa19■□□□□ 0.63
NFXL1-203ENST00000464756 RB1CC1Q8TDY2 1594 aa18.95■□□□□ 0.62
NFXL1-203ENST00000464756 NACADO15069 1562 aa18.95■□□□□ 0.62
NFXL1-203ENST00000464756 DIEXFQ68CQ4 756 aaKnown RBP18.91■□□□□ 0.62
NFXL1-203ENST00000464756 FAM50AQ14320 339 aaKnown RBP18.9■□□□□ 0.62
NFXL1-203ENST00000464756 MROH2BQ7Z745 1585 aa18.9■□□□□ 0.62
NFXL1-203ENST00000464756 ARID3CA6NKF2 412 aa18.83■□□□□ 0.61
NFXL1-203ENST00000464756 CNGB1Q14028 1251 aaPredicted RBP18.77■□□□□ 0.6
NFXL1-203ENST00000464756 NEUROD1Q13562 356 aa18.76■□□□□ 0.59
NFXL1-203ENST00000464756 FBLN2P98095 1184 aa18.68■□□□□ 0.58
NFXL1-203ENST00000464756 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
NFXL1-203ENST00000464756 SOGA1O94964 1423 aa18.68■□□□□ 0.58
NFXL1-203ENST00000464756 POLR3GLQ9BT43 218 aa18.65■□□□□ 0.58
NFXL1-203ENST00000464756 WIZO95785 1651 aa18.65■□□□□ 0.58
NFXL1-203ENST00000464756 WRNQ14191 1432 aaPredicted RBP eCLIP18.64■□□□□ 0.58
NFXL1-203ENST00000464756 ABCC8Q09428 1581 aa18.64■□□□□ 0.57
NFXL1-203ENST00000464756 CEP162Q5TB80 1403 aa18.64■□□□□ 0.57
NFXL1-203ENST00000464756 PELP1Q8IZL8 1130 aaKnown RBP18.63■□□□□ 0.57
NFXL1-203ENST00000464756 CCDC88BA6NC98 1476 aa18.6■□□□□ 0.57
NFXL1-203ENST00000464756 BAZ1BQ9UIG0 1483 aaKnown RBP18.6■□□□□ 0.57
NFXL1-203ENST00000464756 CLIP1P30622 1438 aa18.57■□□□□ 0.56
NFXL1-203ENST00000464756 ZNF316A6NFI3 1004 aaPredicted RBP18.56■□□□□ 0.56
NFXL1-203ENST00000464756 TRIM52Q96A61 297 aa18.55■□□□□ 0.56
NFXL1-203ENST00000464756 GTF3C3Q9Y5Q9 886 aa18.49■□□□□ 0.55
NFXL1-203ENST00000464756 MYT1LQ9UL68 1186 aa18.46■□□□□ 0.55
NFXL1-203ENST00000464756 GOLGA3Q08378 1498 aa18.44■□□□□ 0.54
NFXL1-203ENST00000464756 TNIKQ9UKE5 1360 aa18.43■□□□□ 0.54
NFXL1-203ENST00000464756 NEFLP07196 543 aa18.39■□□□□ 0.53
NFXL1-203ENST00000464756 RUSC2Q8N2Y8 1516 aa18.37■□□□□ 0.53
NFXL1-203ENST00000464756 ZNF326Q5BKZ1 582 aaKnown RBP18.37■□□□□ 0.53
NFXL1-203ENST00000464756 EEA1Q15075 1411 aa18.36■□□□□ 0.53
NFXL1-203ENST00000464756 CHIC2Q9UKJ5 165 aa18.35■□□□□ 0.53
NFXL1-203ENST00000464756 ZNF777Q9ULD5 760 aaPredicted RBP18.34■□□□□ 0.53
NFXL1-203ENST00000464756 HIRIP3Q9BW71 556 aaPredicted RBP18.33■□□□□ 0.53
NFXL1-203ENST00000464756 ACIN1Q9UKV3 1341 aaKnown RBP18.31■□□□□ 0.52
NFXL1-203ENST00000464756 CEP164Q9UPV0 1460 aa18.29■□□□□ 0.52
NFXL1-203ENST00000464756 BCANQ96GW7 911 aa18.28■□□□□ 0.52
NFXL1-203ENST00000464756 TOP2AP11388 1531 aaKnown RBP18.27■□□□□ 0.52
NFXL1-203ENST00000464756 MIER1Q8N108 512 aa18.25■□□□□ 0.51
NFXL1-203ENST00000464756 KIF27Q86VH2 1401 aa18.25■□□□□ 0.51
NFXL1-203ENST00000464756 KANK4Q5T7N3 995 aaPredicted RBP18.24■□□□□ 0.51
NFXL1-203ENST00000464756 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
NFXL1-203ENST00000464756 DDX10Q13206 875 aaKnown RBP18.21■□□□□ 0.51
NFXL1-203ENST00000464756 ATAD2BQ9ULI0 1458 aa18.2■□□□□ 0.5
NFXL1-203ENST00000464756 SCAF1Q9H7N4 1312 aaKnown RBP18.18■□□□□ 0.5
NFXL1-203ENST00000464756 CUX2O14529 1486 aa18.16■□□□□ 0.5
NFXL1-203ENST00000464756 MTUS2Q5JR59 1369 aa18.15■□□□□ 0.5
NFXL1-203ENST00000464756 RRP7BPQ9NSQ0 103 aa18.14■□□□□ 0.49
NFXL1-203ENST00000464756 ANP32CO43423 234 aa18.12■□□□□ 0.49
NFXL1-203ENST00000464756 RAPGEF2Q9Y4G8 1499 aa18.1■□□□□ 0.49
NFXL1-203ENST00000464756 SIN3AQ96ST3 1273 aa18.09■□□□□ 0.49
NFXL1-203ENST00000464756 CARMIL1Q5VZK9 1371 aa18.09■□□□□ 0.49
NFXL1-203ENST00000464756 SMARCA2P51531 1590 aa18.08■□□□□ 0.48
NFXL1-203ENST00000464756 TONSLQ96HA7 1378 aa18.06■□□□□ 0.48
NFXL1-203ENST00000464756 CHMP7Q8WUX9 453 aaPredicted RBP18.06■□□□□ 0.48
NFXL1-203ENST00000464756 VPS8Q8N3P4 1428 aa18.05■□□□□ 0.48
NFXL1-203ENST00000464756 TDRD9Q8NDG6 1382 aaKnown RBP18.03■□□□□ 0.48
NFXL1-203ENST00000464756 ERICH6Q7L0X2 663 aa18.02■□□□□ 0.48
NFXL1-203ENST00000464756 CDK11AQ9UQ88 783 aaPredicted RBP18.02■□□□□ 0.48
NFXL1-203ENST00000464756 SLC4A1APQ9BWU0 796 aaKnown RBP17.99■□□□□ 0.47
NFXL1-203ENST00000464756 CCNB3Q8WWL7 1395 aa17.95■□□□□ 0.46
NFXL1-203ENST00000464756 CADPSQ9ULU8 1353 aa17.93■□□□□ 0.46
NFXL1-203ENST00000464756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.461e-6■■■■□ 21.3
NFXL1-203ENST00000464756 SENP3-EIF4A1A0A087X0R7 540 aa17.91■□□□□ 0.46
NFXL1-203ENST00000464756 KDM2AQ9Y2K7 1162 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms