RNA–Protein interactions for RNA: ENST00000458578.6

UBE2L3-202, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-202ENST00000458578 RRBP1Q9P2E9 1410 aaKnown RBP16.42■□□□□ 0.22
UBE2L3-202ENST00000458578 ARHGAP35Q9NRY4 1499 aa16.41■□□□□ 0.22
UBE2L3-202ENST00000458578 NCAPD3P42695 1498 aa16.41■□□□□ 0.22
UBE2L3-202ENST00000458578 CUX2O14529 1486 aa16.4■□□□□ 0.22
UBE2L3-202ENST00000458578 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
UBE2L3-202ENST00000458578 IGF1RP08069 1367 aa16.36■□□□□ 0.21
UBE2L3-202ENST00000458578 CFTRP13569 1480 aa16.36■□□□□ 0.21
UBE2L3-202ENST00000458578 ANP32CO43423 234 aa16.35■□□□□ 0.21
UBE2L3-202ENST00000458578 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
UBE2L3-202ENST00000458578 CARMIL1Q5VZK9 1371 aa16.33■□□□□ 0.2
UBE2L3-202ENST00000458578 MAPKBP1O60336 1514 aa16.32■□□□□ 0.2
UBE2L3-202ENST00000458578 HMGXB3Q12766 1538 aa16.32■□□□□ 0.2
UBE2L3-202ENST00000458578 PPP1R15AO75807 674 aaPredicted RBP16.31■□□□□ 0.2
UBE2L3-202ENST00000458578 SETD5Q9C0A6 1442 aa16.29■□□□□ 0.2
UBE2L3-202ENST00000458578 PHLDB1Q86UU1 1377 aa16.27■□□□□ 0.19
UBE2L3-202ENST00000458578 FGD5Q6ZNL6 1462 aa16.24■□□□□ 0.19
UBE2L3-202ENST00000458578 MSH5O43196 834 aa16.24■□□□□ 0.19
UBE2L3-202ENST00000458578 HNRNPUQ00839 825 aaKnown RBP eCLIP16.24■□□□□ 0.19
UBE2L3-202ENST00000458578 CADPSQ9ULU8 1353 aa16.24■□□□□ 0.19
UBE2L3-202ENST00000458578 ERICH6Q7L0X2 663 aa16.22■□□□□ 0.19
UBE2L3-202ENST00000458578 FHOD3Q2V2M9 1422 aa16.2■□□□□ 0.18
UBE2L3-202ENST00000458578 CCER2I3L3R5 266 aa16.19■□□□□ 0.18
UBE2L3-202ENST00000458578 LRRC9Q6ZRR7 1453 aa16.19■□□□□ 0.18
UBE2L3-202ENST00000458578 TIAM1Q13009 1591 aa16.19■□□□□ 0.18
UBE2L3-202ENST00000458578 RAD54L2Q9Y4B4 1467 aa16.17■□□□□ 0.18
UBE2L3-202ENST00000458578 TONSLQ96HA7 1378 aa16.16■□□□□ 0.18
UBE2L3-202ENST00000458578 CDK11AQ9UQ88 783 aaPredicted RBP16.16■□□□□ 0.18
UBE2L3-202ENST00000458578 FHAD1B1AJZ9 1412 aa16.11■□□□□ 0.17
UBE2L3-202ENST00000458578 FANCD2Q9BXW9 1451 aa16.1■□□□□ 0.17
UBE2L3-202ENST00000458578 PCF11O94913 1555 aaKnown RBP16.09■□□□□ 0.17
UBE2L3-202ENST00000458578 CNGB1Q14028 1251 aaPredicted RBP16.08■□□□□ 0.17
UBE2L3-202ENST00000458578 ARID3CA6NKF2 412 aa16.07■□□□□ 0.16
UBE2L3-202ENST00000458578 TIMELESSQ9UNS1 1208 aa16.07■□□□□ 0.16
UBE2L3-202ENST00000458578 NESP48681 1621 aa16.07■□□□□ 0.16
UBE2L3-202ENST00000458578 FAM9BQ8IZU0 186 aa16.05■□□□□ 0.16
UBE2L3-202ENST00000458578 MTUS2Q5JR59 1369 aa16.04■□□□□ 0.16
UBE2L3-202ENST00000458578 CHIC2Q9UKJ5 165 aa16.04■□□□□ 0.16
UBE2L3-202ENST00000458578 B4GALNT3Q6L9W6 998 aa16.03■□□□□ 0.16
UBE2L3-202ENST00000458578 TDRD9Q8NDG6 1382 aaKnown RBP16.03■□□□□ 0.16
UBE2L3-202ENST00000458578 CCDC184Q52MB2 194 aa16.03■□□□□ 0.16
UBE2L3-202ENST00000458578 MAP3K1Q13233 1512 aa16.02■□□□□ 0.16
UBE2L3-202ENST00000458578 CC2D2AQ9P2K1 1620 aa16.01■□□□□ 0.15
UBE2L3-202ENST00000458578 POLA1P09884 1462 aaPredicted RBP16■□□□□ 0.15
UBE2L3-202ENST00000458578 PRDM2Q13029 1718 aa16■□□□□ 0.15
UBE2L3-202ENST00000458578 FANCIQ9NVI1 1328 aa16■□□□□ 0.15
UBE2L3-202ENST00000458578 SENP3-EIF4A1A0A087X0R7 540 aa16■□□□□ 0.15
UBE2L3-202ENST00000458578 RRP7BPQ9NSQ0 103 aa16■□□□□ 0.15
UBE2L3-202ENST00000458578 HSPA5P11021 654 aaKnown RBP15.98■□□□□ 0.15
UBE2L3-202ENST00000458578 NBR1Q14596 966 aa15.97■□□□□ 0.15
UBE2L3-202ENST00000458578 WASHC2AQ641Q2 1341 aa15.96■□□□□ 0.15
UBE2L3-202ENST00000458578 TOPBP1Q92547 1522 aa15.96■□□□□ 0.15
UBE2L3-202ENST00000458578 CCDC18Q5T9S5 1454 aa15.96■□□□□ 0.15
UBE2L3-202ENST00000458578 CASKIN1Q8WXD9 1431 aa15.96■□□□□ 0.15
UBE2L3-202ENST00000458578 DNAJC5BQ9UF47 199 aa15.95■□□□□ 0.14
UBE2L3-202ENST00000458578 FGD6Q6ZV73 1430 aa15.95■□□□□ 0.14
UBE2L3-202ENST00000458578 PPP4R2Q9NY27 417 aa15.95■□□□□ 0.14
UBE2L3-202ENST00000458578 PTPRKQ15262 1439 aa15.95■□□□□ 0.14
UBE2L3-202ENST00000458578 FYCO1Q9BQS8 1478 aa15.94■□□□□ 0.14
UBE2L3-202ENST00000458578 MRS2Q9HD23 443 aa15.94■□□□□ 0.14
UBE2L3-202ENST00000458578 CFAP43Q8NDM7 1665 aa15.93■□□□□ 0.14
UBE2L3-202ENST00000458578 ABCA10Q8WWZ4 1543 aa15.92■□□□□ 0.14
UBE2L3-202ENST00000458578 FOXD1Q16676 465 aa15.92■□□□□ 0.14
UBE2L3-202ENST00000458578 FMN1Q68DA7 1419 aa15.91■□□□□ 0.14
UBE2L3-202ENST00000458578 DEKP35659 375 aaKnown RBP15.91■□□□□ 0.14
UBE2L3-202ENST00000458578 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
UBE2L3-202ENST00000458578 POLR3GLQ9BT43 218 aa15.9■□□□□ 0.14
UBE2L3-202ENST00000458578 EIF4G2P78344 907 aaKnown RBP eCLIP15.89■□□□□ 0.134e-8■■■□□ 19.2
UBE2L3-202ENST00000458578 AQRO60306 1485 aaKnown RBP eCLIP15.89■□□□□ 0.134e-7■■■■■ 32.3
UBE2L3-202ENST00000458578 UACAQ9BZF9 1416 aa15.88■□□□□ 0.13
UBE2L3-202ENST00000458578 C11orf95C9JLR9 678 aaPredicted RBP15.87■□□□□ 0.13
UBE2L3-202ENST00000458578 EFCAB5A4FU69 1503 aa15.86■□□□□ 0.13
UBE2L3-202ENST00000458578 NCOA2Q15596 1464 aa15.86■□□□□ 0.13
UBE2L3-202ENST00000458578 PAK3O75914 559 aaPredicted RBP15.84■□□□□ 0.13
UBE2L3-202ENST00000458578 PRKRIP1Q9H875 184 aaPredicted RBP15.84■□□□□ 0.13
UBE2L3-202ENST00000458578 SNAPC4Q5SXM2 1469 aa15.83■□□□□ 0.13
UBE2L3-202ENST00000458578 NAIPQ13075 1403 aa15.83■□□□□ 0.12
UBE2L3-202ENST00000458578 URB2Q14146 1524 aaKnown RBP15.83■□□□□ 0.12
UBE2L3-202ENST00000458578 HFM1A2PYH4 1435 aa15.83■□□□□ 0.12
UBE2L3-202ENST00000458578 L3MBTL2Q969R5 705 aa15.82■□□□□ 0.12
UBE2L3-202ENST00000458578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.82■□□□□ 0.122e-7■□□□□ 9.7
UBE2L3-202ENST00000458578 MYOM3Q5VTT5 1437 aa15.82■□□□□ 0.12
UBE2L3-202ENST00000458578 GAPVD1Q14C86 1478 aa15.82■□□□□ 0.12
UBE2L3-202ENST00000458578 NOP58Q9Y2X3 529 aaKnown RBP15.81■□□□□ 0.12
UBE2L3-202ENST00000458578 CTTNBP2Q8WZ74 1663 aa15.8■□□□□ 0.12
UBE2L3-202ENST00000458578 PTPN23Q9H3S7 1636 aa15.79■□□□□ 0.12
UBE2L3-202ENST00000458578 CUL7Q14999 1698 aa15.79■□□□□ 0.12
UBE2L3-202ENST00000458578 ERICH6BQ5W0A0 696 aa15.78■□□□□ 0.12
UBE2L3-202ENST00000458578 CNTLNQ9NXG0 1405 aa15.78■□□□□ 0.12
UBE2L3-202ENST00000458578 ZNF326Q5BKZ1 582 aaKnown RBP15.76■□□□□ 0.11
UBE2L3-202ENST00000458578 CCDC136Q96JN2 1154 aa15.76■□□□□ 0.11
UBE2L3-202ENST00000458578 ZBED9Q6R2W3 1325 aa15.76■□□□□ 0.11
UBE2L3-202ENST00000458578 MPHOSPH9Q99550 1183 aa15.76■□□□□ 0.11
UBE2L3-202ENST00000458578 AKNAQ7Z591 1439 aa15.75■□□□□ 0.11
UBE2L3-202ENST00000458578 LRRIQ1Q96JM4 1722 aa15.74■□□□□ 0.11
UBE2L3-202ENST00000458578 KDM5BQ9UGL1 1544 aa15.74■□□□□ 0.11
UBE2L3-202ENST00000458578 GRIN2BQ13224 1484 aa15.74■□□□□ 0.11
UBE2L3-202ENST00000458578 CCDC7Q96M83 1385 aa15.74■□□□□ 0.11
UBE2L3-202ENST00000458578 NBPF8Q3BBV2 869 aa15.73■□□□□ 0.11
UBE2L3-202ENST00000458578 MAGI3Q5TCQ9 1506 aa15.72■□□□□ 0.11
UBE2L3-202ENST00000458578 NPM2Q86SE8 214 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms