RNA–Protein interactions for RNA: ENST00000459988.1

UBAP2-208, Transcript of ubiquitin associated protein 2, humanhuman

TSL 2

Gene UBAP2, Length 2,628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-208ENST00000459988 NUP160Q12769 1436 aa12.1□□□□□ -0.47
UBAP2-208ENST00000459988 FAM69CQ0P6D2 419 aa12.1□□□□□ -0.47
UBAP2-208ENST00000459988 PPRC1Q5VV67 1664 aaKnown RBP12.1□□□□□ -0.47
UBAP2-208ENST00000459988 PCF11O94913 1555 aaKnown RBP12.09□□□□□ -0.47
UBAP2-208ENST00000459988 TOP2AP11388 1531 aaKnown RBP12.09□□□□□ -0.47
UBAP2-208ENST00000459988 FBLN2P98095 1184 aa12.09□□□□□ -0.47
UBAP2-208ENST00000459988 TEX14Q8IWB6 1497 aa12.08□□□□□ -0.48
UBAP2-208ENST00000459988 CERKQ8TCT0 537 aa12.07□□□□□ -0.48
UBAP2-208ENST00000459988 NPM1P06748 294 aaKnown RBP eCLIP12.04□□□□□ -0.48
UBAP2-208ENST00000459988 ADAMTSL3P82987 1691 aa12.01□□□□□ -0.49
UBAP2-208ENST00000459988 TSPOAP1O95153 1857 aa12.01□□□□□ -0.49
UBAP2-208ENST00000459988 WIZO95785 1651 aa12□□□□□ -0.49
UBAP2-208ENST00000459988 GRIN2AQ12879 1464 aa11.99□□□□□ -0.49
UBAP2-208ENST00000459988 SOGA1O94964 1423 aa11.99□□□□□ -0.49
UBAP2-208ENST00000459988 ADCY10Q96PN6 1610 aa11.98□□□□□ -0.49
UBAP2-208ENST00000459988 MAP3K4Q9Y6R4 1608 aa11.97□□□□□ -0.49
UBAP2-208ENST00000459988 PLB1Q6P1J6 1458 aa11.97□□□□□ -0.49
UBAP2-208ENST00000459988 ABCA5Q8WWZ7 1642 aa11.96□□□□□ -0.49
UBAP2-208ENST00000459988 ADAMTS12P58397 1594 aa11.93□□□□□ -0.5
UBAP2-208ENST00000459988 PTPRMP28827 1452 aa11.92□□□□□ -0.5
UBAP2-208ENST00000459988 TDRD9Q8NDG6 1382 aaKnown RBP11.86□□□□□ -0.51
UBAP2-208ENST00000459988 PLPPR3Q6T4P5 718 aa11.86□□□□□ -0.51
UBAP2-208ENST00000459988 RAD54L2Q9Y4B4 1467 aa11.85□□□□□ -0.51
UBAP2-208ENST00000459988 ABCA10Q8WWZ4 1543 aa11.84□□□□□ -0.51
UBAP2-208ENST00000459988 UHRF1BP1LA0JNW5 1464 aa11.83□□□□□ -0.52
UBAP2-208ENST00000459988 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
UBAP2-208ENST00000459988 PRG4Q92954 1404 aaPredicted RBP11.83□□□□□ -0.52
UBAP2-208ENST00000459988 DMRT2Q9Y5R5 561 aa11.82□□□□□ -0.52
UBAP2-208ENST00000459988 BCORL1Q5H9F3 1711 aa11.82□□□□□ -0.52
UBAP2-208ENST00000459988 FHAD1B1AJZ9 1412 aa11.81□□□□□ -0.52
UBAP2-208ENST00000459988 MAGI3Q5TCQ9 1506 aa11.8□□□□□ -0.52
UBAP2-208ENST00000459988 CFAP43Q8NDM7 1665 aa11.79□□□□□ -0.52
UBAP2-208ENST00000459988 PTPRTO14522 1441 aa11.79□□□□□ -0.52
UBAP2-208ENST00000459988 ABCC2Q92887 1545 aa11.78□□□□□ -0.52
UBAP2-208ENST00000459988 KIF21BO75037 1637 aa11.78□□□□□ -0.52
UBAP2-208ENST00000459988 COL17A1Q9UMD9 1497 aaPredicted RBP11.78□□□□□ -0.52
UBAP2-208ENST00000459988 PHLDB1Q86UU1 1377 aa11.78□□□□□ -0.52
UBAP2-208ENST00000459988 MED1Q15648 1581 aaPredicted RBP11.78□□□□□ -0.52
UBAP2-208ENST00000459988 RUSC2Q8N2Y8 1516 aa11.77□□□□□ -0.53
UBAP2-208ENST00000459988 ERICH3Q5RHP9 1530 aa11.76□□□□□ -0.53
UBAP2-208ENST00000459988 ARAP3Q8WWN8 1544 aa11.74□□□□□ -0.53
UBAP2-208ENST00000459988 EPRSP07814 1512 aaKnown RBP11.73□□□□□ -0.53
UBAP2-208ENST00000459988 PREX1Q8TCU6 1659 aa11.72□□□□□ -0.53
UBAP2-208ENST00000459988 ASXL2Q76L83 1435 aa11.7□□□□□ -0.54
UBAP2-208ENST00000459988 CCDC88BA6NC98 1476 aa11.69□□□□□ -0.54
UBAP2-208ENST00000459988 MADDQ8WXG6 1647 aa11.68□□□□□ -0.54
UBAP2-208ENST00000459988 YEATS2Q9ULM3 1422 aa11.68□□□□□ -0.54
UBAP2-208ENST00000459988 LTBP4Q8N2S1 1624 aa11.68□□□□□ -0.54
UBAP2-208ENST00000459988 CUL7Q14999 1698 aa11.64□□□□□ -0.55
UBAP2-208ENST00000459988 JPH4Q96JJ6 628 aa11.64□□□□□ -0.55
UBAP2-208ENST00000459988 CUX1P39880 1505 aa11.63□□□□□ -0.55
UBAP2-208ENST00000459988 TTC37Q6PGP7 1564 aa11.63□□□□□ -0.55
UBAP2-208ENST00000459988 KDM5BQ9UGL1 1544 aa11.63□□□□□ -0.55
UBAP2-208ENST00000459988 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
UBAP2-208ENST00000459988 RIMS1Q86UR5 1692 aaKnown RBP11.62□□□□□ -0.55
UBAP2-208ENST00000459988 CSRNP3Q8WYN3 585 aa11.61□□□□□ -0.55
UBAP2-208ENST00000459988 STRCQ7RTU9 1775 aa11.61□□□□□ -0.55
UBAP2-208ENST00000459988 KCNA4P22459 653 aa11.59□□□□□ -0.55
UBAP2-208ENST00000459988 POGZQ7Z3K3 1410 aa11.58□□□□□ -0.56
UBAP2-208ENST00000459988 ARHGEF40Q8TER5 1519 aa11.55□□□□□ -0.56
UBAP2-208ENST00000459988 PTPRGP23470 1445 aa11.52□□□□□ -0.57
UBAP2-208ENST00000459988 TNIKQ9UKE5 1360 aa11.52□□□□□ -0.57
UBAP2-208ENST00000459988 ZCCHC11Q5TAX3 1644 aaKnown RBP11.51□□□□□ -0.57
UBAP2-208ENST00000459988 WDR7Q9Y4E6 1490 aa11.51□□□□□ -0.57
UBAP2-208ENST00000459988 FANCAO15360 1455 aa11.51□□□□□ -0.57
UBAP2-208ENST00000459988 CARMIL2Q6F5E8 1435 aa11.49□□□□□ -0.57
UBAP2-208ENST00000459988 NEO1Q92859 1461 aa11.49□□□□□ -0.57
UBAP2-208ENST00000459988 UACAQ9BZF9 1416 aa11.49□□□□□ -0.57
UBAP2-208ENST00000459988 FER1L4A9Z1Z3 1794 aa11.48□□□□□ -0.57
UBAP2-208ENST00000459988 SETD1BQ9UPS6 1966 aaKnown RBP11.47□□□□□ -0.57
UBAP2-208ENST00000459988 AMER1Q5JTC6 1135 aaPredicted RBP11.47□□□□□ -0.57
UBAP2-208ENST00000459988 CD109Q6YHK3 1445 aa11.46□□□□□ -0.58
UBAP2-208ENST00000459988 WRNQ14191 1432 aaPredicted RBP eCLIP11.43□□□□□ -0.58
UBAP2-208ENST00000459988 ZMYM4Q5VZL5 1548 aa11.43□□□□□ -0.58
UBAP2-208ENST00000459988 BIVM-ERCC5R4GMW8 1640 aa11.43□□□□□ -0.58
UBAP2-208ENST00000459988 MAGI2Q86UL8 1455 aa11.42□□□□□ -0.58
UBAP2-208ENST00000459988 UHRF1BP1Q6BDS2 1440 aa11.4□□□□□ -0.58
UBAP2-208ENST00000459988 CFAP74Q9C0B2 1584 aa11.4□□□□□ -0.58
UBAP2-208ENST00000459988 EFCAB5A4FU69 1503 aa11.4□□□□□ -0.58
UBAP2-208ENST00000459988 ARHGEF12Q9NZN5 1544 aa11.4□□□□□ -0.58
UBAP2-208ENST00000459988 FRMPD1Q5SYB0 1578 aa11.39□□□□□ -0.59
UBAP2-208ENST00000459988 CPS1P31327 1500 aa11.38□□□□□ -0.59
UBAP2-208ENST00000459988 AKNAQ7Z591 1439 aa11.37□□□□□ -0.59
UBAP2-208ENST00000459988 ABCA9Q8IUA7 1624 aa11.37□□□□□ -0.59
UBAP2-208ENST00000459988 KIAA0556O60303 1618 aa11.36□□□□□ -0.59
UBAP2-208ENST00000459988 NCOA1Q15788 1441 aa11.36□□□□□ -0.59
UBAP2-208ENST00000459988 HSPA2P54652 639 aa11.35□□□□□ -0.59
UBAP2-208ENST00000459988 FOXD1Q16676 465 aa11.35□□□□□ -0.59
UBAP2-208ENST00000459988 SUPT5HO00267 1087 aaKnown RBP11.32□□□□□ -0.6
UBAP2-208ENST00000459988 PTPRKQ15262 1439 aa11.32□□□□□ -0.6
UBAP2-208ENST00000459988 FHOD3Q2V2M9 1422 aa11.32□□□□□ -0.6
UBAP2-208ENST00000459988 RICTORQ6R327 1708 aa11.31□□□□□ -0.6
UBAP2-208ENST00000459988 PLA2R1Q13018 1463 aa11.31□□□□□ -0.6
UBAP2-208ENST00000459988 UBAP1LF5GYI3 381 aa11.3□□□□□ -0.6
UBAP2-208ENST00000459988 IFFO2Q5TF58 517 aa11.29□□□□□ -0.6
UBAP2-208ENST00000459988 REREQ9P2R6 1566 aa11.27□□□□□ -0.61
UBAP2-208ENST00000459988 ZFYVE16Q7Z3T8 1539 aa11.26□□□□□ -0.61
UBAP2-208ENST00000459988 ZNF142P52746 1687 aaPredicted RBP11.26□□□□□ -0.61
UBAP2-208ENST00000459988 IQGAP2Q13576 1575 aa11.26□□□□□ -0.61
UBAP2-208ENST00000459988 UGGT2Q9NYU1 1516 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms