RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 RIMBP3CA6NJZ7 1639 aa33.44■■■□□ 2.94
NUP43-205ENST00000463048 RIMBP3BA6NNM3 1639 aa33.44■■■□□ 2.94
NUP43-205ENST00000463048 RIMBP3Q9UFD9 1639 aa33.44■■■□□ 2.94
NUP43-205ENST00000463048 KIAA0586Q9BVV6 1533 aa33.43■■■□□ 2.94
NUP43-205ENST00000463048 JPH4Q96JJ6 628 aa33.37■■■□□ 2.93
NUP43-205ENST00000463048 KIF21BO75037 1637 aa33.37■■■□□ 2.93
NUP43-205ENST00000463048 SHROOM2Q13796 1616 aa33.35■■■□□ 2.93
NUP43-205ENST00000463048 CTTNBP2Q8WZ74 1663 aa33.34■■■□□ 2.93
NUP43-205ENST00000463048 IQGAP2Q13576 1575 aa33.34■■■□□ 2.93
NUP43-205ENST00000463048 ERCC6L2Q5T890 1561 aa33.34■■■□□ 2.93
NUP43-205ENST00000463048 PRG4Q92954 1404 aaPredicted RBP33.31■■■□□ 2.92
NUP43-205ENST00000463048 UBTFP17480 764 aaKnown RBP33.23■■■□□ 2.91
NUP43-205ENST00000463048 GOLGA3Q08378 1498 aa33.23■■■□□ 2.91
NUP43-205ENST00000463048 ARAP1Q96P48 1450 aa33.21■■■□□ 2.91
NUP43-205ENST00000463048 RANGAP1P46060 587 aaPredicted RBP33.21■■■□□ 2.91
NUP43-205ENST00000463048 CYB5RLQ6IPT4 315 aa33.21■■■□□ 2.91
NUP43-205ENST00000463048 TTBK1Q5TCY1 1321 aaPredicted RBP33.16■■■□□ 2.9
NUP43-205ENST00000463048 UGGT2Q9NYU1 1516 aa33.12■■■□□ 2.89
NUP43-205ENST00000463048 CARMIL2Q6F5E8 1435 aa33.09■■■□□ 2.89
NUP43-205ENST00000463048 DISP1Q96F81 1524 aa33.07■■■□□ 2.88
NUP43-205ENST00000463048 P3H3Q8IVL6 736 aa33.02■■■□□ 2.88
NUP43-205ENST00000463048 KIAA0556O60303 1618 aa33.02■■■□□ 2.88
NUP43-205ENST00000463048 LOC105371045A0A1W2PR82 267 aa32.97■■■□□ 2.87
NUP43-205ENST00000463048 TNIKQ9UKE5 1360 aa32.96■■■□□ 2.87
NUP43-205ENST00000463048 PTPRGP23470 1445 aa32.94■■■□□ 2.86
NUP43-205ENST00000463048 SAMD9Q5K651 1589 aa32.87■■■□□ 2.85
NUP43-205ENST00000463048 FHOD3Q2V2M9 1422 aa32.81■■■□□ 2.84
NUP43-205ENST00000463048 EFCAB5A4FU69 1503 aa32.77■■■□□ 2.84
NUP43-205ENST00000463048 ADCY10Q96PN6 1610 aa32.74■■■□□ 2.83
NUP43-205ENST00000463048 ARHGAP35Q9NRY4 1499 aa32.74■■■□□ 2.83
NUP43-205ENST00000463048 UACAQ9BZF9 1416 aa32.7■■■□□ 2.83
NUP43-205ENST00000463048 PLB1Q6P1J6 1458 aa32.7■■■□□ 2.83
NUP43-205ENST00000463048 CLIP1P30622 1438 aa32.68■■■□□ 2.82
NUP43-205ENST00000463048 ABCC2Q92887 1545 aa32.63■■■□□ 2.81
NUP43-205ENST00000463048 NPM1P06748 294 aaKnown RBP eCLIP32.63■■■□□ 2.81
NUP43-205ENST00000463048 CEP162Q5TB80 1403 aa32.61■■■□□ 2.81
NUP43-205ENST00000463048 ARID3CA6NKF2 412 aa32.61■■■□□ 2.81
NUP43-205ENST00000463048 ABCA8O94911 1581 aa32.61■■■□□ 2.81
NUP43-205ENST00000463048 UHRF1BP1LA0JNW5 1464 aa32.58■■■□□ 2.81
NUP43-205ENST00000463048 RAPGEF6Q8TEU7 1601 aa32.55■■■□□ 2.8
NUP43-205ENST00000463048 ATP1B4Q9UN42 357 aaPredicted RBP32.52■■■□□ 2.8
NUP43-205ENST00000463048 ZCCHC11Q5TAX3 1644 aaKnown RBP32.48■■■□□ 2.79
NUP43-205ENST00000463048 FMN1Q68DA7 1419 aa32.48■■■□□ 2.79
NUP43-205ENST00000463048 TRHP20396 242 aaPredicted RBP32.47■■■□□ 2.79
NUP43-205ENST00000463048 KDM5BQ9UGL1 1544 aa32.45■■■□□ 2.78
NUP43-205ENST00000463048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.42■■■□□ 2.78
NUP43-205ENST00000463048 HNRNPUL2Q1KMD3 747 aaKnown RBP32.42■■■□□ 2.78
NUP43-205ENST00000463048 NUP153P49790 1475 aaKnown RBP32.42■■■□□ 2.78
NUP43-205ENST00000463048 MAPKBP1O60336 1514 aa32.37■■■□□ 2.77
NUP43-205ENST00000463048 ATP10BO94823 1461 aa32.37■■■□□ 2.77
NUP43-205ENST00000463048 PCF11O94913 1555 aaKnown RBP32.36■■■□□ 2.77
NUP43-205ENST00000463048 ASXL2Q76L83 1435 aa32.36■■■□□ 2.77
NUP43-205ENST00000463048 HECW1Q76N89 1606 aa32.33■■■□□ 2.77
NUP43-205ENST00000463048 CDK13Q14004 1512 aaKnown RBP32.31■■■□□ 2.76
NUP43-205ENST00000463048 CASKIN1Q8WXD9 1431 aa32.28■■■□□ 2.76
NUP43-205ENST00000463048 FAM69CQ0P6D2 419 aa32.25■■■□□ 2.75
NUP43-205ENST00000463048 LRRIQ1Q96JM4 1722 aa32.24■■■□□ 2.75
NUP43-205ENST00000463048 KCNH8Q96L42 1107 aa32.24■■■□□ 2.75
NUP43-205ENST00000463048 EPRSP07814 1512 aaKnown RBP32.24■■■□□ 2.75
NUP43-205ENST00000463048 WDR7Q9Y4E6 1490 aa32.23■■■□□ 2.75
NUP43-205ENST00000463048 ABCC10Q5T3U5 1492 aa32.22■■■□□ 2.75
NUP43-205ENST00000463048 FYCO1Q9BQS8 1478 aa32.22■■■□□ 2.75
NUP43-205ENST00000463048 KIF13AQ9H1H9 1805 aa32.21■■■□□ 2.75
NUP43-205ENST00000463048 DIP2BQ9P265 1576 aa32.21■■■□□ 2.75
NUP43-205ENST00000463048 VPS8Q8N3P4 1428 aa32.16■■■□□ 2.74
NUP43-205ENST00000463048 PLEKHD1A6NEE1 506 aa32.14■■■□□ 2.74
NUP43-205ENST00000463048 CCDC18Q5T9S5 1454 aa32.1■■■□□ 2.73
NUP43-205ENST00000463048 TSPOAP1O95153 1857 aa32.06■■■□□ 2.72
NUP43-205ENST00000463048 CDK11AQ9UQ88 783 aaPredicted RBP32.06■■■□□ 2.72
NUP43-205ENST00000463048 GLI2P10070 1586 aa32.03■■■□□ 2.72
NUP43-205ENST00000463048 MAGI3Q5TCQ9 1506 aa31.98■■■□□ 2.71
NUP43-205ENST00000463048 TROQ12816 1431 aaPredicted RBP31.95■■■□□ 2.71
NUP43-205ENST00000463048 MAP3K4Q9Y6R4 1608 aa31.95■■■□□ 2.71
NUP43-205ENST00000463048 KIF14Q15058 1648 aa31.93■■■□□ 2.7
NUP43-205ENST00000463048 CFAP43Q8NDM7 1665 aa31.92■■■□□ 2.7
NUP43-205ENST00000463048 CD109Q6YHK3 1445 aa31.92■■■□□ 2.7
NUP43-205ENST00000463048 ABCA9Q8IUA7 1624 aa31.9■■■□□ 2.7
NUP43-205ENST00000463048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.9■■■□□ 2.7
NUP43-205ENST00000463048 TIAM1Q13009 1591 aa31.9■■■□□ 2.7
NUP43-205ENST00000463048 MTUS2Q5JR59 1369 aa31.89■■■□□ 2.7
NUP43-205ENST00000463048 TTC37Q6PGP7 1564 aa31.89■■■□□ 2.7
NUP43-205ENST00000463048 PPRC1Q5VV67 1664 aaKnown RBP31.87■■■□□ 2.69
NUP43-205ENST00000463048 APLP2Q06481 763 aa31.87■■■□□ 2.69
NUP43-205ENST00000463048 KANK4Q5T7N3 995 aaPredicted RBP31.79■■■□□ 2.68
NUP43-205ENST00000463048 EHBP1L1Q8N3D4 1523 aa31.79■■■□□ 2.68
NUP43-205ENST00000463048 TEX14Q8IWB6 1497 aa31.76■■■□□ 2.67
NUP43-205ENST00000463048 LRRC9Q6ZRR7 1453 aa31.74■■■□□ 2.67
NUP43-205ENST00000463048 MAP3K1Q13233 1512 aa31.73■■■□□ 2.67
NUP43-205ENST00000463048 MYO5CQ9NQX4 1742 aa31.72■■■□□ 2.67
NUP43-205ENST00000463048 PLCH2O75038 1416 aa31.66■■■□□ 2.66
NUP43-205ENST00000463048 SUPT6HQ7KZ85 1726 aaKnown RBP31.66■■■□□ 2.66
NUP43-205ENST00000463048 FANCAO15360 1455 aa31.65■■■□□ 2.66
NUP43-205ENST00000463048 ARHGAP5Q13017 1502 aa31.65■■■□□ 2.66
NUP43-205ENST00000463048 KDM6BO15054 1643 aa31.64■■■□□ 2.66
NUP43-205ENST00000463048 PPARGC1BQ86YN6 1023 aaKnown RBP31.64■■■□□ 2.66
NUP43-205ENST00000463048 CCNB3Q8WWL7 1395 aa31.64■■■□□ 2.66
NUP43-205ENST00000463048 NCOA2Q15596 1464 aa31.64■■■□□ 2.66
NUP43-205ENST00000463048 CDC42BPAQ5VT25 1732 aa31.63■■■□□ 2.65
NUP43-205ENST00000463048 CDC42BPBQ9Y5S2 1711 aa31.61■■■□□ 2.65
NUP43-205ENST00000463048 PREX2Q70Z35 1606 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms