RNA–Protein interactions for RNA: ENST00000463968.5

PARP1-204, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 830 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-204ENST00000463968 KIAA0586Q9BVV6 1533 aa17.31■□□□□ 0.36
PARP1-204ENST00000463968 NUP160Q12769 1436 aa17.3■□□□□ 0.36
PARP1-204ENST00000463968 CHD1O14646 1710 aa17.3■□□□□ 0.36
PARP1-204ENST00000463968 RANGAP1P46060 587 aaPredicted RBP17.27■□□□□ 0.36
PARP1-204ENST00000463968 JPH4Q96JJ6 628 aa17.26■□□□□ 0.35
PARP1-204ENST00000463968 IQGAP2Q13576 1575 aa17.24■□□□□ 0.35
PARP1-204ENST00000463968 CARMIL2Q6F5E8 1435 aa17.24■□□□□ 0.35
PARP1-204ENST00000463968 CEP170Q5SW79 1584 aa17.22■□□□□ 0.35
PARP1-204ENST00000463968 CTTNBP2Q8WZ74 1663 aa17.22■□□□□ 0.35
PARP1-204ENST00000463968 CLIP1P30622 1438 aa17.18■□□□□ 0.34
PARP1-204ENST00000463968 CEP162Q5TB80 1403 aa17.15■□□□□ 0.34
PARP1-204ENST00000463968 EFCAB5A4FU69 1503 aa17.15■□□□□ 0.34
PARP1-204ENST00000463968 PRG4Q92954 1404 aaPredicted RBP17.14■□□□□ 0.33
PARP1-204ENST00000463968 CLASP1Q7Z460 1538 aa17.13■□□□□ 0.33
PARP1-204ENST00000463968 UGGT2Q9NYU1 1516 aa17.13■□□□□ 0.33
PARP1-204ENST00000463968 P3H3Q8IVL6 736 aa17.11■□□□□ 0.33
PARP1-204ENST00000463968 TTBK1Q5TCY1 1321 aaPredicted RBP17.07■□□□□ 0.32
PARP1-204ENST00000463968 APLP2Q06481 763 aa17.07■□□□□ 0.32
PARP1-204ENST00000463968 FMN1Q68DA7 1419 aa17.06■□□□□ 0.32
PARP1-204ENST00000463968 SHROOM2Q13796 1616 aa17.05■□□□□ 0.32
PARP1-204ENST00000463968 PTPRGP23470 1445 aa17.04■□□□□ 0.32
PARP1-204ENST00000463968 ARHGAP35Q9NRY4 1499 aa17.02■□□□□ 0.32
PARP1-204ENST00000463968 ATP1B4Q9UN42 357 aaPredicted RBP17.02■□□□□ 0.32
PARP1-204ENST00000463968 KIAA0556O60303 1618 aa17.02■□□□□ 0.31
PARP1-204ENST00000463968 DISP1Q96F81 1524 aa17.01■□□□□ 0.31
PARP1-204ENST00000463968 SAMD9Q5K651 1589 aa17.01■□□□□ 0.31
PARP1-204ENST00000463968 FHOD3Q2V2M9 1422 aa17■□□□□ 0.31
PARP1-204ENST00000463968 NPM1P06748 294 aaKnown RBP eCLIP16.98■□□□□ 0.31
PARP1-204ENST00000463968 ARHGEF11O15085 1522 aa16.96■□□□□ 0.3
PARP1-204ENST00000463968 VPS8Q8N3P4 1428 aa16.95■□□□□ 0.3
PARP1-204ENST00000463968 DNAJC5Q9H3Z4 198 aa16.94■□□□□ 0.3
PARP1-204ENST00000463968 ARAP1Q96P48 1450 aa16.93■□□□□ 0.3
PARP1-204ENST00000463968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.93■□□□□ 0.3
PARP1-204ENST00000463968 HNRNPUL2Q1KMD3 747 aaKnown RBP16.93■□□□□ 0.3
PARP1-204ENST00000463968 CDK11AQ9UQ88 783 aaPredicted RBP16.93■□□□□ 0.3
PARP1-204ENST00000463968 CYB5RLQ6IPT4 315 aa16.92■□□□□ 0.3
PARP1-204ENST00000463968 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
PARP1-204ENST00000463968 CASKIN1Q8WXD9 1431 aa16.88■□□□□ 0.29
PARP1-204ENST00000463968 FYCO1Q9BQS8 1478 aa16.87■□□□□ 0.29
PARP1-204ENST00000463968 ERCC6L2Q5T890 1561 aa16.86■□□□□ 0.29
PARP1-204ENST00000463968 RIMBP3CA6NJZ7 1639 aa16.86■□□□□ 0.29
PARP1-204ENST00000463968 RIMBP3BA6NNM3 1639 aa16.86■□□□□ 0.29
PARP1-204ENST00000463968 RIMBP3Q9UFD9 1639 aa16.86■□□□□ 0.29
PARP1-204ENST00000463968 CCDC18Q5T9S5 1454 aa16.84■□□□□ 0.29
PARP1-204ENST00000463968 HECW1Q76N89 1606 aa16.84■□□□□ 0.29
PARP1-204ENST00000463968 UHRF1BP1LA0JNW5 1464 aa16.83■□□□□ 0.28
PARP1-204ENST00000463968 RAPGEF6Q8TEU7 1601 aa16.82■□□□□ 0.28
PARP1-204ENST00000463968 PLB1Q6P1J6 1458 aa16.82■□□□□ 0.28
PARP1-204ENST00000463968 PLEKHD1A6NEE1 506 aa16.82■□□□□ 0.28
PARP1-204ENST00000463968 ABCC2Q92887 1545 aa16.81■□□□□ 0.28
PARP1-204ENST00000463968 ABCA8O94911 1581 aa16.79■□□□□ 0.28
PARP1-204ENST00000463968 ARID3CA6NKF2 412 aa16.78■□□□□ 0.28
PARP1-204ENST00000463968 PCF11O94913 1555 aaKnown RBP16.77■□□□□ 0.27
PARP1-204ENST00000463968 MTUS2Q5JR59 1369 aa16.76■□□□□ 0.27
PARP1-204ENST00000463968 EPRSP07814 1512 aaKnown RBP16.75■□□□□ 0.27
PARP1-204ENST00000463968 MAP3K1Q13233 1512 aa16.74■□□□□ 0.27
PARP1-204ENST00000463968 NUP153P49790 1475 aaKnown RBP16.73■□□□□ 0.27
PARP1-204ENST00000463968 KDM5BQ9UGL1 1544 aa16.71■□□□□ 0.27
PARP1-204ENST00000463968 ATP10BO94823 1461 aa16.71■□□□□ 0.27
PARP1-204ENST00000463968 ADCY10Q96PN6 1610 aa16.68■□□□□ 0.26
PARP1-204ENST00000463968 TIAM1Q13009 1591 aa16.67■□□□□ 0.26
PARP1-204ENST00000463968 KCNH8Q96L42 1107 aa16.66■□□□□ 0.26
PARP1-204ENST00000463968 CDK13Q14004 1512 aaKnown RBP16.65■□□□□ 0.26
PARP1-204ENST00000463968 TROQ12816 1431 aaPredicted RBP16.64■□□□□ 0.25
PARP1-204ENST00000463968 ZCCHC11Q5TAX3 1644 aaKnown RBP16.63■□□□□ 0.25
PARP1-204ENST00000463968 LRRC9Q6ZRR7 1453 aa16.63■□□□□ 0.25
PARP1-204ENST00000463968 ASXL2Q76L83 1435 aa16.62■□□□□ 0.25
PARP1-204ENST00000463968 EHBP1L1Q8N3D4 1523 aa16.62■□□□□ 0.25
PARP1-204ENST00000463968 WDR7Q9Y4E6 1490 aa16.61■□□□□ 0.25
PARP1-204ENST00000463968 CFAP43Q8NDM7 1665 aa16.6■□□□□ 0.25
PARP1-204ENST00000463968 KANK4Q5T7N3 995 aaPredicted RBP16.59■□□□□ 0.25
PARP1-204ENST00000463968 MAPKBP1O60336 1514 aa16.59■□□□□ 0.25
PARP1-204ENST00000463968 CCNB3Q8WWL7 1395 aa16.57■□□□□ 0.24
PARP1-204ENST00000463968 PPARGC1BQ86YN6 1023 aaKnown RBP16.57■□□□□ 0.24
PARP1-204ENST00000463968 KIF14Q15058 1648 aa16.56■□□□□ 0.24
PARP1-204ENST00000463968 SUPT6HQ7KZ85 1726 aaKnown RBP16.55■□□□□ 0.24
PARP1-204ENST00000463968 TRHP20396 242 aaPredicted RBP16.54■□□□□ 0.24
PARP1-204ENST00000463968 FAM69CQ0P6D2 419 aa16.54■□□□□ 0.24
PARP1-204ENST00000463968 CFDP1Q9UEE9 299 aaPredicted RBP16.52■□□□□ 0.24
PARP1-204ENST00000463968 LRRIQ1Q96JM4 1722 aa16.5■□□□□ 0.23
PARP1-204ENST00000463968 NCOA2Q15596 1464 aa16.5■□□□□ 0.23
PARP1-204ENST00000463968 EFCAB2Q5VUJ9 269 aa16.5■□□□□ 0.23
PARP1-204ENST00000463968 ABCC10Q5T3U5 1492 aa16.48■□□□□ 0.23
PARP1-204ENST00000463968 CD109Q6YHK3 1445 aa16.47■□□□□ 0.23
PARP1-204ENST00000463968 MYOM3Q5VTT5 1437 aa16.45■□□□□ 0.22
PARP1-204ENST00000463968 MAGI3Q5TCQ9 1506 aa16.45■□□□□ 0.22
PARP1-204ENST00000463968 ZNF777Q9ULD5 760 aaPredicted RBP16.45■□□□□ 0.22
PARP1-204ENST00000463968 MIA2Q96PC5 1412 aa16.45■□□□□ 0.22
PARP1-204ENST00000463968 GLI2P10070 1586 aa16.43■□□□□ 0.22
PARP1-204ENST00000463968 FAM50AQ14320 339 aaKnown RBP16.43■□□□□ 0.22
PARP1-204ENST00000463968 RSPH4AQ5TD94 716 aa16.43■□□□□ 0.22
PARP1-204ENST00000463968 PLCH2O75038 1416 aa16.43■□□□□ 0.22
PARP1-204ENST00000463968 PHLDB1Q86UU1 1377 aa16.42■□□□□ 0.22
PARP1-204ENST00000463968 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.42■□□□□ 0.22
PARP1-204ENST00000463968 ITSN2Q9NZM3 1697 aa16.42■□□□□ 0.22
PARP1-204ENST00000463968 TEX14Q8IWB6 1497 aa16.42■□□□□ 0.22
PARP1-204ENST00000463968 ARHGAP5Q13017 1502 aa16.41■□□□□ 0.22
PARP1-204ENST00000463968 TRIM26Q12899 539 aaPredicted RBP16.41■□□□□ 0.22
PARP1-204ENST00000463968 ABCA9Q8IUA7 1624 aa16.41■□□□□ 0.22
PARP1-204ENST00000463968 GPATCH8Q9UKJ3 1502 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms