RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 BBXQ8WY36 941 aaPredicted RBP8.08□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 WDR97A6NE52 1622 aa8.07□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 FGD5Q6ZNL6 1462 aa8.07□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 SAMD1Q6SPF0 538 aaPredicted RBP8.07□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.07□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 DAXXQ9UER7 740 aaPredicted RBP8.07□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 WRNQ14191 1432 aaPredicted RBP eCLIP8.06□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 PKD2Q13563 968 aa8.06□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 ERICH6Q7L0X2 663 aa8.06□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 ARXQ96QS3 562 aa8.06□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 SOGA1O94964 1423 aa8.05□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 ZNF608Q9ULD9 1512 aaPredicted RBP8.05□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 TOP2BQ02880 1626 aa8.05□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 BIVM-ERCC5R4GMW8 1640 aa8.05□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 DNAJC5Q9H3Z4 198 aa8.04□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 EIF4G3O43432 1585 aaKnown RBP8.04□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 RAD54L2Q9Y4B4 1467 aa8.03□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 IFNLR1Q8IU57 520 aaPredicted RBP8.03□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 ABCA10Q8WWZ4 1543 aa8.03□□□□□ -1.12
RNU6ATAC28P-201ENST00000459249 SYNJ1O43426 1573 aa8.02□□□□□ -1.13
RNU6ATAC28P-201ENST00000459249 SPDYE4A6NLX3 237 aa8.02□□□□□ -1.13
RNU6ATAC28P-201ENST00000459249 AQRO60306 1485 aaKnown RBP eCLIP8□□□□□ -1.13
RNU6ATAC28P-201ENST00000459249 ABCA5Q8WWZ7 1642 aa7.99□□□□□ -1.13
RNU6ATAC28P-201ENST00000459249 TDRD9Q8NDG6 1382 aaKnown RBP7.98□□□□□ -1.13
RNU6ATAC28P-201ENST00000459249 FBLN2P98095 1184 aa7.98□□□□□ -1.13
RNU6ATAC28P-201ENST00000459249 GRIN2BQ13224 1484 aa7.98□□□□□ -1.13
RNU6ATAC28P-201ENST00000459249 TIMELESSQ9UNS1 1208 aa7.97□□□□□ -1.13
RNU6ATAC28P-201ENST00000459249 GAPVD1Q14C86 1478 aa7.97□□□□□ -1.13
RNU6ATAC28P-201ENST00000459249 MAGI1Q96QZ7 1491 aaPredicted RBP7.97□□□□□ -1.13
RNU6ATAC28P-201ENST00000459249 SNAPC4Q5SXM2 1469 aa7.95□□□□□ -1.14
RNU6ATAC28P-201ENST00000459249 ZNF219Q9P2Y4 722 aaPredicted RBP7.95□□□□□ -1.14
RNU6ATAC28P-201ENST00000459249 PAXIP1Q6ZW49 1069 aaPredicted RBP7.94□□□□□ -1.14
RNU6ATAC28P-201ENST00000459249 OSCARQ8IYS5 282 aa7.94□□□□□ -1.14
RNU6ATAC28P-201ENST00000459249 ERICH3Q5RHP9 1530 aa7.93□□□□□ -1.14
RNU6ATAC28P-201ENST00000459249 PBRM1Q86U86 1689 aa7.93□□□□□ -1.14
RNU6ATAC28P-201ENST00000459249 GTF3C3Q9Y5Q9 886 aa7.93□□□□□ -1.14
RNU6ATAC28P-201ENST00000459249 SYNJ2O15056 1496 aa7.93□□□□□ -1.14
RNU6ATAC28P-201ENST00000459249 TULP1O00294 542 aaPredicted RBP7.92□□□□□ -1.14
RNU6ATAC28P-201ENST00000459249 CHD1O14646 1710 aa7.91□□□□□ -1.14
RNU6ATAC28P-201ENST00000459249 ADAMTS12P58397 1594 aa7.9□□□□□ -1.14
RNU6ATAC28P-201ENST00000459249 NPM1P06748 294 aaKnown RBP eCLIP7.9□□□□□ -1.14
RNU6ATAC28P-201ENST00000459249 SPRYD3Q8NCJ5 442 aa7.9□□□□□ -1.14
RNU6ATAC28P-201ENST00000459249 FHAD1B1AJZ9 1412 aa7.89□□□□□ -1.15
RNU6ATAC28P-201ENST00000459249 KIF27Q86VH2 1401 aa7.89□□□□□ -1.15
RNU6ATAC28P-201ENST00000459249 CFAP44Q96MT7 982 aa7.89□□□□□ -1.15
RNU6ATAC28P-201ENST00000459249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.88□□□□□ -1.15
RNU6ATAC28P-201ENST00000459249 CLASP1Q7Z460 1538 aa7.88□□□□□ -1.15
RNU6ATAC28P-201ENST00000459249 GRIN2AQ12879 1464 aa7.87□□□□□ -1.15
RNU6ATAC28P-201ENST00000459249 CHMP7Q8WUX9 453 aaPredicted RBP7.87□□□□□ -1.15
RNU6ATAC28P-201ENST00000459249 NUP160Q12769 1436 aa7.86□□□□□ -1.15
RNU6ATAC28P-201ENST00000459249 U3KPZ7 1027 aaPredicted RBP7.86□□□□□ -1.15
RNU6ATAC28P-201ENST00000459249 IGF1RP08069 1367 aa7.85□□□□□ -1.15
RNU6ATAC28P-201ENST00000459249 ECM2O94769 699 aaPredicted RBP7.85□□□□□ -1.15
RNU6ATAC28P-201ENST00000459249 TSHZ2Q9NRE2 1034 aa7.85□□□□□ -1.15
RNU6ATAC28P-201ENST00000459249 CUL7Q14999 1698 aa7.85□□□□□ -1.15
RNU6ATAC28P-201ENST00000459249 SPOCK2Q92563 424 aa7.84□□□□□ -1.15
RNU6ATAC28P-201ENST00000459249 ARHGEF11O15085 1522 aa7.83□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 APLP2Q06481 763 aa7.83□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 MKRN4PQ13434 485 aaPredicted RBP7.83□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 NBR1Q14596 966 aa7.83□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 CEP170Q5SW79 1584 aa7.82□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 TRIM41Q8WV44 630 aa7.82□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 RIMBP3CA6NJZ7 1639 aa7.81□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 RIMBP3BA6NNM3 1639 aa7.81□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 RIMBP3Q9UFD9 1639 aa7.81□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 CARMIL1Q5VZK9 1371 aa7.81□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 TMEM132AQ24JP5 1023 aa7.8□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 SHROOM2Q13796 1616 aa7.79□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 HOMEZQ8IX15 550 aa7.79□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 RUSC2Q8N2Y8 1516 aa7.78□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 ARAP1Q96P48 1450 aa7.78□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 KIAA0586Q9BVV6 1533 aa7.78□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 EEA1Q15075 1411 aa7.78□□□□□ -1.16
RNU6ATAC28P-201ENST00000459249 PRXQ9BXM0 1461 aa7.76□□□□□ -1.17
RNU6ATAC28P-201ENST00000459249 RAPGEF2Q9Y4G8 1499 aa7.76□□□□□ -1.17
RNU6ATAC28P-201ENST00000459249 RGL2O15211 777 aa7.73□□□□□ -1.17
RNU6ATAC28P-201ENST00000459249 KLHL34Q8N239 644 aa7.73□□□□□ -1.17
RNU6ATAC28P-201ENST00000459249 JPH4Q96JJ6 628 aa7.73□□□□□ -1.17
RNU6ATAC28P-201ENST00000459249 PRG4Q92954 1404 aaPredicted RBP7.72□□□□□ -1.17
RNU6ATAC28P-201ENST00000459249 IQGAP2Q13576 1575 aa7.71□□□□□ -1.17
RNU6ATAC28P-201ENST00000459249 ERCC6L2Q5T890 1561 aa7.71□□□□□ -1.17
RNU6ATAC28P-201ENST00000459249 CYB5RLQ6IPT4 315 aa7.71□□□□□ -1.18
RNU6ATAC28P-201ENST00000459249 UGGT2Q9NYU1 1516 aa7.7□□□□□ -1.18
RNU6ATAC28P-201ENST00000459249 STAG3Q9UJ98 1225 aa7.68□□□□□ -1.18
RNU6ATAC28P-201ENST00000459249 CARMIL2Q6F5E8 1435 aa7.68□□□□□ -1.18
RNU6ATAC28P-201ENST00000459249 KIF21BO75037 1637 aa7.67□□□□□ -1.18
RNU6ATAC28P-201ENST00000459249 CTTNBP2Q8WZ74 1663 aa7.67□□□□□ -1.18
RNU6ATAC28P-201ENST00000459249 DCAF8L1A6NGE4 600 aa7.66□□□□□ -1.18
RNU6ATAC28P-201ENST00000459249 CHGAP10645 457 aaKnown RBP7.66□□□□□ -1.18
RNU6ATAC28P-201ENST00000459249 DISP1Q96F81 1524 aa7.66□□□□□ -1.18
RNU6ATAC28P-201ENST00000459249 GOLGA3Q08378 1498 aa7.65□□□□□ -1.18
RNU6ATAC28P-201ENST00000459249 TNIKQ9UKE5 1360 aa7.65□□□□□ -1.18
RNU6ATAC28P-201ENST00000459249 KIAA0556O60303 1618 aa7.64□□□□□ -1.19
RNU6ATAC28P-201ENST00000459249 C14orf37Q86TY3 774 aa7.64□□□□□ -1.19
RNU6ATAC28P-201ENST00000459249 PTPRGP23470 1445 aa7.63□□□□□ -1.19
RNU6ATAC28P-201ENST00000459249 HS6ST3Q8IZP7 471 aa7.63□□□□□ -1.19
RNU6ATAC28P-201ENST00000459249 UHRF1BP1LA0JNW5 1464 aa7.62□□□□□ -1.19
RNU6ATAC28P-201ENST00000459249 ADCY10Q96PN6 1610 aa7.61□□□□□ -1.19
RNU6ATAC28P-201ENST00000459249 SAMD9Q5K651 1589 aa7.6□□□□□ -1.19
RNU6ATAC28P-201ENST00000459249 FAM9AQ8IZU1 332 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms