RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 CHIC2Q9UKJ5 165 aa14.57□□□□□ -0.08
AMBRA1-202ENST00000458649 WIZO95785 1651 aa14.57□□□□□ -0.08
AMBRA1-202ENST00000458649 TOP2AP11388 1531 aaKnown RBP14.55□□□□□ -0.08
AMBRA1-202ENST00000458649 TRHP20396 242 aaPredicted RBP14.55□□□□□ -0.08
AMBRA1-202ENST00000458649 C14orf37Q86TY3 774 aa14.54□□□□□ -0.08
AMBRA1-202ENST00000458649 ABCC8Q09428 1581 aa14.53□□□□□ -0.08
AMBRA1-202ENST00000458649 ANP32AP39687 249 aaKnown RBP14.51□□□□□ -0.09
AMBRA1-202ENST00000458649 SCAF1Q9H7N4 1312 aaKnown RBP14.49□□□□□ -0.09
AMBRA1-202ENST00000458649 CUX2O14529 1486 aa14.49□□□□□ -0.09
AMBRA1-202ENST00000458649 CFDP1Q9UEE9 299 aaPredicted RBP14.48□□□□□ -0.09
AMBRA1-202ENST00000458649 CARMIL1Q5VZK9 1371 aa14.48□□□□□ -0.09
AMBRA1-202ENST00000458649 NPM2Q86SE8 214 aaKnown RBP14.48□□□□□ -0.09
AMBRA1-202ENST00000458649 DDX10Q13206 875 aaKnown RBP14.45□□□□□ -0.1
AMBRA1-202ENST00000458649 SMARCA4P51532 1647 aa14.45□□□□□ -0.1
AMBRA1-202ENST00000458649 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
AMBRA1-202ENST00000458649 HAP1P54257 671 aaPredicted RBP14.43□□□□□ -0.1
AMBRA1-202ENST00000458649 CARMIL2Q6F5E8 1435 aa14.42□□□□□ -0.1
AMBRA1-202ENST00000458649 RRP7BPQ9NSQ0 103 aa14.42□□□□□ -0.1
AMBRA1-202ENST00000458649 HDGFP51858 240 aaKnown RBP14.42□□□□□ -0.1
AMBRA1-202ENST00000458649 FHAD1B1AJZ9 1412 aa14.4□□□□□ -0.1
AMBRA1-202ENST00000458649 VPS8Q8N3P4 1428 aa14.38□□□□□ -0.11
AMBRA1-202ENST00000458649 CDCA8Q53HL2 280 aa14.36□□□□□ -0.11
AMBRA1-202ENST00000458649 KDM2AQ9Y2K7 1162 aa14.36□□□□□ -0.11
AMBRA1-202ENST00000458649 KANK1Q14678 1352 aa14.35□□□□□ -0.11
AMBRA1-202ENST00000458649 CADPSQ9ULU8 1353 aa14.35□□□□□ -0.11
AMBRA1-202ENST00000458649 A0A0G2JS52 829 aa14.34□□□□□ -0.11
AMBRA1-202ENST00000458649 ANP32BQ92688 251 aaKnown RBP14.34□□□□□ -0.11
AMBRA1-202ENST00000458649 CCNB3Q8WWL7 1395 aa14.33□□□□□ -0.11
AMBRA1-202ENST00000458649 WDR43Q15061 677 aaKnown RBP eCLIP14.33□□□□□ -0.12
AMBRA1-202ENST00000458649 EIF4G1Q04637 1599 aaKnown RBP14.32□□□□□ -0.12
AMBRA1-202ENST00000458649 ANP32EQ9BTT0 268 aa14.32□□□□□ -0.12
AMBRA1-202ENST00000458649 BCL11AQ9H165 835 aa14.32□□□□□ -0.12
AMBRA1-202ENST00000458649 MIER1Q8N108 512 aa14.31□□□□□ -0.12
AMBRA1-202ENST00000458649 EIF4G2P78344 907 aaKnown RBP eCLIP14.29□□□□□ -0.126e-7■■■□□ 18.8
AMBRA1-202ENST00000458649 HNRNPUQ00839 825 aaKnown RBP eCLIP14.29□□□□□ -0.12
AMBRA1-202ENST00000458649 HIRIP3Q9BW71 556 aaPredicted RBP14.28□□□□□ -0.12
AMBRA1-202ENST00000458649 ZBTB7CA1YPR0 619 aa14.28□□□□□ -0.12
AMBRA1-202ENST00000458649 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.27□□□□□ -0.12
AMBRA1-202ENST00000458649 TMC1Q8TDI8 760 aa14.27□□□□□ -0.12
AMBRA1-202ENST00000458649 TDRD9Q8NDG6 1382 aaKnown RBP14.27□□□□□ -0.13
AMBRA1-202ENST00000458649 FAM9BQ8IZU0 186 aa14.25□□□□□ -0.13
AMBRA1-202ENST00000458649 KANK4Q5T7N3 995 aaPredicted RBP14.25□□□□□ -0.13
AMBRA1-202ENST00000458649 CFAP53Q96M91 514 aa14.24□□□□□ -0.13
AMBRA1-202ENST00000458649 NBR1Q14596 966 aa14.24□□□□□ -0.13
AMBRA1-202ENST00000458649 POGKQ9P215 609 aa14.24□□□□□ -0.13
AMBRA1-202ENST00000458649 RAPGEF2Q9Y4G8 1499 aa14.21□□□□□ -0.14
AMBRA1-202ENST00000458649 FKBP8Q14318 412 aa14.21□□□□□ -0.14
AMBRA1-202ENST00000458649 RGL3Q3MIN7 710 aa14.21□□□□□ -0.14
AMBRA1-202ENST00000458649 SIN3AQ96ST3 1273 aa14.21□□□□□ -0.14
AMBRA1-202ENST00000458649 EFCAB2Q5VUJ9 269 aa14.2□□□□□ -0.14
AMBRA1-202ENST00000458649 RUSC2Q8N2Y8 1516 aa14.2□□□□□ -0.14
AMBRA1-202ENST00000458649 TNNT2P45379 298 aaPredicted RBP14.2□□□□□ -0.14
AMBRA1-202ENST00000458649 MRS2Q9HD23 443 aa14.19□□□□□ -0.14
AMBRA1-202ENST00000458649 FMN1Q68DA7 1419 aa14.19□□□□□ -0.14
AMBRA1-202ENST00000458649 MLECQ14165 292 aa14.18□□□□□ -0.14
AMBRA1-202ENST00000458649 ARHGAP35Q9NRY4 1499 aa14.17□□□□□ -0.14
AMBRA1-202ENST00000458649 MYH16Q9H6N6 1097 aa14.16□□□□□ -0.14
AMBRA1-202ENST00000458649 LMOD2Q6P5Q4 547 aa14.16□□□□□ -0.14
AMBRA1-202ENST00000458649 UPF2Q9HAU5 1272 aaKnown RBP14.16□□□□□ -0.14
AMBRA1-202ENST00000458649 SETD5Q9C0A6 1442 aa14.15□□□□□ -0.14
AMBRA1-202ENST00000458649 PLEKHG5O94827 1062 aa14.15□□□□□ -0.14
AMBRA1-202ENST00000458649 TIMELESSQ9UNS1 1208 aa14.15□□□□□ -0.14
AMBRA1-202ENST00000458649 FANCD2Q9BXW9 1451 aa14.14□□□□□ -0.15
AMBRA1-202ENST00000458649 NCAPD3P42695 1498 aa14.13□□□□□ -0.15
AMBRA1-202ENST00000458649 KNSTRNQ9Y448 316 aa14.13□□□□□ -0.15
AMBRA1-202ENST00000458649 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
AMBRA1-202ENST00000458649 SENP3Q9H4L4 574 aaPredicted RBP14.12□□□□□ -0.15
AMBRA1-202ENST00000458649 NUDCQ9Y266 331 aa14.11□□□□□ -0.15
AMBRA1-202ENST00000458649 SALL2Q9Y467 1007 aaPredicted RBP14.1□□□□□ -0.15
AMBRA1-202ENST00000458649 CARD11Q9BXL7 1154 aa14.1□□□□□ -0.15
AMBRA1-202ENST00000458649 GGT6Q6P531 493 aa14.09□□□□□ -0.15
AMBRA1-202ENST00000458649 RSPH4AQ5TD94 716 aa14.09□□□□□ -0.15
AMBRA1-202ENST00000458649 FHOD3Q2V2M9 1422 aa14.09□□□□□ -0.15
AMBRA1-202ENST00000458649 ERICH6BQ5W0A0 696 aa14.08□□□□□ -0.16
AMBRA1-202ENST00000458649 PNNQ9H307 717 aaKnown RBP14.07□□□□□ -0.16
AMBRA1-202ENST00000458649 HSP90AA1P07900 732 aaKnown RBP14.07□□□□□ -0.16
AMBRA1-202ENST00000458649 RAB3GAP2Q9H2M9 1393 aa14.06□□□□□ -0.16
AMBRA1-202ENST00000458649 MAPK8IP3Q9UPT6 1336 aa14.05□□□□□ -0.16
AMBRA1-202ENST00000458649 EID1Q9Y6B2 187 aa14.05□□□□□ -0.16
AMBRA1-202ENST00000458649 NPHP1O15259 732 aa14.04□□□□□ -0.16
AMBRA1-202ENST00000458649 JPH4Q96JJ6 628 aa14.03□□□□□ -0.16
AMBRA1-202ENST00000458649 PPM1GO15355 546 aaPredicted RBP14.03□□□□□ -0.16
AMBRA1-202ENST00000458649 IGF1RP08069 1367 aa14.03□□□□□ -0.16
AMBRA1-202ENST00000458649 ARXQ96QS3 562 aa14.02□□□□□ -0.16
AMBRA1-202ENST00000458649 FGD5Q6ZNL6 1462 aa14.02□□□□□ -0.17
AMBRA1-202ENST00000458649 CDK11BP21127 795 aaKnown RBP14.02□□□□□ -0.17
AMBRA1-202ENST00000458649 ANKRD30AQ9BXX3 1397 aa14□□□□□ -0.17
AMBRA1-202ENST00000458649 TMF1P82094 1093 aa13.99□□□□□ -0.17
AMBRA1-202ENST00000458649 CCDC136Q96JN2 1154 aa13.99□□□□□ -0.17
AMBRA1-202ENST00000458649 SPAG9O60271 1321 aaKnown RBP13.98□□□□□ -0.17
AMBRA1-202ENST00000458649 CCDC18Q5T9S5 1454 aa13.97□□□□□ -0.17
AMBRA1-202ENST00000458649 SRPK2P78362 688 aaKnown RBP13.97□□□□□ -0.17
AMBRA1-202ENST00000458649 AEBP2Q6ZN18 517 aaPredicted RBP13.97□□□□□ -0.17
AMBRA1-202ENST00000458649 TRIM44Q96DX7 344 aaPredicted RBP13.96□□□□□ -0.17
AMBRA1-202ENST00000458649 DCAF11Q8TEB1 546 aa13.96□□□□□ -0.17
AMBRA1-202ENST00000458649 CHMP4BQ9H444 224 aaKnown RBP13.96□□□□□ -0.17
AMBRA1-202ENST00000458649 PKD2Q13563 968 aa13.96□□□□□ -0.17
AMBRA1-202ENST00000458649 CYB5RLQ6IPT4 315 aa13.96□□□□□ -0.17
AMBRA1-202ENST00000458649 MPHOSPH9Q99550 1183 aa13.96□□□□□ -0.18
AMBRA1-202ENST00000458649 RTN4Q9NQC3 1192 aaKnown RBP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms