RNA–Protein interactions for RNA: ENST00000456224.7

SCN11A-203, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-203ENST00000456224 NISCHQ9Y2I1 1504 aa9.58□□□□□ -0.88
SCN11A-203ENST00000456224 CHIC1Q5VXU3 224 aa8.95□□□□□ -0.98
SCN11A-203ENST00000456224 DCAF8L2P0C7V8 631 aa8.45□□□□□ -1.06
SCN11A-203ENST00000456224 CCDC180Q9P1Z9 1646 aa8.28□□□□□ -1.08
SCN11A-203ENST00000456224 SHROOM4Q9ULL8 1493 aa8.27□□□□□ -1.09
SCN11A-203ENST00000456224 SUPT5HO00267 1087 aaKnown RBP8.23□□□□□ -1.09
SCN11A-203ENST00000456224 AEBP2Q6ZN18 517 aaPredicted RBP8.16□□□□□ -1.1
SCN11A-203ENST00000456224 ZCCHC6Q5VYS8 1495 aaKnown RBP8.06□□□□□ -1.12
SCN11A-203ENST00000456224 DCAF1Q9Y4B6 1507 aa7.9□□□□□ -1.14
SCN11A-203ENST00000456224 PLPPR3Q6T4P5 718 aa7.87□□□□□ -1.15
SCN11A-203ENST00000456224 TRIM41Q8WV44 630 aa7.8□□□□□ -1.16
SCN11A-203ENST00000456224 EHMT2Q96KQ7 1210 aa7.8□□□□□ -1.16
SCN11A-203ENST00000456224 NACADO15069 1562 aa7.76□□□□□ -1.17
SCN11A-203ENST00000456224 ZEB1P37275 1124 aaPredicted RBP7.76□□□□□ -1.17
SCN11A-203ENST00000456224 ABCC9O60706 1549 aa7.74□□□□□ -1.17
SCN11A-203ENST00000456224 SCRIBQ14160 1630 aa7.74□□□□□ -1.17
SCN11A-203ENST00000456224 RB1CC1Q8TDY2 1594 aa7.72□□□□□ -1.17
SCN11A-203ENST00000456224 MYO15BQ96JP2 1530 aa7.71□□□□□ -1.17
SCN11A-203ENST00000456224 APLP2Q06481 763 aa7.7□□□□□ -1.18
SCN11A-203ENST00000456224 PCGF6Q9BYE7 350 aa7.64□□□□□ -1.19
SCN11A-203ENST00000456224 TRIM26Q12899 539 aaPredicted RBP7.62□□□□□ -1.19
SCN11A-203ENST00000456224 FAM9AQ8IZU1 332 aaPredicted RBP7.62□□□□□ -1.19
SCN11A-203ENST00000456224 SENP3Q9H4L4 574 aaPredicted RBP7.62□□□□□ -1.19
SCN11A-203ENST00000456224 UBTFP17480 764 aaKnown RBP7.53□□□□□ -1.2
SCN11A-203ENST00000456224 HRCP23327 699 aa7.53□□□□□ -1.2
SCN11A-203ENST00000456224 RSF1Q96T23 1441 aaPredicted RBP7.52□□□□□ -1.21
SCN11A-203ENST00000456224 BAZ1AQ9NRL2 1556 aaPredicted RBP7.52□□□□□ -1.21
SCN11A-203ENST00000456224 PHF23Q9BUL5 403 aaPredicted RBP7.48□□□□□ -1.21
SCN11A-203ENST00000456224 PELP1Q8IZL8 1130 aaKnown RBP7.47□□□□□ -1.21
SCN11A-203ENST00000456224 CCER1Q8TC90 406 aaPredicted RBP7.47□□□□□ -1.21
SCN11A-203ENST00000456224 LOC105371045A0A1W2PR82 267 aa7.45□□□□□ -1.22
SCN11A-203ENST00000456224 EEA1Q15075 1411 aa7.44□□□□□ -1.22
SCN11A-203ENST00000456224 NCBP3Q53F19 620 aaKnown RBP7.42□□□□□ -1.22
SCN11A-203ENST00000456224 PABPN1Q86U42 306 aaKnown RBP eCLIP7.42□□□□□ -1.22
SCN11A-203ENST00000456224 CENPBP07199 599 aaPredicted RBP7.41□□□□□ -1.22
SCN11A-203ENST00000456224 TOP2AP11388 1531 aaKnown RBP7.39□□□□□ -1.23
SCN11A-203ENST00000456224 SMARCA2P51531 1590 aa7.36□□□□□ -1.23
SCN11A-203ENST00000456224 BAZ1BQ9UIG0 1483 aaKnown RBP7.35□□□□□ -1.23
SCN11A-203ENST00000456224 SLC24A1O60721 1099 aa7.35□□□□□ -1.23
SCN11A-203ENST00000456224 TTBK1Q5TCY1 1321 aaPredicted RBP7.35□□□□□ -1.23
SCN11A-203ENST00000456224 CSRNP3Q8WYN3 585 aa7.34□□□□□ -1.24
SCN11A-203ENST00000456224 MROH2BQ7Z745 1585 aa7.34□□□□□ -1.24
SCN11A-203ENST00000456224 SMARCA4P51532 1647 aa7.33□□□□□ -1.24
SCN11A-203ENST00000456224 RANGAP1P46060 587 aaPredicted RBP7.32□□□□□ -1.24
SCN11A-203ENST00000456224 GOLGA3Q08378 1498 aa7.32□□□□□ -1.24
SCN11A-203ENST00000456224 SLC4A1APQ9BWU0 796 aaKnown RBP7.32□□□□□ -1.24
SCN11A-203ENST00000456224 CECR2Q9BXF3 1484 aa7.31□□□□□ -1.24
SCN11A-203ENST00000456224 WIZO95785 1651 aa7.3□□□□□ -1.24
SCN11A-203ENST00000456224 WRNQ14191 1432 aaPredicted RBP eCLIP7.28□□□□□ -1.24
SCN11A-203ENST00000456224 ATP1B4Q9UN42 357 aaPredicted RBP7.28□□□□□ -1.24
SCN11A-203ENST00000456224 CEP164Q9UPV0 1460 aa7.28□□□□□ -1.24
SCN11A-203ENST00000456224 CCDC88BA6NC98 1476 aa7.26□□□□□ -1.25
SCN11A-203ENST00000456224 TNIKQ9UKE5 1360 aa7.26□□□□□ -1.25
SCN11A-203ENST00000456224 PPARGC1BQ86YN6 1023 aaKnown RBP7.24□□□□□ -1.25
SCN11A-203ENST00000456224 CEP162Q5TB80 1403 aa7.22□□□□□ -1.25
SCN11A-203ENST00000456224 CLIP1P30622 1438 aa7.2□□□□□ -1.26
SCN11A-203ENST00000456224 AMER1Q5JTC6 1135 aaPredicted RBP7.19□□□□□ -1.26
SCN11A-203ENST00000456224 KIF27Q86VH2 1401 aa7.19□□□□□ -1.26
SCN11A-203ENST00000456224 HNRNPUL2Q1KMD3 747 aaKnown RBP7.19□□□□□ -1.26
SCN11A-203ENST00000456224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.17□□□□□ -1.26
SCN11A-203ENST00000456224 ATAD2BQ9ULI0 1458 aa7.16□□□□□ -1.26
SCN11A-203ENST00000456224 DIEXFQ68CQ4 756 aaKnown RBP7.15□□□□□ -1.26
SCN11A-203ENST00000456224 ABCC8Q09428 1581 aa7.15□□□□□ -1.27
SCN11A-203ENST00000456224 ACIN1Q9UKV3 1341 aaKnown RBP7.14□□□□□ -1.27
SCN11A-203ENST00000456224 MYT1Q01538 1121 aa7.13□□□□□ -1.27
SCN11A-203ENST00000456224 NEFLP07196 543 aa7.13□□□□□ -1.27
SCN11A-203ENST00000456224 ZNF316A6NFI3 1004 aaPredicted RBP7.12□□□□□ -1.27
SCN11A-203ENST00000456224 KCNA4P22459 653 aa7.12□□□□□ -1.27
SCN11A-203ENST00000456224 FAM50AQ14320 339 aaKnown RBP7.11□□□□□ -1.27
SCN11A-203ENST00000456224 ITGAEP38570 1179 aa7.1□□□□□ -1.27
SCN11A-203ENST00000456224 HMGXB3Q12766 1538 aa7.1□□□□□ -1.27
SCN11A-203ENST00000456224 KIF21BO75037 1637 aa7.09□□□□□ -1.27
SCN11A-203ENST00000456224 PEG3Q9GZU2 1588 aa7.09□□□□□ -1.27
SCN11A-203ENST00000456224 SOGA1O94964 1423 aa7.09□□□□□ -1.27
SCN11A-203ENST00000456224 UNC13AQ9UPW8 1703 aa7.08□□□□□ -1.28
SCN11A-203ENST00000456224 CLSPNQ9HAW4 1339 aa7.08□□□□□ -1.28
SCN11A-203ENST00000456224 FHAD1B1AJZ9 1412 aa7.08□□□□□ -1.28
SCN11A-203ENST00000456224 VPS8Q8N3P4 1428 aa7.08□□□□□ -1.28
SCN11A-203ENST00000456224 YTHDC1Q96MU7 727 aaKnown RBP7.06□□□□□ -1.28
SCN11A-203ENST00000456224 CDK11AQ9UQ88 783 aaPredicted RBP7.06□□□□□ -1.28
SCN11A-203ENST00000456224 NCAPD3P42695 1498 aa7.06□□□□□ -1.28
SCN11A-203ENST00000456224 SCAF1Q9H7N4 1312 aaKnown RBP7.04□□□□□ -1.28
SCN11A-203ENST00000456224 ERICH3Q5RHP9 1530 aa7.04□□□□□ -1.28
SCN11A-203ENST00000456224 EIF4G1Q04637 1599 aaKnown RBP7.04□□□□□ -1.28
SCN11A-203ENST00000456224 CUX2O14529 1486 aa7.03□□□□□ -1.28
SCN11A-203ENST00000456224 PDS5BQ9NTI5 1447 aa7.03□□□□□ -1.28
SCN11A-203ENST00000456224 BICRAQ9NZM4 1560 aa7.03□□□□□ -1.28
SCN11A-203ENST00000456224 TOP2BQ02880 1626 aa7.02□□□□□ -1.28
SCN11A-203ENST00000456224 CADPSQ9ULU8 1353 aa7.02□□□□□ -1.29
SCN11A-203ENST00000456224 CARMIL1Q5VZK9 1371 aa7.01□□□□□ -1.29
SCN11A-203ENST00000456224 RAPGEF2Q9Y4G8 1499 aa7.01□□□□□ -1.29
SCN11A-203ENST00000456224 TRIM52Q96A61 297 aa7□□□□□ -1.29
SCN11A-203ENST00000456224 MTUS2Q5JR59 1369 aa7□□□□□ -1.29
SCN11A-203ENST00000456224 ERICH6Q7L0X2 663 aa6.99□□□□□ -1.29
SCN11A-203ENST00000456224 ANP32CO43423 234 aa6.98□□□□□ -1.29
SCN11A-203ENST00000456224 SYNJ1O43426 1573 aa6.97□□□□□ -1.29
SCN11A-203ENST00000456224 FMN1Q68DA7 1419 aa6.97□□□□□ -1.29
SCN11A-203ENST00000456224 P3H3Q8IVL6 736 aa6.97□□□□□ -1.29
SCN11A-203ENST00000456224 NEUROD1Q13562 356 aa6.97□□□□□ -1.29
SCN11A-203ENST00000456224 TONSLQ96HA7 1378 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms