RNA–Protein interactions for RNA: ENST00000459988.1

UBAP2-208, Transcript of ubiquitin associated protein 2, humanhuman

TSL 2

Gene UBAP2, Length 2,628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-208ENST00000459988 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
UBAP2-208ENST00000459988 ABCC9O60706 1549 aa15.84■□□□□ 0.13
UBAP2-208ENST00000459988 DNAJC5Q9H3Z4 198 aa15.74■□□□□ 0.11
UBAP2-208ENST00000459988 DNAJC5BQ9UF47 199 aa15.7■□□□□ 0.1
UBAP2-208ENST00000459988 CCDC180Q9P1Z9 1646 aa15.51■□□□□ 0.07
UBAP2-208ENST00000459988 RB1CC1Q8TDY2 1594 aa15.13■□□□□ 0.01
UBAP2-208ENST00000459988 SHROOM4Q9ULL8 1493 aa14.9□□□□□ -0.02
UBAP2-208ENST00000459988 NACADO15069 1562 aa14.82□□□□□ -0.04
UBAP2-208ENST00000459988 CUX2O14529 1486 aa14.78□□□□□ -0.04
UBAP2-208ENST00000459988 CECR2Q9BXF3 1484 aa14.63□□□□□ -0.07
UBAP2-208ENST00000459988 UNC13AQ9UPW8 1703 aa14.6□□□□□ -0.07
UBAP2-208ENST00000459988 CC2D2AQ9P2K1 1620 aa14.54□□□□□ -0.08
UBAP2-208ENST00000459988 BICRAQ9NZM4 1560 aa14.53□□□□□ -0.08
UBAP2-208ENST00000459988 MYO15BQ96JP2 1530 aa14.49□□□□□ -0.09
UBAP2-208ENST00000459988 EIF4G1Q04637 1599 aaKnown RBP14.27□□□□□ -0.12
UBAP2-208ENST00000459988 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
UBAP2-208ENST00000459988 TRIM41Q8WV44 630 aa14.04□□□□□ -0.16
UBAP2-208ENST00000459988 ERCC6Q03468 1493 aa13.94□□□□□ -0.18
UBAP2-208ENST00000459988 AEBP2Q6ZN18 517 aaPredicted RBP13.83□□□□□ -0.2
UBAP2-208ENST00000459988 THOC2Q8NI27 1593 aaKnown RBP13.8□□□□□ -0.2
UBAP2-208ENST00000459988 DCAF1Q9Y4B6 1507 aa13.75□□□□□ -0.21
UBAP2-208ENST00000459988 CHIC1Q5VXU3 224 aa13.73□□□□□ -0.21
UBAP2-208ENST00000459988 BAZ1AQ9NRL2 1556 aaPredicted RBP13.63□□□□□ -0.23
UBAP2-208ENST00000459988 NCAPD3P42695 1498 aa13.55□□□□□ -0.24
UBAP2-208ENST00000459988 RIMBP3CA6NJZ7 1639 aa13.54□□□□□ -0.24
UBAP2-208ENST00000459988 RIMBP3BA6NNM3 1639 aa13.54□□□□□ -0.24
UBAP2-208ENST00000459988 RIMBP3Q9UFD9 1639 aa13.54□□□□□ -0.24
UBAP2-208ENST00000459988 LAMC3Q9Y6N6 1575 aa13.54□□□□□ -0.24
UBAP2-208ENST00000459988 HMGXB3Q12766 1538 aa13.48□□□□□ -0.25
UBAP2-208ENST00000459988 SCRIBQ14160 1630 aa13.48□□□□□ -0.25
UBAP2-208ENST00000459988 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
UBAP2-208ENST00000459988 WDR62O43379 1518 aa13.4□□□□□ -0.26
UBAP2-208ENST00000459988 ILDR1Q86SU0 546 aaPredicted RBP13.39□□□□□ -0.27
UBAP2-208ENST00000459988 PDS5BQ9NTI5 1447 aa13.35□□□□□ -0.27
UBAP2-208ENST00000459988 ARHGEF11O15085 1522 aa13.34□□□□□ -0.27
UBAP2-208ENST00000459988 KIF21AQ7Z4S6 1674 aa13.31□□□□□ -0.28
UBAP2-208ENST00000459988 SMARCA2P51531 1590 aa13.31□□□□□ -0.28
UBAP2-208ENST00000459988 MRC2Q9UBG0 1479 aa13.31□□□□□ -0.28
UBAP2-208ENST00000459988 DCAF8L2P0C7V8 631 aa13.27□□□□□ -0.29
UBAP2-208ENST00000459988 ZCCHC6Q5VYS8 1495 aaKnown RBP13.22□□□□□ -0.29
UBAP2-208ENST00000459988 NESP48681 1621 aa13.21□□□□□ -0.3
UBAP2-208ENST00000459988 ERCC6L2Q5T890 1561 aa13.19□□□□□ -0.3
UBAP2-208ENST00000459988 RSF1Q96T23 1441 aaPredicted RBP13.18□□□□□ -0.3
UBAP2-208ENST00000459988 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
UBAP2-208ENST00000459988 TRHP20396 242 aaPredicted RBP13.11□□□□□ -0.31
UBAP2-208ENST00000459988 ARAP1Q96P48 1450 aa13.08□□□□□ -0.32
UBAP2-208ENST00000459988 PEG3Q9GZU2 1588 aa13.08□□□□□ -0.32
UBAP2-208ENST00000459988 BAZ1BQ9UIG0 1483 aaKnown RBP12.95□□□□□ -0.34
UBAP2-208ENST00000459988 CEP164Q9UPV0 1460 aa12.93□□□□□ -0.34
UBAP2-208ENST00000459988 SMARCA4P51532 1647 aa12.93□□□□□ -0.34
UBAP2-208ENST00000459988 FBXO41Q8TF61 875 aa12.92□□□□□ -0.34
UBAP2-208ENST00000459988 CADPSQ9ULU8 1353 aa12.91□□□□□ -0.34
UBAP2-208ENST00000459988 CYB5RLQ6IPT4 315 aa12.88□□□□□ -0.35
UBAP2-208ENST00000459988 SOCS7O14512 581 aa12.87□□□□□ -0.35
UBAP2-208ENST00000459988 IFT140Q96RY7 1462 aa12.84□□□□□ -0.35
UBAP2-208ENST00000459988 LMTK3Q96Q04 1460 aa12.84□□□□□ -0.35
UBAP2-208ENST00000459988 CHD1O14646 1710 aa12.79□□□□□ -0.36
UBAP2-208ENST00000459988 WDR97A6NE52 1622 aa12.78□□□□□ -0.36
UBAP2-208ENST00000459988 CLASP1Q7Z460 1538 aa12.78□□□□□ -0.36
UBAP2-208ENST00000459988 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
UBAP2-208ENST00000459988 PRDM2Q13029 1718 aa12.7□□□□□ -0.38
UBAP2-208ENST00000459988 HECW2Q9P2P5 1572 aa12.69□□□□□ -0.38
UBAP2-208ENST00000459988 SYNJ1O43426 1573 aa12.67□□□□□ -0.38
UBAP2-208ENST00000459988 KIF13AQ9H1H9 1805 aa12.67□□□□□ -0.38
UBAP2-208ENST00000459988 EIF4G3O43432 1585 aaKnown RBP12.66□□□□□ -0.38
UBAP2-208ENST00000459988 URB2Q14146 1524 aaKnown RBP12.65□□□□□ -0.38
UBAP2-208ENST00000459988 SLC24A1O60721 1099 aa12.65□□□□□ -0.38
UBAP2-208ENST00000459988 ABCC8Q09428 1581 aa12.65□□□□□ -0.39
UBAP2-208ENST00000459988 KDM4FA0A1W2PPD8 638 aa12.61□□□□□ -0.39
UBAP2-208ENST00000459988 CFTRP13569 1480 aa12.59□□□□□ -0.39
UBAP2-208ENST00000459988 KDM6BO15054 1643 aa12.54□□□□□ -0.4
UBAP2-208ENST00000459988 GAPVD1Q14C86 1478 aa12.52□□□□□ -0.4
UBAP2-208ENST00000459988 ZNF608Q9ULD9 1512 aaPredicted RBP12.51□□□□□ -0.41
UBAP2-208ENST00000459988 TOP2BQ02880 1626 aa12.49□□□□□ -0.41
UBAP2-208ENST00000459988 SPATA31D1Q6ZQQ2 1576 aa12.46□□□□□ -0.41
UBAP2-208ENST00000459988 TARBP1Q13395 1621 aaKnown RBP12.46□□□□□ -0.42
UBAP2-208ENST00000459988 MAGI1Q96QZ7 1491 aaPredicted RBP12.46□□□□□ -0.42
UBAP2-208ENST00000459988 ADGRL1O94910 1474 aa12.45□□□□□ -0.42
UBAP2-208ENST00000459988 MAPKBP1O60336 1514 aa12.45□□□□□ -0.42
UBAP2-208ENST00000459988 SYNJ2O15056 1496 aa12.44□□□□□ -0.42
UBAP2-208ENST00000459988 ABCC10Q5T3U5 1492 aa12.44□□□□□ -0.42
UBAP2-208ENST00000459988 DNMBPQ6XZF7 1577 aa12.39□□□□□ -0.43
UBAP2-208ENST00000459988 DIP2BQ9P265 1576 aa12.37□□□□□ -0.43
UBAP2-208ENST00000459988 TOPBP1Q92547 1522 aa12.37□□□□□ -0.43
UBAP2-208ENST00000459988 DISP3Q9P2K9 1392 aa12.35□□□□□ -0.43
UBAP2-208ENST00000459988 MROH2BQ7Z745 1585 aa12.34□□□□□ -0.43
UBAP2-208ENST00000459988 ILDR2Q71H61 639 aa12.32□□□□□ -0.44
UBAP2-208ENST00000459988 SHROOM2Q13796 1616 aa12.32□□□□□ -0.44
UBAP2-208ENST00000459988 PHF23Q9BUL5 403 aaPredicted RBP12.3□□□□□ -0.44
UBAP2-208ENST00000459988 SNAPC4Q5SXM2 1469 aa12.24□□□□□ -0.45
UBAP2-208ENST00000459988 GLI2P10070 1586 aa12.24□□□□□ -0.45
UBAP2-208ENST00000459988 EHMT2Q96KQ7 1210 aa12.24□□□□□ -0.45
UBAP2-208ENST00000459988 GRIN2BQ13224 1484 aa12.21□□□□□ -0.45
UBAP2-208ENST00000459988 AQRO60306 1485 aaKnown RBP eCLIP12.2□□□□□ -0.462e-10■■■□□ 16.2
UBAP2-208ENST00000459988 IQSEC2Q5JU85 1478 aa12.19□□□□□ -0.46
UBAP2-208ENST00000459988 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
UBAP2-208ENST00000459988 PBRM1Q86U86 1689 aa12.12□□□□□ -0.47
UBAP2-208ENST00000459988 KIAA0586Q9BVV6 1533 aa12.12□□□□□ -0.47
UBAP2-208ENST00000459988 CHMP7Q8WUX9 453 aaPredicted RBP12.12□□□□□ -0.47
UBAP2-208ENST00000459988 POLA1P09884 1462 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms