RNA–Protein interactions for RNA: ENST00000453664.5

USP19-208, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene USP19, Length 4,719 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-208ENST00000453664 IRX6P78412 446 aaPredicted RBP18.61■□□□□ 0.57
USP19-208ENST00000453664 ARXQ96QS3 562 aa18.6■□□□□ 0.57
USP19-208ENST00000453664 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
USP19-208ENST00000453664 CHIC2Q9UKJ5 165 aa18.58■□□□□ 0.57
USP19-208ENST00000453664 SUPT16HQ9Y5B9 1047 aaKnown RBP18.57■□□□□ 0.56
USP19-208ENST00000453664 VPS8Q8N3P4 1428 aa18.56■□□□□ 0.56
USP19-208ENST00000453664 FHAD1B1AJZ9 1412 aa18.56■□□□□ 0.56
USP19-208ENST00000453664 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
USP19-208ENST00000453664 SLC24A1O60721 1099 aa18.52■□□□□ 0.56
USP19-208ENST00000453664 CCDC136Q96JN2 1154 aa18.52■□□□□ 0.55
USP19-208ENST00000453664 TSPY4P0CV99 314 aa18.51■□□□□ 0.55
USP19-208ENST00000453664 TSPY10P0CW01 314 aa18.51■□□□□ 0.55
USP19-208ENST00000453664 SLC4A1APQ9BWU0 796 aaKnown RBP18.51■□□□□ 0.55
USP19-208ENST00000453664 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
USP19-208ENST00000453664 DEKP35659 375 aaKnown RBP18.49■□□□□ 0.55
USP19-208ENST00000453664 ANP32BQ92688 251 aaKnown RBP18.48■□□□□ 0.55
USP19-208ENST00000453664 NPM1P06748 294 aaKnown RBP eCLIP18.47■□□□□ 0.55
USP19-208ENST00000453664 PLEKHD1A6NEE1 506 aa18.46■□□□□ 0.55
USP19-208ENST00000453664 CCNB3Q8WWL7 1395 aa18.43■□□□□ 0.54
USP19-208ENST00000453664 NEFMP07197 916 aa18.43■□□□□ 0.54
USP19-208ENST00000453664 FAM9BQ8IZU0 186 aa18.43■□□□□ 0.54
USP19-208ENST00000453664 RRP7BPQ9NSQ0 103 aa18.42■□□□□ 0.54
USP19-208ENST00000453664 NCAPD3P42695 1498 aa18.41■□□□□ 0.54
USP19-208ENST00000453664 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.37■□□□□ 0.53
USP19-208ENST00000453664 RUSC2Q8N2Y8 1516 aa18.37■□□□□ 0.53
USP19-208ENST00000453664 RBM19Q9Y4C8 960 aaKnown RBP18.37■□□□□ 0.53
USP19-208ENST00000453664 TDRD9Q8NDG6 1382 aaKnown RBP18.37■□□□□ 0.53
USP19-208ENST00000453664 RAPGEF2Q9Y4G8 1499 aa18.36■□□□□ 0.53
USP19-208ENST00000453664 CFDP1Q9UEE9 299 aaPredicted RBP18.35■□□□□ 0.53
USP19-208ENST00000453664 CANXP27824 592 aaKnown RBP18.34■□□□□ 0.53
USP19-208ENST00000453664 ERICH6BQ5W0A0 696 aa18.34■□□□□ 0.53
USP19-208ENST00000453664 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.52
USP19-208ENST00000453664 KANK4Q5T7N3 995 aaPredicted RBP18.32■□□□□ 0.52
USP19-208ENST00000453664 TIMELESSQ9UNS1 1208 aa18.32■□□□□ 0.52
USP19-208ENST00000453664 TSHZ2Q9NRE2 1034 aa18.31■□□□□ 0.52
USP19-208ENST00000453664 NOP58Q9Y2X3 529 aaKnown RBP18.31■□□□□ 0.52
USP19-208ENST00000453664 FANCD2Q9BXW9 1451 aa18.3■□□□□ 0.52
USP19-208ENST00000453664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.3■□□□□ 0.52
USP19-208ENST00000453664 LAS1LQ9Y4W2 734 aaKnown RBP18.29■□□□□ 0.52
USP19-208ENST00000453664 FMN1Q68DA7 1419 aa18.29■□□□□ 0.52
USP19-208ENST00000453664 HSP90AA1P07900 732 aaKnown RBP18.28■□□□□ 0.52
USP19-208ENST00000453664 NAP1L5Q96NT1 182 aaPredicted RBP18.28■□□□□ 0.52
USP19-208ENST00000453664 HIRIP3Q9BW71 556 aaPredicted RBP18.28■□□□□ 0.52
USP19-208ENST00000453664 CCER2I3L3R5 266 aa18.27■□□□□ 0.52
USP19-208ENST00000453664 MRS2Q9HD23 443 aa18.27■□□□□ 0.51
USP19-208ENST00000453664 SALL2Q9Y467 1007 aaPredicted RBP18.27■□□□□ 0.51
USP19-208ENST00000453664 EIF4G2P78344 907 aaKnown RBP eCLIP18.25■□□□□ 0.51
USP19-208ENST00000453664 KCNH8Q96L42 1107 aa18.25■□□□□ 0.51
USP19-208ENST00000453664 UPF2Q9HAU5 1272 aaKnown RBP18.25■□□□□ 0.51
USP19-208ENST00000453664 ARHGAP35Q9NRY4 1499 aa18.24■□□□□ 0.51
USP19-208ENST00000453664 PRKCSHP14314 528 aaPredicted RBP18.21■□□□□ 0.51
USP19-208ENST00000453664 PPM1GO15355 546 aaPredicted RBP18.2■□□□□ 0.5
USP19-208ENST00000453664 TRIM44Q96DX7 344 aaPredicted RBP18.2■□□□□ 0.5
USP19-208ENST00000453664 SETD5Q9C0A6 1442 aa18.19■□□□□ 0.5
USP19-208ENST00000453664 CHGAP10645 457 aaKnown RBP18.19■□□□□ 0.5
USP19-208ENST00000453664 KDM2AQ9Y2K7 1162 aa18.18■□□□□ 0.5
USP19-208ENST00000453664 PPP4R2Q9NY27 417 aa18.18■□□□□ 0.5
USP19-208ENST00000453664 SIN3AQ96ST3 1273 aa18.18■□□□□ 0.5
USP19-208ENST00000453664 CARMIL2Q6F5E8 1435 aa18.16■□□□□ 0.5
USP19-208ENST00000453664 TNNT2P45379 298 aaPredicted RBP18.16■□□□□ 0.5
USP19-208ENST00000453664 IGF1RP08069 1367 aa18.16■□□□□ 0.5
USP19-208ENST00000453664 FGD5Q6ZNL6 1462 aa18.15■□□□□ 0.5
USP19-208ENST00000453664 ESF1Q9H501 851 aaKnown RBP18.15■□□□□ 0.5
USP19-208ENST00000453664 DDRGK1Q96HY6 314 aa18.14■□□□□ 0.49
USP19-208ENST00000453664 FHOD3Q2V2M9 1422 aa18.14■□□□□ 0.49
USP19-208ENST00000453664 CFTRP13569 1480 aa18.14■□□□□ 0.49
USP19-208ENST00000453664 TMC1Q8TDI8 760 aa18.13■□□□□ 0.49
USP19-208ENST00000453664 HMGXB3Q12766 1538 aa18.12■□□□□ 0.49
USP19-208ENST00000453664 DHX57Q6P158 1386 aaKnown RBP18.11■□□□□ 0.49
USP19-208ENST00000453664 BICRAQ9NZM4 1560 aa18.1■□□□□ 0.49
USP19-208ENST00000453664 STAG3Q9UJ98 1225 aa18.08■□□□□ 0.49
USP19-208ENST00000453664 B4GALNT3Q6L9W6 998 aa18.08■□□□□ 0.48
USP19-208ENST00000453664 RAB3GAP2Q9H2M9 1393 aa18.07■□□□□ 0.48
USP19-208ENST00000453664 SYNJ1O43426 1573 aa18.05■□□□□ 0.48
USP19-208ENST00000453664 ARID4BQ4LE39 1312 aaPredicted RBP18.05■□□□□ 0.48
USP19-208ENST00000453664 KIF21BO75037 1637 aa18.03■□□□□ 0.48
USP19-208ENST00000453664 SENP3-EIF4A1A0A087X0R7 540 aa18.02■□□□□ 0.48
USP19-208ENST00000453664 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
USP19-208ENST00000453664 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
USP19-208ENST00000453664 RGL3Q3MIN7 710 aa18.01■□□□□ 0.47
USP19-208ENST00000453664 ERICH3Q5RHP9 1530 aa17.99■□□□□ 0.47
USP19-208ENST00000453664 BECN1Q14457 450 aa17.98■□□□□ 0.47
USP19-208ENST00000453664 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.98■□□□□ 0.47
USP19-208ENST00000453664 JPH4Q96JJ6 628 aa17.97■□□□□ 0.47
USP19-208ENST00000453664 TOP2BQ02880 1626 aa17.97■□□□□ 0.47
USP19-208ENST00000453664 PPP1R15AO75807 674 aaPredicted RBP17.97■□□□□ 0.47
USP19-208ENST00000453664 CARD11Q9BXL7 1154 aa17.96■□□□□ 0.47
USP19-208ENST00000453664 AMER1Q5JTC6 1135 aaPredicted RBP17.96■□□□□ 0.47
USP19-208ENST00000453664 CDK11BP21127 795 aaKnown RBP17.95■□□□□ 0.46
USP19-208ENST00000453664 CCDC18Q5T9S5 1454 aa17.95■□□□□ 0.46
USP19-208ENST00000453664 CC2D2AQ9P2K1 1620 aa17.92■□□□□ 0.46
USP19-208ENST00000453664 PEG3Q9GZU2 1588 aa17.92■□□□□ 0.46
USP19-208ENST00000453664 PRXQ9BXM0 1461 aa17.92■□□□□ 0.46
USP19-208ENST00000453664 VSIG10Q8N0Z9 540 aa17.91■□□□□ 0.46
USP19-208ENST00000453664 DNTTIP2Q5QJE6 756 aaKnown RBP17.9■□□□□ 0.46
USP19-208ENST00000453664 MPHOSPH9Q99550 1183 aa17.9■□□□□ 0.46
USP19-208ENST00000453664 CUX1P39880 1505 aa17.9■□□□□ 0.46
USP19-208ENST00000453664 CDCA8Q53HL2 280 aa17.89■□□□□ 0.45
USP19-208ENST00000453664 ANKRD30AQ9BXX3 1397 aa17.89■□□□□ 0.45
USP19-208ENST00000453664 WDR43Q15061 677 aaKnown RBP eCLIP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms