RNA–Protein interactions for RNA: ENST00000456224.7

SCN11A-203, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-203ENST00000456224 BIVM-ERCC5R4GMW8 1640 aa6.96□□□□□ -1.29
SCN11A-203ENST00000456224 ARHGAP35Q9NRY4 1499 aa6.96□□□□□ -1.29
SCN11A-203ENST00000456224 CFTRP13569 1480 aa6.96□□□□□ -1.29
SCN11A-203ENST00000456224 FANCD2Q9BXW9 1451 aa6.96□□□□□ -1.3
SCN11A-203ENST00000456224 CCNB3Q8WWL7 1395 aa6.96□□□□□ -1.3
SCN11A-203ENST00000456224 TIMELESSQ9UNS1 1208 aa6.93□□□□□ -1.3
SCN11A-203ENST00000456224 ERCC6Q03468 1493 aa6.93□□□□□ -1.3
SCN11A-203ENST00000456224 EFCAB5A4FU69 1503 aa6.92□□□□□ -1.3
SCN11A-203ENST00000456224 SETD5Q9C0A6 1442 aa6.91□□□□□ -1.3
SCN11A-203ENST00000456224 FGD5Q6ZNL6 1462 aa6.91□□□□□ -1.3
SCN11A-203ENST00000456224 PRDM2Q13029 1718 aa6.91□□□□□ -1.3
SCN11A-203ENST00000456224 FBLN2P98095 1184 aa6.91□□□□□ -1.3
SCN11A-203ENST00000456224 CUX1P39880 1505 aa6.91□□□□□ -1.3
SCN11A-203ENST00000456224 RUSC2Q8N2Y8 1516 aa6.91□□□□□ -1.3
SCN11A-203ENST00000456224 MYT1LQ9UL68 1186 aa6.9□□□□□ -1.3
SCN11A-203ENST00000456224 CC2D2AQ9P2K1 1620 aa6.9□□□□□ -1.3
SCN11A-203ENST00000456224 DNMBPQ6XZF7 1577 aa6.9□□□□□ -1.3
SCN11A-203ENST00000456224 CUL7Q14999 1698 aa6.9□□□□□ -1.31
SCN11A-203ENST00000456224 CHMP7Q8WUX9 453 aaPredicted RBP6.89□□□□□ -1.31
SCN11A-203ENST00000456224 GTF3C3Q9Y5Q9 886 aa6.89□□□□□ -1.31
SCN11A-203ENST00000456224 CCDC18Q5T9S5 1454 aa6.89□□□□□ -1.31
SCN11A-203ENST00000456224 PPP4R3CPQ6ZMV5 832 aa6.89□□□□□ -1.31
SCN11A-203ENST00000456224 LAMC3Q9Y6N6 1575 aa6.88□□□□□ -1.31
SCN11A-203ENST00000456224 PRXQ9BXM0 1461 aa6.87□□□□□ -1.31
SCN11A-203ENST00000456224 ADRA2BP18089 450 aa6.87□□□□□ -1.31
SCN11A-203ENST00000456224 FYCO1Q9BQS8 1478 aa6.86□□□□□ -1.31
SCN11A-203ENST00000456224 CARMIL2Q6F5E8 1435 aa6.86□□□□□ -1.31
SCN11A-203ENST00000456224 POLR3GLQ9BT43 218 aa6.85□□□□□ -1.31
SCN11A-203ENST00000456224 IGF1RP08069 1367 aa6.84□□□□□ -1.31
SCN11A-203ENST00000456224 MAP3K1Q13233 1512 aa6.84□□□□□ -1.31
SCN11A-203ENST00000456224 GAPVD1Q14C86 1478 aa6.84□□□□□ -1.31
SCN11A-203ENST00000456224 ARAP1Q96P48 1450 aa6.83□□□□□ -1.32
SCN11A-203ENST00000456224 CASKIN1Q8WXD9 1431 aa6.83□□□□□ -1.32
SCN11A-203ENST00000456224 ZNF777Q9ULD5 760 aaPredicted RBP6.83□□□□□ -1.32
SCN11A-203ENST00000456224 PLEKHD1A6NEE1 506 aa6.82□□□□□ -1.32
SCN11A-203ENST00000456224 TSPY4P0CV99 314 aa6.82□□□□□ -1.32
SCN11A-203ENST00000456224 TSPY10P0CW01 314 aa6.82□□□□□ -1.32
SCN11A-203ENST00000456224 RRBP1Q9P2E9 1410 aaKnown RBP6.82□□□□□ -1.32
SCN11A-203ENST00000456224 ABCA10Q8WWZ4 1543 aa6.82□□□□□ -1.32
SCN11A-203ENST00000456224 MRC2Q9UBG0 1479 aa6.82□□□□□ -1.32
SCN11A-203ENST00000456224 TOPBP1Q92547 1522 aa6.81□□□□□ -1.32
SCN11A-203ENST00000456224 PIAS4Q8N2W9 510 aaPredicted RBP6.81□□□□□ -1.32
SCN11A-203ENST00000456224 LRRC9Q6ZRR7 1453 aa6.81□□□□□ -1.32
SCN11A-203ENST00000456224 HECW1Q76N89 1606 aa6.81□□□□□ -1.32
SCN11A-203ENST00000456224 EHBP1L1Q8N3D4 1523 aa6.81□□□□□ -1.32
SCN11A-203ENST00000456224 FHOD3Q2V2M9 1422 aa6.81□□□□□ -1.32
SCN11A-203ENST00000456224 TIAM1Q13009 1591 aa6.81□□□□□ -1.32
SCN11A-203ENST00000456224 AQRO60306 1485 aaKnown RBP eCLIP6.81□□□□□ -1.32
SCN11A-203ENST00000456224 RAB3GAP2Q9H2M9 1393 aa6.8□□□□□ -1.32
SCN11A-203ENST00000456224 EIF4G2P78344 907 aaKnown RBP eCLIP6.8□□□□□ -1.32
SCN11A-203ENST00000456224 KANK4Q5T7N3 995 aaPredicted RBP6.8□□□□□ -1.32
SCN11A-203ENST00000456224 IFT140Q96RY7 1462 aa6.8□□□□□ -1.32
SCN11A-203ENST00000456224 ARID3CA6NKF2 412 aa6.78□□□□□ -1.32
SCN11A-203ENST00000456224 CFDP1Q9UEE9 299 aaPredicted RBP6.78□□□□□ -1.32
SCN11A-203ENST00000456224 HAP1P54257 671 aaPredicted RBP6.78□□□□□ -1.32
SCN11A-203ENST00000456224 CHIC2Q9UKJ5 165 aa6.78□□□□□ -1.32
SCN11A-203ENST00000456224 GRIN2BQ13224 1484 aa6.78□□□□□ -1.32
SCN11A-203ENST00000456224 ZNF326Q5BKZ1 582 aaKnown RBP6.78□□□□□ -1.32
SCN11A-203ENST00000456224 DHX57Q6P158 1386 aaKnown RBP6.78□□□□□ -1.32
SCN11A-203ENST00000456224 MIER1Q8N108 512 aa6.78□□□□□ -1.32
SCN11A-203ENST00000456224 TDRD9Q8NDG6 1382 aaKnown RBP6.78□□□□□ -1.32
SCN11A-203ENST00000456224 RAD54L2Q9Y4B4 1467 aa6.78□□□□□ -1.32
SCN11A-203ENST00000456224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.78□□□□□ -1.32
SCN11A-203ENST00000456224 SUPT6HQ7KZ85 1726 aaKnown RBP6.77□□□□□ -1.32
SCN11A-203ENST00000456224 POLA1P09884 1462 aaPredicted RBP6.77□□□□□ -1.33
SCN11A-203ENST00000456224 THOC2Q8NI27 1593 aaKnown RBP6.77□□□□□ -1.33
SCN11A-203ENST00000456224 KIF21AQ7Z4S6 1674 aa6.77□□□□□ -1.33
SCN11A-203ENST00000456224 DAXXQ9UER7 740 aaPredicted RBP6.77□□□□□ -1.33
SCN11A-203ENST00000456224 CTTNBP2Q8WZ74 1663 aa6.76□□□□□ -1.33
SCN11A-203ENST00000456224 RRP7BPQ9NSQ0 103 aa6.76□□□□□ -1.33
SCN11A-203ENST00000456224 CCER2I3L3R5 266 aa6.76□□□□□ -1.33
SCN11A-203ENST00000456224 NPM1P06748 294 aaKnown RBP eCLIP6.76□□□□□ -1.33
SCN11A-203ENST00000456224 DDX10Q13206 875 aaKnown RBP6.76□□□□□ -1.33
SCN11A-203ENST00000456224 MYOM3Q5VTT5 1437 aa6.75□□□□□ -1.33
SCN11A-203ENST00000456224 FGD6Q6ZV73 1430 aa6.75□□□□□ -1.33
SCN11A-203ENST00000456224 ANKRD30AQ9BXX3 1397 aa6.75□□□□□ -1.33
SCN11A-203ENST00000456224 WDR97A6NE52 1622 aa6.73□□□□□ -1.33
SCN11A-203ENST00000456224 RSPH4AQ5TD94 716 aa6.73□□□□□ -1.33
SCN11A-203ENST00000456224 PCF11O94913 1555 aaKnown RBP6.73□□□□□ -1.33
SCN11A-203ENST00000456224 CFAP43Q8NDM7 1665 aa6.73□□□□□ -1.33
SCN11A-203ENST00000456224 NCOA2Q15596 1464 aa6.72□□□□□ -1.33
SCN11A-203ENST00000456224 CDCA8Q53HL2 280 aa6.72□□□□□ -1.33
SCN11A-203ENST00000456224 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.72□□□□□ -1.33
SCN11A-203ENST00000456224 IQGAP2Q13576 1575 aa6.72□□□□□ -1.33
SCN11A-203ENST00000456224 MIA2Q96PC5 1412 aa6.71□□□□□ -1.33
SCN11A-203ENST00000456224 KANK1Q14678 1352 aa6.71□□□□□ -1.34
SCN11A-203ENST00000456224 UACAQ9BZF9 1416 aa6.71□□□□□ -1.34
SCN11A-203ENST00000456224 BCANQ96GW7 911 aa6.7□□□□□ -1.34
SCN11A-203ENST00000456224 FOXD4L1Q9NU39 408 aa6.7□□□□□ -1.34
SCN11A-203ENST00000456224 HNRNPUQ00839 825 aaKnown RBP eCLIP6.7□□□□□ -1.34
SCN11A-203ENST00000456224 FKBP8Q14318 412 aa6.7□□□□□ -1.34
SCN11A-203ENST00000456224 RTN4Q9NQC3 1192 aaKnown RBP6.7□□□□□ -1.34
SCN11A-203ENST00000456224 NESP48681 1621 aa6.69□□□□□ -1.34
SCN11A-203ENST00000456224 SIN3AQ96ST3 1273 aa6.68□□□□□ -1.34
SCN11A-203ENST00000456224 PHLDB1Q86UU1 1377 aa6.68□□□□□ -1.34
SCN11A-203ENST00000456224 ROCK2O75116 1388 aaKnown RBP6.68□□□□□ -1.34
SCN11A-203ENST00000456224 MPHOSPH9Q99550 1183 aa6.68□□□□□ -1.34
SCN11A-203ENST00000456224 MRS2Q9HD23 443 aa6.68□□□□□ -1.34
SCN11A-203ENST00000456224 PPP1R15AO75807 674 aaPredicted RBP6.67□□□□□ -1.34
SCN11A-203ENST00000456224 TMC1Q8TDI8 760 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms