RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 IGF1RP08069 1367 aa34.75■■■■□ 3.15
VARS-221ENST00000463184 KIF27Q86VH2 1401 aa34.72■■■■□ 3.15
VARS-221ENST00000463184 NPM1P06748 294 aaKnown RBP eCLIP34.68■■■■□ 3.14
VARS-221ENST00000463184 KIAA0586Q9BVV6 1533 aa34.68■■■■□ 3.14
VARS-221ENST00000463184 KIF13AQ9H1H9 1805 aa34.65■■■■□ 3.14
VARS-221ENST00000463184 CUL7Q14999 1698 aa34.63■■■■□ 3.13
VARS-221ENST00000463184 FAM69CQ0P6D2 419 aa34.58■■■■□ 3.13
VARS-221ENST00000463184 ABCC10Q5T3U5 1492 aa34.57■■■■□ 3.12
VARS-221ENST00000463184 MAPKBP1O60336 1514 aa34.55■■■■□ 3.12
VARS-221ENST00000463184 ADCY10Q96PN6 1610 aa34.52■■■■□ 3.12
VARS-221ENST00000463184 CARMIL1Q5VZK9 1371 aa34.51■■■■□ 3.12
VARS-221ENST00000463184 DIP2BQ9P265 1576 aa34.41■■■■□ 3.1
VARS-221ENST00000463184 PTPRGP23470 1445 aa34.41■■■■□ 3.1
VARS-221ENST00000463184 CARMIL2Q6F5E8 1435 aa34.36■■■■□ 3.09
VARS-221ENST00000463184 TNIKQ9UKE5 1360 aa34.33■■■■□ 3.09
VARS-221ENST00000463184 TTBK1Q5TCY1 1321 aaPredicted RBP34.29■■■■□ 3.08
VARS-221ENST00000463184 IQGAP2Q13576 1575 aa34.27■■■■□ 3.08
VARS-221ENST00000463184 ABCC2Q92887 1545 aa34.22■■■■□ 3.07
VARS-221ENST00000463184 KDM6BO15054 1643 aa34.17■■■■□ 3.06
VARS-221ENST00000463184 RAPGEF2Q9Y4G8 1499 aa34.16■■■■□ 3.06
VARS-221ENST00000463184 TSPOAP1O95153 1857 aa34.16■■■■□ 3.06
VARS-221ENST00000463184 UHRF1BP1LA0JNW5 1464 aa34.15■■■■□ 3.06
VARS-221ENST00000463184 DISP1Q96F81 1524 aa34.14■■■■□ 3.06
VARS-221ENST00000463184 PLB1Q6P1J6 1458 aa34.13■■■■□ 3.05
VARS-221ENST00000463184 UACAQ9BZF9 1416 aa34.13■■■■□ 3.05
VARS-221ENST00000463184 ASXL2Q76L83 1435 aa34.12■■■■□ 3.05
VARS-221ENST00000463184 UGGT2Q9NYU1 1516 aa34.07■■■■□ 3.04
VARS-221ENST00000463184 GLI2P10070 1586 aa34.04■■■■□ 3.04
VARS-221ENST00000463184 KDM5BQ9UGL1 1544 aa33.99■■■■□ 3.03
VARS-221ENST00000463184 KDM4FA0A1W2PPD8 638 aa33.97■■■■□ 3.03
VARS-221ENST00000463184 KIAA0556O60303 1618 aa33.95■■■■□ 3.03
VARS-221ENST00000463184 PPRC1Q5VV67 1664 aaKnown RBP33.91■■■■□ 3.02
VARS-221ENST00000463184 EPRSP07814 1512 aaKnown RBP33.91■■■■□ 3.02
VARS-221ENST00000463184 ZCCHC11Q5TAX3 1644 aaKnown RBP33.86■■■■□ 3.01
VARS-221ENST00000463184 MAP3K4Q9Y6R4 1608 aa33.81■■■■□ 3
VARS-221ENST00000463184 GOLGA3Q08378 1498 aa33.81■■■■□ 3
VARS-221ENST00000463184 CTTNBP2Q8WZ74 1663 aa33.8■■■■□ 3
VARS-221ENST00000463184 TEX14Q8IWB6 1497 aa33.8■■■■□ 3
VARS-221ENST00000463184 PRXQ9BXM0 1461 aa33.76■■■□□ 2.99
VARS-221ENST00000463184 COL17A1Q9UMD9 1497 aaPredicted RBP33.76■■■□□ 2.99
VARS-221ENST00000463184 WDR7Q9Y4E6 1490 aa33.76■■■□□ 2.99
VARS-221ENST00000463184 ABCA8O94911 1581 aa33.67■■■□□ 2.98
VARS-221ENST00000463184 FAM9AQ8IZU1 332 aaPredicted RBP33.61■■■□□ 2.97
VARS-221ENST00000463184 KCNH8Q96L42 1107 aa33.61■■■□□ 2.97
VARS-221ENST00000463184 ADGRL1O94910 1474 aa33.61■■■□□ 2.97
VARS-221ENST00000463184 CD109Q6YHK3 1445 aa33.6■■■□□ 2.97
VARS-221ENST00000463184 MAGI3Q5TCQ9 1506 aa33.57■■■□□ 2.96
VARS-221ENST00000463184 CFAP43Q8NDM7 1665 aa33.54■■■□□ 2.96
VARS-221ENST00000463184 CSRNP3Q8WYN3 585 aa33.5■■■□□ 2.95
VARS-221ENST00000463184 P3H3Q8IVL6 736 aa33.49■■■□□ 2.95
VARS-221ENST00000463184 ATP10BO94823 1461 aa33.43■■■□□ 2.94
VARS-221ENST00000463184 ARID3CA6NKF2 412 aa33.41■■■□□ 2.94
VARS-221ENST00000463184 SAMD9Q5K651 1589 aa33.34■■■□□ 2.93
VARS-221ENST00000463184 ARAP3Q8WWN8 1544 aa33.32■■■□□ 2.92
VARS-221ENST00000463184 EEA1Q15075 1411 aa33.3■■■□□ 2.92
VARS-221ENST00000463184 PHLDB1Q86UU1 1377 aa33.29■■■□□ 2.92
VARS-221ENST00000463184 RAPGEF6Q8TEU7 1601 aa33.27■■■□□ 2.92
VARS-221ENST00000463184 ABCA9Q8IUA7 1624 aa33.25■■■□□ 2.91
VARS-221ENST00000463184 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.25■■■□□ 2.91
VARS-221ENST00000463184 HNRNPUL2Q1KMD3 747 aaKnown RBP33.25■■■□□ 2.91
VARS-221ENST00000463184 HECW2Q9P2P5 1572 aa33.19■■■□□ 2.9
VARS-221ENST00000463184 RANGAP1P46060 587 aaPredicted RBP33.18■■■□□ 2.9
VARS-221ENST00000463184 NUP153P49790 1475 aaKnown RBP33.16■■■□□ 2.9
VARS-221ENST00000463184 KIF21BO75037 1637 aa33.15■■■□□ 2.9
VARS-221ENST00000463184 NEO1Q92859 1461 aa33.15■■■□□ 2.9
VARS-221ENST00000463184 FHOD3Q2V2M9 1422 aa33.13■■■□□ 2.89
VARS-221ENST00000463184 RAPGEF3O95398 923 aa33.12■■■□□ 2.89
VARS-221ENST00000463184 ILDR1Q86SU0 546 aaPredicted RBP33.11■■■□□ 2.89
VARS-221ENST00000463184 PLEKHD1A6NEE1 506 aa33.09■■■□□ 2.89
VARS-221ENST00000463184 EFCAB5A4FU69 1503 aa33.01■■■□□ 2.87
VARS-221ENST00000463184 FRMPD1Q5SYB0 1578 aa32.95■■■□□ 2.86
VARS-221ENST00000463184 ADAMTSL3P82987 1691 aa32.94■■■□□ 2.86
VARS-221ENST00000463184 AKNAQ7Z591 1439 aa32.92■■■□□ 2.86
VARS-221ENST00000463184 DENND4BO75064 1496 aaPredicted RBP32.92■■■□□ 2.86
VARS-221ENST00000463184 PTPRMP28827 1452 aa32.92■■■□□ 2.86
VARS-221ENST00000463184 ARID4BQ4LE39 1312 aaPredicted RBP32.91■■■□□ 2.86
VARS-221ENST00000463184 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.89■■■□□ 2.86
VARS-221ENST00000463184 FANCAO15360 1455 aa32.89■■■□□ 2.86
VARS-221ENST00000463184 CFAP74Q9C0B2 1584 aa32.85■■■□□ 2.85
VARS-221ENST00000463184 BCORL1Q5H9F3 1711 aa32.85■■■□□ 2.85
VARS-221ENST00000463184 UBTFP17480 764 aaKnown RBP32.83■■■□□ 2.85
VARS-221ENST00000463184 RICTORQ6R327 1708 aa32.82■■■□□ 2.84
VARS-221ENST00000463184 ARHGEF40Q8TER5 1519 aa32.81■■■□□ 2.84
VARS-221ENST00000463184 TTC37Q6PGP7 1564 aa32.79■■■□□ 2.84
VARS-221ENST00000463184 CDK13Q14004 1512 aaKnown RBP32.78■■■□□ 2.84
VARS-221ENST00000463184 MADDQ8WXG6 1647 aa32.77■■■□□ 2.84
VARS-221ENST00000463184 FMN1Q68DA7 1419 aa32.77■■■□□ 2.84
VARS-221ENST00000463184 EHMT2Q96KQ7 1210 aa32.75■■■□□ 2.83
VARS-221ENST00000463184 PLCH2O75038 1416 aa32.74■■■□□ 2.83
VARS-221ENST00000463184 ZMYM4Q5VZL5 1548 aa32.73■■■□□ 2.83
VARS-221ENST00000463184 ATP1B4Q9UN42 357 aaPredicted RBP32.73■■■□□ 2.83
VARS-221ENST00000463184 MAGI2Q86UL8 1455 aa32.71■■■□□ 2.83
VARS-221ENST00000463184 POGZQ7Z3K3 1410 aa32.7■■■□□ 2.83
VARS-221ENST00000463184 CDK11AQ9UQ88 783 aaPredicted RBP32.7■■■□□ 2.83
VARS-221ENST00000463184 ARHGAP35Q9NRY4 1499 aa32.68■■■□□ 2.82
VARS-221ENST00000463184 ZFYVE16Q7Z3T8 1539 aa32.68■■■□□ 2.82
VARS-221ENST00000463184 CHIC1Q5VXU3 224 aa32.68■■■□□ 2.82
VARS-221ENST00000463184 HECW1Q76N89 1606 aa32.67■■■□□ 2.82
VARS-221ENST00000463184 SCAPERQ9BY12 1400 aa32.67■■■□□ 2.82
VARS-221ENST00000463184 YEATS2Q9ULM3 1422 aa32.66■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms