RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 ABCC10Q5T3U5 1492 aa35.67■■■■□ 3.3
CD58-204ENST00000464088 RUSC2Q8N2Y8 1516 aa35.66■■■■□ 3.3
CD58-204ENST00000464088 MAPKBP1O60336 1514 aa35.64■■■■□ 3.3
CD58-204ENST00000464088 FAM69CQ0P6D2 419 aa35.6■■■■□ 3.29
CD58-204ENST00000464088 DIP2BQ9P265 1576 aa35.57■■■■□ 3.28
CD58-204ENST00000464088 NPM1P06748 294 aaKnown RBP eCLIP35.55■■■■□ 3.28
CD58-204ENST00000464088 ADCY10Q96PN6 1610 aa35.54■■■■□ 3.28
CD58-204ENST00000464088 KDM6BO15054 1643 aa35.41■■■■□ 3.26
CD58-204ENST00000464088 KIAA0586Q9BVV6 1533 aa35.41■■■■□ 3.26
CD58-204ENST00000464088 KDM4FA0A1W2PPD8 638 aa35.34■■■■□ 3.25
CD58-204ENST00000464088 TSPOAP1O95153 1857 aa35.31■■■■□ 3.24
CD58-204ENST00000464088 IGF1RP08069 1367 aa35.28■■■■□ 3.24
CD58-204ENST00000464088 CUL7Q14999 1698 aa35.27■■■■□ 3.24
CD58-204ENST00000464088 KIF27Q86VH2 1401 aa35.26■■■■□ 3.24
CD58-204ENST00000464088 CHIC1Q5VXU3 224 aa35.23■■■■□ 3.23
CD58-204ENST00000464088 PTPRGP23470 1445 aa35.16■■■■□ 3.22
CD58-204ENST00000464088 ABCC2Q92887 1545 aa35.11■■■■□ 3.21
CD58-204ENST00000464088 GLI2P10070 1586 aa35.08■■■■□ 3.21
CD58-204ENST00000464088 PPRC1Q5VV67 1664 aaKnown RBP35.07■■■■□ 3.2
CD58-204ENST00000464088 TNIKQ9UKE5 1360 aa35.06■■■■□ 3.2
CD58-204ENST00000464088 CARMIL2Q6F5E8 1435 aa35.04■■■■□ 3.2
CD58-204ENST00000464088 PLB1Q6P1J6 1458 aa35.03■■■■□ 3.2
CD58-204ENST00000464088 ASXL2Q76L83 1435 aa35.03■■■■□ 3.2
CD58-204ENST00000464088 CARMIL1Q5VZK9 1371 aa35■■■■□ 3.19
CD58-204ENST00000464088 UHRF1BP1LA0JNW5 1464 aa35■■■■□ 3.19
CD58-204ENST00000464088 IQGAP2Q13576 1575 aa34.96■■■■□ 3.19
CD58-204ENST00000464088 TTBK1Q5TCY1 1321 aaPredicted RBP34.93■■■■□ 3.18
CD58-204ENST00000464088 ILDR1Q86SU0 546 aaPredicted RBP34.9■■■■□ 3.18
CD58-204ENST00000464088 ADGRL1O94910 1474 aa34.9■■■■□ 3.18
CD58-204ENST00000464088 UACAQ9BZF9 1416 aa34.89■■■■□ 3.18
CD58-204ENST00000464088 DISP1Q96F81 1524 aa34.86■■■■□ 3.17
CD58-204ENST00000464088 MAP3K4Q9Y6R4 1608 aa34.85■■■■□ 3.17
CD58-204ENST00000464088 KDM5BQ9UGL1 1544 aa34.84■■■■□ 3.17
CD58-204ENST00000464088 COL17A1Q9UMD9 1497 aaPredicted RBP34.84■■■■□ 3.17
CD58-204ENST00000464088 EPRSP07814 1512 aaKnown RBP34.83■■■■□ 3.17
CD58-204ENST00000464088 EEA1Q15075 1411 aa34.82■■■■□ 3.17
CD58-204ENST00000464088 TEX14Q8IWB6 1497 aa34.77■■■■□ 3.16
CD58-204ENST00000464088 UGGT2Q9NYU1 1516 aa34.74■■■■□ 3.15
CD58-204ENST00000464088 ZCCHC11Q5TAX3 1644 aaKnown RBP34.73■■■■□ 3.15
CD58-204ENST00000464088 PRXQ9BXM0 1461 aa34.72■■■■□ 3.15
CD58-204ENST00000464088 RAPGEF2Q9Y4G8 1499 aa34.72■■■■□ 3.15
CD58-204ENST00000464088 CSRNP3Q8WYN3 585 aa34.71■■■■□ 3.15
CD58-204ENST00000464088 KIAA0556O60303 1618 aa34.66■■■■□ 3.14
CD58-204ENST00000464088 HECW2Q9P2P5 1572 aa34.64■■■■□ 3.14
CD58-204ENST00000464088 FAM9AQ8IZU1 332 aaPredicted RBP34.62■■■■□ 3.13
CD58-204ENST00000464088 WDR7Q9Y4E6 1490 aa34.58■■■■□ 3.13
CD58-204ENST00000464088 MAGI3Q5TCQ9 1506 aa34.49■■■■□ 3.11
CD58-204ENST00000464088 CFAP43Q8NDM7 1665 aa34.48■■■■□ 3.11
CD58-204ENST00000464088 KIF21BO75037 1637 aa34.48■■■■□ 3.11
CD58-204ENST00000464088 CD109Q6YHK3 1445 aa34.43■■■■□ 3.1
CD58-204ENST00000464088 CTTNBP2Q8WZ74 1663 aa34.42■■■■□ 3.1
CD58-204ENST00000464088 ABCA8O94911 1581 aa34.4■■■■□ 3.1
CD58-204ENST00000464088 GOLGA3Q08378 1498 aa34.37■■■■□ 3.09
CD58-204ENST00000464088 KCNH8Q96L42 1107 aa34.3■■■■□ 3.08
CD58-204ENST00000464088 ARAP3Q8WWN8 1544 aa34.25■■■■□ 3.07
CD58-204ENST00000464088 PHLDB1Q86UU1 1377 aa34.11■■■■□ 3.05
CD58-204ENST00000464088 EHMT2Q96KQ7 1210 aa34.11■■■■□ 3.05
CD58-204ENST00000464088 ADAMTSL3P82987 1691 aa34.1■■■■□ 3.05
CD58-204ENST00000464088 ABCA9Q8IUA7 1624 aa34.09■■■■□ 3.05
CD58-204ENST00000464088 ATP10BO94823 1461 aa34.08■■■■□ 3.05
CD58-204ENST00000464088 FBXO41Q8TF61 875 aa34.08■■■■□ 3.05
CD58-204ENST00000464088 UBTFP17480 764 aaKnown RBP34.06■■■■□ 3.04
CD58-204ENST00000464088 PTPRMP28827 1452 aa34.05■■■■□ 3.04
CD58-204ENST00000464088 SAMD9Q5K651 1589 aa34■■■■□ 3.03
CD58-204ENST00000464088 NEO1Q92859 1461 aa33.97■■■■□ 3.03
CD58-204ENST00000464088 ARID3CA6NKF2 412 aa33.95■■■■□ 3.03
CD58-204ENST00000464088 BCORL1Q5H9F3 1711 aa33.94■■■■□ 3.02
CD58-204ENST00000464088 RAPGEF3O95398 923 aa33.93■■■■□ 3.02
CD58-204ENST00000464088 FRMPD1Q5SYB0 1578 aa33.9■■■■□ 3.02
CD58-204ENST00000464088 P3H3Q8IVL6 736 aa33.89■■■■□ 3.02
CD58-204ENST00000464088 RAPGEF6Q8TEU7 1601 aa33.88■■■■□ 3.01
CD58-204ENST00000464088 EFCAB5A4FU69 1503 aa33.88■■■■□ 3.01
CD58-204ENST00000464088 MADDQ8WXG6 1647 aa33.86■■■■□ 3.01
CD58-204ENST00000464088 PCF11O94913 1555 aaKnown RBP33.85■■■■□ 3.01
CD58-204ENST00000464088 RANGAP1P46060 587 aaPredicted RBP33.85■■■■□ 3.01
CD58-204ENST00000464088 LMTK3Q96Q04 1460 aa33.81■■■■□ 3
CD58-204ENST00000464088 ARHGAP35Q9NRY4 1499 aa33.77■■■■□ 3
CD58-204ENST00000464088 LOC105371045A0A1W2PR82 267 aa33.76■■■□□ 2.99
CD58-204ENST00000464088 FHOD3Q2V2M9 1422 aa33.76■■■□□ 2.99
CD58-204ENST00000464088 ARID4BQ4LE39 1312 aaPredicted RBP33.76■■■□□ 2.99
CD58-204ENST00000464088 ARHGEF40Q8TER5 1519 aa33.75■■■□□ 2.99
CD58-204ENST00000464088 NUP153P49790 1475 aaKnown RBP33.75■■■□□ 2.99
CD58-204ENST00000464088 RICTORQ6R327 1708 aa33.73■■■□□ 2.99
CD58-204ENST00000464088 RIMS1Q86UR5 1692 aaKnown RBP33.71■■■□□ 2.99
CD58-204ENST00000464088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.71■■■□□ 2.99
CD58-204ENST00000464088 HNRNPUL2Q1KMD3 747 aaKnown RBP33.71■■■□□ 2.99
CD58-204ENST00000464088 DENND4BO75064 1496 aaPredicted RBP33.69■■■□□ 2.98
CD58-204ENST00000464088 CFAP74Q9C0B2 1584 aa33.64■■■□□ 2.98
CD58-204ENST00000464088 AKNAQ7Z591 1439 aa33.64■■■□□ 2.98
CD58-204ENST00000464088 CLIP1P30622 1438 aa33.63■■■□□ 2.97
CD58-204ENST00000464088 ZMYM4Q5VZL5 1548 aa33.61■■■□□ 2.97
CD58-204ENST00000464088 FANCAO15360 1455 aa33.6■■■□□ 2.97
CD58-204ENST00000464088 PLEKHD1A6NEE1 506 aa33.59■■■□□ 2.97
CD58-204ENST00000464088 CEP162Q5TB80 1403 aa33.58■■■□□ 2.97
CD58-204ENST00000464088 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.58■■■□□ 2.978e-7■■■■□ 22.1
CD58-204ENST00000464088 POGZQ7Z3K3 1410 aa33.57■■■□□ 2.96
CD58-204ENST00000464088 SIGLEC1Q9BZZ2 1709 aa33.55■■■□□ 2.96
CD58-204ENST00000464088 ZFYVE16Q7Z3T8 1539 aa33.53■■■□□ 2.96
CD58-204ENST00000464088 FMN1Q68DA7 1419 aa33.53■■■□□ 2.96
CD58-204ENST00000464088 MAGI2Q86UL8 1455 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms