RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 CUL7Q14999 1698 aa26.33■■□□□ 1.81
COL16A1-206ENST00000461217 IGF1RP08069 1367 aa26.3■■□□□ 1.8
COL16A1-206ENST00000461217 KIAA0586Q9BVV6 1533 aa26.24■■□□□ 1.79
COL16A1-206ENST00000461217 NPM1P06748 294 aaKnown RBP eCLIP26.16■■□□□ 1.78
COL16A1-206ENST00000461217 CARMIL1Q5VZK9 1371 aa26.16■■□□□ 1.78
COL16A1-206ENST00000461217 KIF13AQ9H1H9 1805 aa26.14■■□□□ 1.78
COL16A1-206ENST00000461217 ADCY10Q96PN6 1610 aa26.11■■□□□ 1.77
COL16A1-206ENST00000461217 MAPKBP1O60336 1514 aa26.07■■□□□ 1.76
COL16A1-206ENST00000461217 AEBP2Q6ZN18 517 aaPredicted RBP26.05■■□□□ 1.76
COL16A1-206ENST00000461217 TTBK1Q5TCY1 1321 aaPredicted RBP26.04■■□□□ 1.76
COL16A1-206ENST00000461217 ABCC10Q5T3U5 1492 aa26.04■■□□□ 1.76
COL16A1-206ENST00000461217 IQGAP2Q13576 1575 aa26.03■■□□□ 1.76
COL16A1-206ENST00000461217 FAM69CQ0P6D2 419 aa26.03■■□□□ 1.76
COL16A1-206ENST00000461217 CARMIL2Q6F5E8 1435 aa26.03■■□□□ 1.76
COL16A1-206ENST00000461217 PTPRGP23470 1445 aa26.01■■□□□ 1.75
COL16A1-206ENST00000461217 DIP2BQ9P265 1576 aa26■■□□□ 1.75
COL16A1-206ENST00000461217 TNIKQ9UKE5 1360 aa25.96■■□□□ 1.75
COL16A1-206ENST00000461217 RAPGEF2Q9Y4G8 1499 aa25.95■■□□□ 1.74
COL16A1-206ENST00000461217 ABCC2Q92887 1545 aa25.87■■□□□ 1.73
COL16A1-206ENST00000461217 DISP1Q96F81 1524 aa25.86■■□□□ 1.73
COL16A1-206ENST00000461217 TSPOAP1O95153 1857 aa25.83■■□□□ 1.73
COL16A1-206ENST00000461217 UGGT2Q9NYU1 1516 aa25.83■■□□□ 1.72
COL16A1-206ENST00000461217 KDM6BO15054 1643 aa25.81■■□□□ 1.72
COL16A1-206ENST00000461217 UACAQ9BZF9 1416 aa25.8■■□□□ 1.72
COL16A1-206ENST00000461217 UHRF1BP1LA0JNW5 1464 aa25.8■■□□□ 1.72
COL16A1-206ENST00000461217 KIAA0556O60303 1618 aa25.8■■□□□ 1.72
COL16A1-206ENST00000461217 ASXL2Q76L83 1435 aa25.78■■□□□ 1.72
COL16A1-206ENST00000461217 CTTNBP2Q8WZ74 1663 aa25.77■■□□□ 1.72
COL16A1-206ENST00000461217 PLB1Q6P1J6 1458 aa25.77■■□□□ 1.72
COL16A1-206ENST00000461217 GLI2P10070 1586 aa25.69■■□□□ 1.7
COL16A1-206ENST00000461217 KDM5BQ9UGL1 1544 aa25.68■■□□□ 1.7
COL16A1-206ENST00000461217 ZCCHC11Q5TAX3 1644 aaKnown RBP25.68■■□□□ 1.7
COL16A1-206ENST00000461217 GOLGA3Q08378 1498 aa25.66■■□□□ 1.7
COL16A1-206ENST00000461217 PRXQ9BXM0 1461 aa25.65■■□□□ 1.7
COL16A1-206ENST00000461217 EPRSP07814 1512 aaKnown RBP25.62■■□□□ 1.69
COL16A1-206ENST00000461217 PPRC1Q5VV67 1664 aaKnown RBP25.61■■□□□ 1.69
COL16A1-206ENST00000461217 MAP3K4Q9Y6R4 1608 aa25.57■■□□□ 1.68
COL16A1-206ENST00000461217 WDR7Q9Y4E6 1490 aa25.54■■□□□ 1.68
COL16A1-206ENST00000461217 TEX14Q8IWB6 1497 aa25.53■■□□□ 1.68
COL16A1-206ENST00000461217 ABCA8O94911 1581 aa25.52■■□□□ 1.68
COL16A1-206ENST00000461217 FAM9AQ8IZU1 332 aaPredicted RBP25.48■■□□□ 1.67
COL16A1-206ENST00000461217 CSRNP3Q8WYN3 585 aa25.47■■□□□ 1.67
COL16A1-206ENST00000461217 KDM4FA0A1W2PPD8 638 aa25.45■■□□□ 1.66
COL16A1-206ENST00000461217 P3H3Q8IVL6 736 aa25.45■■□□□ 1.66
COL16A1-206ENST00000461217 KCNH8Q96L42 1107 aa25.42■■□□□ 1.66
COL16A1-206ENST00000461217 COL17A1Q9UMD9 1497 aaPredicted RBP25.41■■□□□ 1.66
COL16A1-206ENST00000461217 CFAP43Q8NDM7 1665 aa25.4■■□□□ 1.66
COL16A1-206ENST00000461217 EEA1Q15075 1411 aa25.39■■□□□ 1.66
COL16A1-206ENST00000461217 ARID3CA6NKF2 412 aa25.39■■□□□ 1.66
COL16A1-206ENST00000461217 CD109Q6YHK3 1445 aa25.38■■□□□ 1.65
COL16A1-206ENST00000461217 SAMD9Q5K651 1589 aa25.36■■□□□ 1.65
COL16A1-206ENST00000461217 MAGI3Q5TCQ9 1506 aa25.34■■□□□ 1.65
COL16A1-206ENST00000461217 RANGAP1P46060 587 aaPredicted RBP25.32■■□□□ 1.64
COL16A1-206ENST00000461217 ADGRL1O94910 1474 aa25.32■■□□□ 1.64
COL16A1-206ENST00000461217 ATP10BO94823 1461 aa25.3■■□□□ 1.64
COL16A1-206ENST00000461217 RAPGEF6Q8TEU7 1601 aa25.3■■□□□ 1.64
COL16A1-206ENST00000461217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.25■■□□□ 1.63
COL16A1-206ENST00000461217 HNRNPUL2Q1KMD3 747 aaKnown RBP25.25■■□□□ 1.63
COL16A1-206ENST00000461217 FHOD3Q2V2M9 1422 aa25.21■■□□□ 1.63
COL16A1-206ENST00000461217 KIF21BO75037 1637 aa25.2■■□□□ 1.62
COL16A1-206ENST00000461217 ABCA9Q8IUA7 1624 aa25.19■■□□□ 1.62
COL16A1-206ENST00000461217 NUP153P49790 1475 aaKnown RBP25.17■■□□□ 1.62
COL16A1-206ENST00000461217 EFCAB5A4FU69 1503 aa25.14■■□□□ 1.62
COL16A1-206ENST00000461217 ARAP3Q8WWN8 1544 aa25.13■■□□□ 1.61
COL16A1-206ENST00000461217 EHMT2Q96KQ7 1210 aa25.09■■□□□ 1.61
COL16A1-206ENST00000461217 PHLDB1Q86UU1 1377 aa25.08■■□□□ 1.61
COL16A1-206ENST00000461217 NEO1Q92859 1461 aa25.06■■□□□ 1.6
COL16A1-206ENST00000461217 PLEKHD1A6NEE1 506 aa25.05■■□□□ 1.6
COL16A1-206ENST00000461217 UBTFP17480 764 aaKnown RBP25.04■■□□□ 1.6
COL16A1-206ENST00000461217 RAPGEF3O95398 923 aa25■■□□□ 1.59
COL16A1-206ENST00000461217 CHIC1Q5VXU3 224 aa25■■□□□ 1.59
COL16A1-206ENST00000461217 HECW2Q9P2P5 1572 aa24.97■■□□□ 1.59
COL16A1-206ENST00000461217 CDK13Q14004 1512 aaKnown RBP24.96■■□□□ 1.59
COL16A1-206ENST00000461217 FRMPD1Q5SYB0 1578 aa24.95■■□□□ 1.58
COL16A1-206ENST00000461217 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.95■■□□□ 1.58
COL16A1-206ENST00000461217 CFAP74Q9C0B2 1584 aa24.94■■□□□ 1.58
COL16A1-206ENST00000461217 ATP1B4Q9UN42 357 aaPredicted RBP24.93■■□□□ 1.58
COL16A1-206ENST00000461217 TTC37Q6PGP7 1564 aa24.93■■□□□ 1.58
COL16A1-206ENST00000461217 FANCAO15360 1455 aa24.92■■□□□ 1.58
COL16A1-206ENST00000461217 FMN1Q68DA7 1419 aa24.92■■□□□ 1.58
COL16A1-206ENST00000461217 HECW1Q76N89 1606 aa24.91■■□□□ 1.58
COL16A1-206ENST00000461217 DENND4BO75064 1496 aaPredicted RBP24.89■■□□□ 1.58
COL16A1-206ENST00000461217 AKNAQ7Z591 1439 aa24.89■■□□□ 1.58
COL16A1-206ENST00000461217 ARHGAP35Q9NRY4 1499 aa24.89■■□□□ 1.57
COL16A1-206ENST00000461217 ARID4BQ4LE39 1312 aaPredicted RBP24.87■■□□□ 1.57
COL16A1-206ENST00000461217 RICTORQ6R327 1708 aa24.86■■□□□ 1.57
COL16A1-206ENST00000461217 ARHGEF40Q8TER5 1519 aa24.85■■□□□ 1.57
COL16A1-206ENST00000461217 ADAMTSL3P82987 1691 aa24.84■■□□□ 1.57
COL16A1-206ENST00000461217 BCORL1Q5H9F3 1711 aa24.81■■□□□ 1.56
COL16A1-206ENST00000461217 CDK11AQ9UQ88 783 aaPredicted RBP24.8■■□□□ 1.56
COL16A1-206ENST00000461217 PTPRMP28827 1452 aa24.8■■□□□ 1.56
COL16A1-206ENST00000461217 MADDQ8WXG6 1647 aa24.78■■□□□ 1.56
COL16A1-206ENST00000461217 PLCH2O75038 1416 aa24.78■■□□□ 1.56
COL16A1-206ENST00000461217 ZMYM4Q5VZL5 1548 aa24.77■■□□□ 1.56
COL16A1-206ENST00000461217 ZFYVE16Q7Z3T8 1539 aa24.76■■□□□ 1.55
COL16A1-206ENST00000461217 MYO5CQ9NQX4 1742 aa24.76■■□□□ 1.55
COL16A1-206ENST00000461217 KIF14Q15058 1648 aa24.75■■□□□ 1.55
COL16A1-206ENST00000461217 SCAPERQ9BY12 1400 aa24.73■■□□□ 1.55
COL16A1-206ENST00000461217 CLIP1P30622 1438 aa24.72■■□□□ 1.55
COL16A1-206ENST00000461217 TROQ12816 1431 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms