RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 TIAM1Q13009 1591 aa20.5■□□□□ 0.87
SCFD1-203ENST00000458591 MAPKBP1O60336 1514 aa20.48■□□□□ 0.87
SCFD1-203ENST00000458591 LRRC9Q6ZRR7 1453 aa20.46■□□□□ 0.87
SCFD1-203ENST00000458591 RAD54L2Q9Y4B4 1467 aa20.45■□□□□ 0.86
SCFD1-203ENST00000458591 SETD5Q9C0A6 1442 aa20.43■□□□□ 0.86
SCFD1-203ENST00000458591 FHOD3Q2V2M9 1422 aa20.42■□□□□ 0.86
SCFD1-203ENST00000458591 HIRIP3Q9BW71 556 aaPredicted RBP20.42■□□□□ 0.86
SCFD1-203ENST00000458591 SUPT16HQ9Y5B9 1047 aaKnown RBP20.41■□□□□ 0.86
SCFD1-203ENST00000458591 PRDM2Q13029 1718 aa20.39■□□□□ 0.85
SCFD1-203ENST00000458591 FANCD2Q9BXW9 1451 aa20.38■□□□□ 0.85
SCFD1-203ENST00000458591 PCF11O94913 1555 aaKnown RBP20.37■□□□□ 0.85
SCFD1-203ENST00000458591 DDX10Q13206 875 aaKnown RBP20.37■□□□□ 0.85
SCFD1-203ENST00000458591 MAP3K1Q13233 1512 aa20.35■□□□□ 0.85
SCFD1-203ENST00000458591 NESP48681 1621 aa20.34■□□□□ 0.85
SCFD1-203ENST00000458591 WDR97A6NE52 1622 aa20.34■□□□□ 0.85
SCFD1-203ENST00000458591 CC2D2AQ9P2K1 1620 aa20.33■□□□□ 0.85
SCFD1-203ENST00000458591 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
SCFD1-203ENST00000458591 POLA1P09884 1462 aaPredicted RBP20.28■□□□□ 0.84
SCFD1-203ENST00000458591 TOPBP1Q92547 1522 aa20.25■□□□□ 0.83
SCFD1-203ENST00000458591 CFAP43Q8NDM7 1665 aa20.24■□□□□ 0.83
SCFD1-203ENST00000458591 ABCA10Q8WWZ4 1543 aa20.22■□□□□ 0.83
SCFD1-203ENST00000458591 PPP1R15AO75807 674 aaPredicted RBP20.21■□□□□ 0.83
SCFD1-203ENST00000458591 TDRD9Q8NDG6 1382 aaKnown RBP20.21■□□□□ 0.83
SCFD1-203ENST00000458591 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
SCFD1-203ENST00000458591 BCANQ96GW7 911 aa20.2■□□□□ 0.82
SCFD1-203ENST00000458591 CASKIN1Q8WXD9 1431 aa20.2■□□□□ 0.82
SCFD1-203ENST00000458591 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
SCFD1-203ENST00000458591 PTPRKQ15262 1439 aa20.18■□□□□ 0.82
SCFD1-203ENST00000458591 FYCO1Q9BQS8 1478 aa20.18■□□□□ 0.82
SCFD1-203ENST00000458591 FGD6Q6ZV73 1430 aa20.14■□□□□ 0.81
SCFD1-203ENST00000458591 MTUS2Q5JR59 1369 aa20.13■□□□□ 0.81
SCFD1-203ENST00000458591 URB2Q14146 1524 aaKnown RBP20.11■□□□□ 0.81
SCFD1-203ENST00000458591 TRIM52Q96A61 297 aa20.1■□□□□ 0.81
SCFD1-203ENST00000458591 TSHZ2Q9NRE2 1034 aa20.1■□□□□ 0.81
SCFD1-203ENST00000458591 EFCAB5A4FU69 1503 aa20.1■□□□□ 0.81
SCFD1-203ENST00000458591 SNAPC4Q5SXM2 1469 aa20.1■□□□□ 0.81
SCFD1-203ENST00000458591 AQRO60306 1485 aaKnown RBP eCLIP20.08■□□□□ 0.812e-9■■■■■ 39.4
SCFD1-203ENST00000458591 FMN1Q68DA7 1419 aa20.07■□□□□ 0.8
SCFD1-203ENST00000458591 FKBP8Q14318 412 aa20.07■□□□□ 0.8
SCFD1-203ENST00000458591 CCDC18Q5T9S5 1454 aa20.07■□□□□ 0.8
SCFD1-203ENST00000458591 CHIC2Q9UKJ5 165 aa20.07■□□□□ 0.8
SCFD1-203ENST00000458591 ARID3CA6NKF2 412 aa20.06■□□□□ 0.8
SCFD1-203ENST00000458591 TIMELESSQ9UNS1 1208 aa20.06■□□□□ 0.8
SCFD1-203ENST00000458591 TONSLQ96HA7 1378 aa20.06■□□□□ 0.8
SCFD1-203ENST00000458591 CTTNBP2Q8WZ74 1663 aa20.05■□□□□ 0.8
SCFD1-203ENST00000458591 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.05■□□□□ 0.8
SCFD1-203ENST00000458591 RRP7BPQ9NSQ0 103 aa20.05■□□□□ 0.8
SCFD1-203ENST00000458591 CUL7Q14999 1698 aa20.04■□□□□ 0.8
SCFD1-203ENST00000458591 NCOA2Q15596 1464 aa20.02■□□□□ 0.8
SCFD1-203ENST00000458591 ANP32CO43423 234 aa20.02■□□□□ 0.8
SCFD1-203ENST00000458591 LRRIQ1Q96JM4 1722 aa20.02■□□□□ 0.8
SCFD1-203ENST00000458591 NAIPQ13075 1403 aa20■□□□□ 0.79
SCFD1-203ENST00000458591 GAPVD1Q14C86 1478 aa20■□□□□ 0.79
SCFD1-203ENST00000458591 HFM1A2PYH4 1435 aa20■□□□□ 0.79
SCFD1-203ENST00000458591 PTPN23Q9H3S7 1636 aa19.98■□□□□ 0.79
SCFD1-203ENST00000458591 UACAQ9BZF9 1416 aa19.98■□□□□ 0.79
SCFD1-203ENST00000458591 GRIN2BQ13224 1484 aa19.97■□□□□ 0.79
SCFD1-203ENST00000458591 MYOM3Q5VTT5 1437 aa19.97■□□□□ 0.79
SCFD1-203ENST00000458591 MAGI3Q5TCQ9 1506 aa19.96■□□□□ 0.79
SCFD1-203ENST00000458591 SAMD9Q5K651 1589 aa19.95■□□□□ 0.78
SCFD1-203ENST00000458591 CCER2I3L3R5 266 aa19.93■□□□□ 0.78
SCFD1-203ENST00000458591 ABCA5Q8WWZ7 1642 aa19.93■□□□□ 0.78
SCFD1-203ENST00000458591 FOXD1Q16676 465 aa19.93■□□□□ 0.78
SCFD1-203ENST00000458591 KDM5BQ9UGL1 1544 aa19.89■□□□□ 0.77
SCFD1-203ENST00000458591 LAMC3Q9Y6N6 1575 aa19.87■□□□□ 0.77
SCFD1-203ENST00000458591 DENND4BO75064 1496 aaPredicted RBP19.87■□□□□ 0.77
SCFD1-203ENST00000458591 HSPA5P11021 654 aaKnown RBP19.86■□□□□ 0.77
SCFD1-203ENST00000458591 UGGT2Q9NYU1 1516 aa19.85■□□□□ 0.77
SCFD1-203ENST00000458591 SUPT6HQ7KZ85 1726 aaKnown RBP19.85■□□□□ 0.77
SCFD1-203ENST00000458591 KDM6BO15054 1643 aa19.85■□□□□ 0.77
SCFD1-203ENST00000458591 EHBP1L1Q8N3D4 1523 aa19.84■□□□□ 0.77
SCFD1-203ENST00000458591 WASHC2AQ641Q2 1341 aa19.84■□□□□ 0.77
SCFD1-203ENST00000458591 PDS5BQ9NTI5 1447 aa19.83■□□□□ 0.77
SCFD1-203ENST00000458591 CDK13Q14004 1512 aaKnown RBP19.83■□□□□ 0.76
SCFD1-203ENST00000458591 NEFLP07196 543 aa19.81■□□□□ 0.76
SCFD1-203ENST00000458591 IRX6P78412 446 aaPredicted RBP19.8■□□□□ 0.76
SCFD1-203ENST00000458591 CCDC184Q52MB2 194 aa19.8■□□□□ 0.76
SCFD1-203ENST00000458591 MPHOSPH9Q99550 1183 aa19.8■□□□□ 0.76
SCFD1-203ENST00000458591 KIF21AQ7Z4S6 1674 aa19.8■□□□□ 0.76
SCFD1-203ENST00000458591 ARHGEF11O15085 1522 aa19.8■□□□□ 0.76
SCFD1-203ENST00000458591 HNRNPUQ00839 825 aaKnown RBP eCLIP19.79■□□□□ 0.76
SCFD1-203ENST00000458591 C11orf95C9JLR9 678 aaPredicted RBP19.79■□□□□ 0.76
SCFD1-203ENST00000458591 L3MBTL2Q969R5 705 aa19.78■□□□□ 0.76
SCFD1-203ENST00000458591 ZNF644Q9H582 1327 aaPredicted RBP19.77■□□□□ 0.76
SCFD1-203ENST00000458591 TARBP1Q13395 1621 aaKnown RBP19.77■□□□□ 0.76
SCFD1-203ENST00000458591 EPRSP07814 1512 aaKnown RBP19.77■□□□□ 0.75
SCFD1-203ENST00000458591 THOC2Q8NI27 1593 aaKnown RBP19.75■□□□□ 0.75
SCFD1-203ENST00000458591 TCOF1Q13428 1488 aaKnown RBP19.74■□□□□ 0.75
SCFD1-203ENST00000458591 EIF4G2P78344 907 aaKnown RBP eCLIP19.71■□□□□ 0.75
SCFD1-203ENST00000458591 NBPF8Q3BBV2 869 aa19.71■□□□□ 0.75
SCFD1-203ENST00000458591 RBM19Q9Y4C8 960 aaKnown RBP19.7■□□□□ 0.74
SCFD1-203ENST00000458591 HECW1Q76N89 1606 aa19.69■□□□□ 0.74
SCFD1-203ENST00000458591 IQGAP2Q13576 1575 aa19.69■□□□□ 0.74
SCFD1-203ENST00000458591 CNGB1Q14028 1251 aaPredicted RBP19.66■□□□□ 0.74
SCFD1-203ENST00000458591 ANP32EQ9BTT0 268 aa19.66■□□□□ 0.74
SCFD1-203ENST00000458591 ZNF608Q9ULD9 1512 aaPredicted RBP19.65■□□□□ 0.74
SCFD1-203ENST00000458591 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
SCFD1-203ENST00000458591 GCC2Q8IWJ2 1684 aa19.65■□□□□ 0.74
SCFD1-203ENST00000458591 FAM9BQ8IZU0 186 aa19.64■□□□□ 0.74
SCFD1-203ENST00000458591 WDR62O43379 1518 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms