RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 ABCA5Q8WWZ7 1642 aa16.75■□□□□ 0.27
VPS45-204ENST00000460366 KIF27Q86VH2 1401 aa16.74■□□□□ 0.27
VPS45-204ENST00000460366 MAGI1Q96QZ7 1491 aaPredicted RBP16.71■□□□□ 0.27
VPS45-204ENST00000460366 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
VPS45-204ENST00000460366 SNAPC4Q5SXM2 1469 aa16.68■□□□□ 0.26
VPS45-204ENST00000460366 IGF1RP08069 1367 aa16.67■□□□□ 0.26
VPS45-204ENST00000460366 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
VPS45-204ENST00000460366 CHMP7Q8WUX9 453 aaPredicted RBP16.64■□□□□ 0.25
VPS45-204ENST00000460366 PBRM1Q86U86 1689 aa16.64■□□□□ 0.25
VPS45-204ENST00000460366 FHAD1B1AJZ9 1412 aa16.63■□□□□ 0.25
VPS45-204ENST00000460366 SYNJ2O15056 1496 aa16.63■□□□□ 0.25
VPS45-204ENST00000460366 FBLN2P98095 1184 aa16.61■□□□□ 0.25
VPS45-204ENST00000460366 EEA1Q15075 1411 aa16.58■□□□□ 0.24
VPS45-204ENST00000460366 RUSC2Q8N2Y8 1516 aa16.58■□□□□ 0.24
VPS45-204ENST00000460366 ADAMTS12P58397 1594 aa16.57■□□□□ 0.24
VPS45-204ENST00000460366 CARMIL1Q5VZK9 1371 aa16.57■□□□□ 0.24
VPS45-204ENST00000460366 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
VPS45-204ENST00000460366 CUL7Q14999 1698 aa16.53■□□□□ 0.24
VPS45-204ENST00000460366 CSRNP3Q8WYN3 585 aa16.53■□□□□ 0.24
VPS45-204ENST00000460366 SPINK5Q9NQ38 1064 aaPredicted RBP16.53■□□□□ 0.24
VPS45-204ENST00000460366 CHD1O14646 1710 aa16.52■□□□□ 0.24
VPS45-204ENST00000460366 NUP160Q12769 1436 aa16.49■□□□□ 0.23
VPS45-204ENST00000460366 PRXQ9BXM0 1461 aa16.47■□□□□ 0.23
VPS45-204ENST00000460366 RAPGEF2Q9Y4G8 1499 aa16.47■□□□□ 0.23
VPS45-204ENST00000460366 FOXD4L1Q9NU39 408 aa16.46■□□□□ 0.23
VPS45-204ENST00000460366 ZBTB22O15209 634 aa16.43■□□□□ 0.22
VPS45-204ENST00000460366 MYCNP04198 464 aaPredicted RBP16.43■□□□□ 0.22
VPS45-204ENST00000460366 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
VPS45-204ENST00000460366 CAPN15O75808 1086 aa16.42■□□□□ 0.22
VPS45-204ENST00000460366 FAM9AQ8IZU1 332 aaPredicted RBP16.42■□□□□ 0.22
VPS45-204ENST00000460366 CEP170Q5SW79 1584 aa16.4■□□□□ 0.22
VPS45-204ENST00000460366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
VPS45-204ENST00000460366 HNRNPUL2Q1KMD3 747 aaKnown RBP16.4■□□□□ 0.22
VPS45-204ENST00000460366 KIAA0586Q9BVV6 1533 aa16.38■□□□□ 0.21
VPS45-204ENST00000460366 SAMD1Q6SPF0 538 aaPredicted RBP16.35■□□□□ 0.21
VPS45-204ENST00000460366 JPH4Q96JJ6 628 aa16.35■□□□□ 0.21
VPS45-204ENST00000460366 KIF21BO75037 1637 aa16.31■□□□□ 0.2
VPS45-204ENST00000460366 APLP2Q06481 763 aa16.29■□□□□ 0.2
VPS45-204ENST00000460366 SHROOM2Q13796 1616 aa16.28■□□□□ 0.2
VPS45-204ENST00000460366 DSG3P32926 999 aa16.28■□□□□ 0.2
VPS45-204ENST00000460366 ARHGEF11O15085 1522 aa16.28■□□□□ 0.2
VPS45-204ENST00000460366 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
VPS45-204ENST00000460366 PRG4Q92954 1404 aaPredicted RBP16.26■□□□□ 0.19
VPS45-204ENST00000460366 IQGAP2Q13576 1575 aa16.26■□□□□ 0.19
VPS45-204ENST00000460366 GOLGA3Q08378 1498 aa16.25■□□□□ 0.19
VPS45-204ENST00000460366 RIMBP3CA6NJZ7 1639 aa16.23■□□□□ 0.19
VPS45-204ENST00000460366 RIMBP3BA6NNM3 1639 aa16.23■□□□□ 0.19
VPS45-204ENST00000460366 RIMBP3Q9UFD9 1639 aa16.23■□□□□ 0.19
VPS45-204ENST00000460366 UGGT2Q9NYU1 1516 aa16.22■□□□□ 0.19
VPS45-204ENST00000460366 UBTFP17480 764 aaKnown RBP16.21■□□□□ 0.19
VPS45-204ENST00000460366 CARMIL2Q6F5E8 1435 aa16.2■□□□□ 0.18
VPS45-204ENST00000460366 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
VPS45-204ENST00000460366 CTTNBP2Q8WZ74 1663 aa16.2■□□□□ 0.18
VPS45-204ENST00000460366 ARAP1Q96P48 1450 aa16.17■□□□□ 0.18
VPS45-204ENST00000460366 ERCC6L2Q5T890 1561 aa16.17■□□□□ 0.18
VPS45-204ENST00000460366 CYB5RLQ6IPT4 315 aa16.16■□□□□ 0.18
VPS45-204ENST00000460366 DISP1Q96F81 1524 aa16.15■□□□□ 0.18
VPS45-204ENST00000460366 TNIKQ9UKE5 1360 aa16.14■□□□□ 0.17
VPS45-204ENST00000460366 EHMT2Q96KQ7 1210 aa16.14■□□□□ 0.17
VPS45-204ENST00000460366 ABCB7O75027 752 aa16.12■□□□□ 0.17
VPS45-204ENST00000460366 ATF5Q9Y2D1 282 aaPredicted RBP16.12■□□□□ 0.17
VPS45-204ENST00000460366 PTPRGP23470 1445 aa16.11■□□□□ 0.17
VPS45-204ENST00000460366 KIAA0556O60303 1618 aa16.08■□□□□ 0.17
VPS45-204ENST00000460366 SAMD9Q5K651 1589 aa16.05■□□□□ 0.16
VPS45-204ENST00000460366 EFCAB5A4FU69 1503 aa16.05■□□□□ 0.16
VPS45-204ENST00000460366 LOC105371045A0A1W2PR82 267 aa16.05■□□□□ 0.16
VPS45-204ENST00000460366 RANGAP1P46060 587 aaPredicted RBP16.03■□□□□ 0.16
VPS45-204ENST00000460366 P3H3Q8IVL6 736 aa16.03■□□□□ 0.16
VPS45-204ENST00000460366 UACAQ9BZF9 1416 aa16.01■□□□□ 0.15
VPS45-204ENST00000460366 TTBK1Q5TCY1 1321 aaPredicted RBP15.99■□□□□ 0.15
VPS45-204ENST00000460366 UHRF1BP1LA0JNW5 1464 aa15.99■□□□□ 0.15
VPS45-204ENST00000460366 ARHGAP35Q9NRY4 1499 aa15.99■□□□□ 0.15
VPS45-204ENST00000460366 CLIP1P30622 1438 aa15.97■□□□□ 0.15
VPS45-204ENST00000460366 FHOD3Q2V2M9 1422 aa15.97■□□□□ 0.15
VPS45-204ENST00000460366 NPM1P06748 294 aaKnown RBP eCLIP15.96■□□□□ 0.15
VPS45-204ENST00000460366 ABCC2Q92887 1545 aa15.94■□□□□ 0.14
VPS45-204ENST00000460366 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
VPS45-204ENST00000460366 FMN1Q68DA7 1419 aa15.94■□□□□ 0.14
VPS45-204ENST00000460366 ABCA8O94911 1581 aa15.93■□□□□ 0.14
VPS45-204ENST00000460366 PLB1Q6P1J6 1458 aa15.93■□□□□ 0.14
VPS45-204ENST00000460366 ADCY10Q96PN6 1610 aa15.92■□□□□ 0.14
VPS45-204ENST00000460366 POLA2Q14181 598 aa15.91■□□□□ 0.14
VPS45-204ENST00000460366 KDM5BQ9UGL1 1544 aa15.89■□□□□ 0.13
VPS45-204ENST00000460366 ATXN8OSP0DMR3 200 aa15.89■□□□□ 0.13
VPS45-204ENST00000460366 RAPGEF6Q8TEU7 1601 aa15.86■□□□□ 0.13
VPS45-204ENST00000460366 MAPKBP1O60336 1514 aa15.84■□□□□ 0.13
VPS45-204ENST00000460366 ATP10BO94823 1461 aa15.83■□□□□ 0.12
VPS45-204ENST00000460366 NUP153P49790 1475 aaKnown RBP15.83■□□□□ 0.12
VPS45-204ENST00000460366 CASKIN1Q8WXD9 1431 aa15.82■□□□□ 0.12
VPS45-204ENST00000460366 ASXL2Q76L83 1435 aa15.79■□□□□ 0.12
VPS45-204ENST00000460366 ZCCHC11Q5TAX3 1644 aaKnown RBP15.79■□□□□ 0.12
VPS45-204ENST00000460366 ATP1B4Q9UN42 357 aaPredicted RBP15.77■□□□□ 0.12
VPS45-204ENST00000460366 FYCO1Q9BQS8 1478 aa15.77■□□□□ 0.11
VPS45-204ENST00000460366 HECW1Q76N89 1606 aa15.76■□□□□ 0.11
VPS45-204ENST00000460366 ARID3CA6NKF2 412 aa15.76■□□□□ 0.11
VPS45-204ENST00000460366 EPRSP07814 1512 aaKnown RBP15.75■□□□□ 0.11
VPS45-204ENST00000460366 PLEKHD1A6NEE1 506 aa15.75■□□□□ 0.11
VPS45-204ENST00000460366 CDK11AQ9UQ88 783 aaPredicted RBP15.75■□□□□ 0.11
VPS45-204ENST00000460366 ABCC10Q5T3U5 1492 aa15.75■□□□□ 0.11
VPS45-204ENST00000460366 VPS8Q8N3P4 1428 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms