RNA–Protein interactions for RNA: ENST00000454994.3

AL139260.3-202, humanhuman

TSL 2

Gene AL139260.3, Length 2,381 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139260.3-202ENST00000454994 MIER1Q8N108 512 aa20.11■□□□□ 0.81
AL139260.3-202ENST00000454994 DHX57Q6P158 1386 aaKnown RBP20.11■□□□□ 0.81
AL139260.3-202ENST00000454994 GTF3C3Q9Y5Q9 886 aa20.09■□□□□ 0.81
AL139260.3-202ENST00000454994 P3H3Q8IVL6 736 aa20.09■□□□□ 0.81
AL139260.3-202ENST00000454994 ABCA5Q8WWZ7 1642 aa20.09■□□□□ 0.81
AL139260.3-202ENST00000454994 CTTNBP2Q8WZ74 1663 aa20.06■□□□□ 0.8
AL139260.3-202ENST00000454994 RRBP1Q9P2E9 1410 aaKnown RBP20.05■□□□□ 0.8
AL139260.3-202ENST00000454994 CENPBP07199 599 aaPredicted RBP20.05■□□□□ 0.8
AL139260.3-202ENST00000454994 CCNB3Q8WWL7 1395 aa20.02■□□□□ 0.8
AL139260.3-202ENST00000454994 TARBP1Q13395 1621 aaKnown RBP20.01■□□□□ 0.79
AL139260.3-202ENST00000454994 MAP3K1Q13233 1512 aa20■□□□□ 0.79
AL139260.3-202ENST00000454994 ATP1B4Q9UN42 357 aaPredicted RBP19.99■□□□□ 0.79
AL139260.3-202ENST00000454994 GAPVD1Q14C86 1478 aa19.98■□□□□ 0.79
AL139260.3-202ENST00000454994 TIAM1Q13009 1591 aa19.98■□□□□ 0.79
AL139260.3-202ENST00000454994 EFCAB5A4FU69 1503 aa19.97■□□□□ 0.79
AL139260.3-202ENST00000454994 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.78
AL139260.3-202ENST00000454994 FHAD1B1AJZ9 1412 aa19.94■□□□□ 0.78
AL139260.3-202ENST00000454994 PCF11O94913 1555 aaKnown RBP19.93■□□□□ 0.78
AL139260.3-202ENST00000454994 FHOD3Q2V2M9 1422 aa19.92■□□□□ 0.78
AL139260.3-202ENST00000454994 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
AL139260.3-202ENST00000454994 CFAP43Q8NDM7 1665 aa19.91■□□□□ 0.78
AL139260.3-202ENST00000454994 PHLDB1Q86UU1 1377 aa19.91■□□□□ 0.78
AL139260.3-202ENST00000454994 PBRM1Q86U86 1689 aa19.9■□□□□ 0.78
AL139260.3-202ENST00000454994 LRRC9Q6ZRR7 1453 aa19.89■□□□□ 0.77
AL139260.3-202ENST00000454994 RAB3GAP2Q9H2M9 1393 aa19.88■□□□□ 0.77
AL139260.3-202ENST00000454994 FAM50AQ14320 339 aaKnown RBP19.87■□□□□ 0.77
AL139260.3-202ENST00000454994 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.773e-7■■■■■ 30.5
AL139260.3-202ENST00000454994 CLSPNQ9HAW4 1339 aa19.85■□□□□ 0.77
AL139260.3-202ENST00000454994 SAMD9Q5K651 1589 aa19.84■□□□□ 0.77
AL139260.3-202ENST00000454994 FYCO1Q9BQS8 1478 aa19.84■□□□□ 0.77
AL139260.3-202ENST00000454994 WDR62O43379 1518 aa19.82■□□□□ 0.76
AL139260.3-202ENST00000454994 MAPKBP1O60336 1514 aa19.81■□□□□ 0.76
AL139260.3-202ENST00000454994 CASKIN1Q8WXD9 1431 aa19.81■□□□□ 0.76
AL139260.3-202ENST00000454994 FMN1Q68DA7 1419 aa19.78■□□□□ 0.76
AL139260.3-202ENST00000454994 ADAMTS12P58397 1594 aa19.77■□□□□ 0.76
AL139260.3-202ENST00000454994 IFT140Q96RY7 1462 aa19.76■□□□□ 0.75
AL139260.3-202ENST00000454994 SNAPC4Q5SXM2 1469 aa19.74■□□□□ 0.75
AL139260.3-202ENST00000454994 SIN3AQ96ST3 1273 aa19.74■□□□□ 0.75
AL139260.3-202ENST00000454994 SETD5Q9C0A6 1442 aa19.74■□□□□ 0.75
AL139260.3-202ENST00000454994 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
AL139260.3-202ENST00000454994 LRRIQ1Q96JM4 1722 aa19.7■□□□□ 0.74
AL139260.3-202ENST00000454994 THOC2Q8NI27 1593 aaKnown RBP19.68■□□□□ 0.74
AL139260.3-202ENST00000454994 IQGAP2Q13576 1575 aa19.67■□□□□ 0.74
AL139260.3-202ENST00000454994 ZNF608Q9ULD9 1512 aaPredicted RBP19.67■□□□□ 0.74
AL139260.3-202ENST00000454994 PELP1Q8IZL8 1130 aaKnown RBP19.64■□□□□ 0.74
AL139260.3-202ENST00000454994 ERCC6Q03468 1493 aa19.63■□□□□ 0.73
AL139260.3-202ENST00000454994 EIF4G3O43432 1585 aaKnown RBP19.63■□□□□ 0.73
AL139260.3-202ENST00000454994 KCNH8Q96L42 1107 aa19.62■□□□□ 0.73
AL139260.3-202ENST00000454994 HIRIP3Q9BW71 556 aaPredicted RBP19.61■□□□□ 0.73
AL139260.3-202ENST00000454994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.59■□□□□ 0.73
AL139260.3-202ENST00000454994 MTUS2Q5JR59 1369 aa19.58■□□□□ 0.72
AL139260.3-202ENST00000454994 UGGT2Q9NYU1 1516 aa19.57■□□□□ 0.72
AL139260.3-202ENST00000454994 FGD6Q6ZV73 1430 aa19.57■□□□□ 0.72
AL139260.3-202ENST00000454994 PTPRKQ15262 1439 aa19.56■□□□□ 0.72
AL139260.3-202ENST00000454994 ARID3CA6NKF2 412 aa19.56■□□□□ 0.72
AL139260.3-202ENST00000454994 SUPT6HQ7KZ85 1726 aaKnown RBP19.54■□□□□ 0.72
AL139260.3-202ENST00000454994 HECW1Q76N89 1606 aa19.54■□□□□ 0.72
AL139260.3-202ENST00000454994 CCDC18Q5T9S5 1454 aa19.54■□□□□ 0.72
AL139260.3-202ENST00000454994 EHBP1L1Q8N3D4 1523 aa19.53■□□□□ 0.72
AL139260.3-202ENST00000454994 KIAA0586Q9BVV6 1533 aa19.52■□□□□ 0.72
AL139260.3-202ENST00000454994 GRIN2AQ12879 1464 aa19.52■□□□□ 0.72
AL139260.3-202ENST00000454994 NCOA2Q15596 1464 aa19.5■□□□□ 0.71
AL139260.3-202ENST00000454994 MAGI1Q96QZ7 1491 aaPredicted RBP19.5■□□□□ 0.71
AL139260.3-202ENST00000454994 DDX10Q13206 875 aaKnown RBP19.5■□□□□ 0.71
AL139260.3-202ENST00000454994 MAGI3Q5TCQ9 1506 aa19.5■□□□□ 0.71
AL139260.3-202ENST00000454994 KIAA0556O60303 1618 aa19.47■□□□□ 0.71
AL139260.3-202ENST00000454994 ARHGEF11O15085 1522 aa19.47■□□□□ 0.71
AL139260.3-202ENST00000454994 EPRSP07814 1512 aaKnown RBP19.45■□□□□ 0.7
AL139260.3-202ENST00000454994 MYOM3Q5VTT5 1437 aa19.44■□□□□ 0.7
AL139260.3-202ENST00000454994 DISP1Q96F81 1524 aa19.44■□□□□ 0.7
AL139260.3-202ENST00000454994 PTPN23Q9H3S7 1636 aa19.44■□□□□ 0.7
AL139260.3-202ENST00000454994 SYNJ2O15056 1496 aa19.43■□□□□ 0.7
AL139260.3-202ENST00000454994 CHIC2Q9UKJ5 165 aa19.43■□□□□ 0.7
AL139260.3-202ENST00000454994 CEP170Q5SW79 1584 aa19.4■□□□□ 0.7
AL139260.3-202ENST00000454994 RRP7BPQ9NSQ0 103 aa19.4■□□□□ 0.7
AL139260.3-202ENST00000454994 CDK13Q14004 1512 aaKnown RBP19.4■□□□□ 0.7
AL139260.3-202ENST00000454994 HFM1A2PYH4 1435 aa19.39■□□□□ 0.69
AL139260.3-202ENST00000454994 PPP1R15AO75807 674 aaPredicted RBP19.39■□□□□ 0.69
AL139260.3-202ENST00000454994 NAIPQ13075 1403 aa19.39■□□□□ 0.69
AL139260.3-202ENST00000454994 RAPGEF6Q8TEU7 1601 aa19.36■□□□□ 0.69
AL139260.3-202ENST00000454994 TONSLQ96HA7 1378 aa19.36■□□□□ 0.69
AL139260.3-202ENST00000454994 SUPT16HQ9Y5B9 1047 aaKnown RBP19.35■□□□□ 0.69
AL139260.3-202ENST00000454994 CHMP7Q8WUX9 453 aaPredicted RBP19.35■□□□□ 0.69
AL139260.3-202ENST00000454994 UACAQ9BZF9 1416 aa19.34■□□□□ 0.69
AL139260.3-202ENST00000454994 TCOF1Q13428 1488 aaKnown RBP19.34■□□□□ 0.69
AL139260.3-202ENST00000454994 KDM6BO15054 1643 aa19.34■□□□□ 0.69
AL139260.3-202ENST00000454994 NUP160Q12769 1436 aa19.33■□□□□ 0.69
AL139260.3-202ENST00000454994 NUP153P49790 1475 aaKnown RBP19.3■□□□□ 0.68
AL139260.3-202ENST00000454994 MIA2Q96PC5 1412 aa19.29■□□□□ 0.68
AL139260.3-202ENST00000454994 FOXD1Q16676 465 aa19.27■□□□□ 0.68
AL139260.3-202ENST00000454994 TRIM52Q96A61 297 aa19.26■□□□□ 0.67
AL139260.3-202ENST00000454994 TIMELESSQ9UNS1 1208 aa19.26■□□□□ 0.67
AL139260.3-202ENST00000454994 DENND4BO75064 1496 aaPredicted RBP19.26■□□□□ 0.67
AL139260.3-202ENST00000454994 GCC2Q8IWJ2 1684 aa19.25■□□□□ 0.67
AL139260.3-202ENST00000454994 KDM5BQ9UGL1 1544 aa19.25■□□□□ 0.67
AL139260.3-202ENST00000454994 CARMIL2Q6F5E8 1435 aa19.24■□□□□ 0.67
AL139260.3-202ENST00000454994 FBLN2P98095 1184 aa19.24■□□□□ 0.67
AL139260.3-202ENST00000454994 ZNF644Q9H582 1327 aaPredicted RBP19.21■□□□□ 0.67
AL139260.3-202ENST00000454994 AKNAQ7Z591 1439 aa19.21■□□□□ 0.67
AL139260.3-202ENST00000454994 BCANQ96GW7 911 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms