RNA–Protein interactions for RNA: ENST00000456433.5

PMPCB-206, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-206ENST00000456433 SHROOM2Q13796 1616 aa28.32■■■□□ 2.12
PMPCB-206ENST00000456433 ARHGEF11O15085 1522 aa28.26■■■□□ 2.11
PMPCB-206ENST00000456433 CTTNBP2Q8WZ74 1663 aa28.24■■■□□ 2.11
PMPCB-206ENST00000456433 IQGAP2Q13576 1575 aa28.23■■■□□ 2.11
PMPCB-206ENST00000456433 RIMBP3CA6NJZ7 1639 aa28.21■■■□□ 2.11
PMPCB-206ENST00000456433 RIMBP3BA6NNM3 1639 aa28.21■■■□□ 2.11
PMPCB-206ENST00000456433 RIMBP3Q9UFD9 1639 aa28.21■■■□□ 2.11
PMPCB-206ENST00000456433 JPH4Q96JJ6 628 aa28.18■■■□□ 2.1
PMPCB-206ENST00000456433 GOLGA3Q08378 1498 aa28.16■■■□□ 2.1
PMPCB-206ENST00000456433 UGGT2Q9NYU1 1516 aa28.12■■■□□ 2.09
PMPCB-206ENST00000456433 PRG4Q92954 1404 aaPredicted RBP28.11■■■□□ 2.09
PMPCB-206ENST00000456433 ERCC6L2Q5T890 1561 aa28.1■■■□□ 2.09
PMPCB-206ENST00000456433 ARAP1Q96P48 1450 aa28.05■■■□□ 2.08
PMPCB-206ENST00000456433 DISP1Q96F81 1524 aa28■■■□□ 2.07
PMPCB-206ENST00000456433 CARMIL2Q6F5E8 1435 aa28■■■□□ 2.07
PMPCB-206ENST00000456433 KIAA0556O60303 1618 aa27.96■■■□□ 2.07
PMPCB-206ENST00000456433 UBTFP17480 764 aaKnown RBP27.95■■■□□ 2.06
PMPCB-206ENST00000456433 SAMD9Q5K651 1589 aa27.91■■■□□ 2.06
PMPCB-206ENST00000456433 TNIKQ9UKE5 1360 aa27.89■■■□□ 2.06
PMPCB-206ENST00000456433 EHMT2Q96KQ7 1210 aa27.88■■■□□ 2.05
PMPCB-206ENST00000456433 CYB5RLQ6IPT4 315 aa27.87■■■□□ 2.05
PMPCB-206ENST00000456433 EFCAB5A4FU69 1503 aa27.85■■■□□ 2.05
PMPCB-206ENST00000456433 PTPRGP23470 1445 aa27.82■■■□□ 2.04
PMPCB-206ENST00000456433 ARHGAP35Q9NRY4 1499 aa27.72■■■□□ 2.03
PMPCB-206ENST00000456433 UHRF1BP1LA0JNW5 1464 aa27.69■■■□□ 2.02
PMPCB-206ENST00000456433 ADCY10Q96PN6 1610 aa27.68■■■□□ 2.02
PMPCB-206ENST00000456433 LOC105371045A0A1W2PR82 267 aa27.68■■■□□ 2.02
PMPCB-206ENST00000456433 RANGAP1P46060 587 aaPredicted RBP27.68■■■□□ 2.02
PMPCB-206ENST00000456433 FHOD3Q2V2M9 1422 aa27.67■■■□□ 2.02
PMPCB-206ENST00000456433 UACAQ9BZF9 1416 aa27.67■■■□□ 2.02
PMPCB-206ENST00000456433 P3H3Q8IVL6 736 aa27.66■■■□□ 2.02
PMPCB-206ENST00000456433 ABCC2Q92887 1545 aa27.65■■■□□ 2.02
PMPCB-206ENST00000456433 ABCA8O94911 1581 aa27.65■■■□□ 2.02
PMPCB-206ENST00000456433 CLIP1P30622 1438 aa27.64■■■□□ 2.02
PMPCB-206ENST00000456433 TTBK1Q5TCY1 1321 aaPredicted RBP27.62■■■□□ 2.01
PMPCB-206ENST00000456433 PLB1Q6P1J6 1458 aa27.6■■■□□ 2.01
PMPCB-206ENST00000456433 CEP162Q5TB80 1403 aa27.59■■■□□ 2.01
PMPCB-206ENST00000456433 FMN1Q68DA7 1419 aa27.56■■■□□ 2
PMPCB-206ENST00000456433 RAPGEF6Q8TEU7 1601 aa27.55■■■□□ 2
PMPCB-206ENST00000456433 KDM5BQ9UGL1 1544 aa27.53■■■□□ 2
PMPCB-206ENST00000456433 MAPKBP1O60336 1514 aa27.49■■□□□ 1.99
PMPCB-206ENST00000456433 NPM1P06748 294 aaKnown RBP eCLIP27.47■■□□□ 1.99
PMPCB-206ENST00000456433 ZCCHC11Q5TAX3 1644 aaKnown RBP27.45■■□□□ 1.99
PMPCB-206ENST00000456433 NUP153P49790 1475 aaKnown RBP27.44■■□□□ 1.98
PMPCB-206ENST00000456433 HECW1Q76N89 1606 aa27.39■■□□□ 1.98
PMPCB-206ENST00000456433 ATP10BO94823 1461 aa27.38■■□□□ 1.97
PMPCB-206ENST00000456433 CASKIN1Q8WXD9 1431 aa27.38■■□□□ 1.97
PMPCB-206ENST00000456433 PCF11O94913 1555 aaKnown RBP27.36■■□□□ 1.97
PMPCB-206ENST00000456433 FYCO1Q9BQS8 1478 aa27.34■■□□□ 1.97
PMPCB-206ENST00000456433 ASXL2Q76L83 1435 aa27.33■■□□□ 1.97
PMPCB-206ENST00000456433 EPRSP07814 1512 aaKnown RBP27.3■■□□□ 1.96
PMPCB-206ENST00000456433 ABCC10Q5T3U5 1492 aa27.28■■□□□ 1.96
PMPCB-206ENST00000456433 WDR7Q9Y4E6 1490 aa27.27■■□□□ 1.96
PMPCB-206ENST00000456433 LRRIQ1Q96JM4 1722 aa27.27■■□□□ 1.96
PMPCB-206ENST00000456433 VPS8Q8N3P4 1428 aa27.26■■□□□ 1.95
PMPCB-206ENST00000456433 DIP2BQ9P265 1576 aa27.26■■□□□ 1.95
PMPCB-206ENST00000456433 CCDC18Q5T9S5 1454 aa27.25■■□□□ 1.95
PMPCB-206ENST00000456433 KIF13AQ9H1H9 1805 aa27.24■■□□□ 1.95
PMPCB-206ENST00000456433 CDK13Q14004 1512 aaKnown RBP27.24■■□□□ 1.95
PMPCB-206ENST00000456433 ARID3CA6NKF2 412 aa27.23■■□□□ 1.95
PMPCB-206ENST00000456433 GLI2P10070 1586 aa27.21■■□□□ 1.95
PMPCB-206ENST00000456433 TRHP20396 242 aaPredicted RBP27.19■■□□□ 1.94
PMPCB-206ENST00000456433 ATP1B4Q9UN42 357 aaPredicted RBP27.19■■□□□ 1.94
PMPCB-206ENST00000456433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.16■■□□□ 1.94
PMPCB-206ENST00000456433 HNRNPUL2Q1KMD3 747 aaKnown RBP27.16■■□□□ 1.94
PMPCB-206ENST00000456433 PLEKHD1A6NEE1 506 aa27.13■■□□□ 1.93
PMPCB-206ENST00000456433 FAM69CQ0P6D2 419 aa27.12■■□□□ 1.93
PMPCB-206ENST00000456433 CDK11AQ9UQ88 783 aaPredicted RBP27.12■■□□□ 1.93
PMPCB-206ENST00000456433 MAP3K4Q9Y6R4 1608 aa27.08■■□□□ 1.93
PMPCB-206ENST00000456433 CFAP43Q8NDM7 1665 aa27.08■■□□□ 1.92
PMPCB-206ENST00000456433 TROQ12816 1431 aaPredicted RBP27.07■■□□□ 1.92
PMPCB-206ENST00000456433 MAP3K1Q13233 1512 aa27.06■■□□□ 1.92
PMPCB-206ENST00000456433 ABCA9Q8IUA7 1624 aa27.05■■□□□ 1.92
PMPCB-206ENST00000456433 KCNH8Q96L42 1107 aa27.04■■□□□ 1.92
PMPCB-206ENST00000456433 MAGI3Q5TCQ9 1506 aa27.04■■□□□ 1.92
PMPCB-206ENST00000456433 TIAM1Q13009 1591 aa27.03■■□□□ 1.92
PMPCB-206ENST00000456433 KIF14Q15058 1648 aa26.99■■□□□ 1.91
PMPCB-206ENST00000456433 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.98■■□□□ 1.91
PMPCB-206ENST00000456433 PPRC1Q5VV67 1664 aaKnown RBP26.98■■□□□ 1.91
PMPCB-206ENST00000456433 EHBP1L1Q8N3D4 1523 aa26.96■■□□□ 1.91
PMPCB-206ENST00000456433 CD109Q6YHK3 1445 aa26.96■■□□□ 1.91
PMPCB-206ENST00000456433 TSPOAP1O95153 1857 aa26.95■■□□□ 1.9
PMPCB-206ENST00000456433 TTC37Q6PGP7 1564 aa26.94■■□□□ 1.9
PMPCB-206ENST00000456433 MTUS2Q5JR59 1369 aa26.93■■□□□ 1.9
PMPCB-206ENST00000456433 TEX14Q8IWB6 1497 aa26.9■■□□□ 1.9
PMPCB-206ENST00000456433 LRRC9Q6ZRR7 1453 aa26.89■■□□□ 1.9
PMPCB-206ENST00000456433 ARAP3Q8WWN8 1544 aa26.86■■□□□ 1.89
PMPCB-206ENST00000456433 MYO5CQ9NQX4 1742 aa26.85■■□□□ 1.89
PMPCB-206ENST00000456433 APLP2Q06481 763 aa26.85■■□□□ 1.89
PMPCB-206ENST00000456433 PLCH2O75038 1416 aa26.83■■□□□ 1.89
PMPCB-206ENST00000456433 SUPT6HQ7KZ85 1726 aaKnown RBP26.82■■□□□ 1.88
PMPCB-206ENST00000456433 NEO1Q92859 1461 aa26.8■■□□□ 1.88
PMPCB-206ENST00000456433 KANK4Q5T7N3 995 aaPredicted RBP26.79■■□□□ 1.88
PMPCB-206ENST00000456433 PREX2Q70Z35 1606 aa26.79■■□□□ 1.88
PMPCB-206ENST00000456433 PHLDB1Q86UU1 1377 aa26.78■■□□□ 1.88
PMPCB-206ENST00000456433 CFAP74Q9C0B2 1584 aa26.78■■□□□ 1.88
PMPCB-206ENST00000456433 CDC42BPAQ5VT25 1732 aa26.78■■□□□ 1.88
PMPCB-206ENST00000456433 NCOA2Q15596 1464 aa26.77■■□□□ 1.88
PMPCB-206ENST00000456433 CDC42BPBQ9Y5S2 1711 aa26.76■■□□□ 1.87
PMPCB-206ENST00000456433 GPATCH8Q9UKJ3 1502 aaKnown RBP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms