RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 KIAA0586Q9BVV6 1533 aa39.67■■■■□ 3.94
CPSF4-207ENST00000451876 SHROOM2Q13796 1616 aa39.62■■■■□ 3.93
CPSF4-207ENST00000451876 IQGAP2Q13576 1575 aa39.6■■■■□ 3.93
CPSF4-207ENST00000451876 EHMT2Q96KQ7 1210 aa39.59■■■■□ 3.93
CPSF4-207ENST00000451876 GOLGA3Q08378 1498 aa39.59■■■■□ 3.93
CPSF4-207ENST00000451876 ARHGEF11O15085 1522 aa39.5■■■■□ 3.91
CPSF4-207ENST00000451876 RIMBP3CA6NJZ7 1639 aa39.47■■■■□ 3.91
CPSF4-207ENST00000451876 RIMBP3BA6NNM3 1639 aa39.47■■■■□ 3.91
CPSF4-207ENST00000451876 RIMBP3Q9UFD9 1639 aa39.47■■■■□ 3.91
CPSF4-207ENST00000451876 JPH4Q96JJ6 628 aa39.46■■■■□ 3.91
CPSF4-207ENST00000451876 ERCC6L2Q5T890 1561 aa39.46■■■■□ 3.91
CPSF4-207ENST00000451876 PRG4Q92954 1404 aaPredicted RBP39.39■■■■□ 3.9
CPSF4-207ENST00000451876 UBTFP17480 764 aaKnown RBP39.38■■■■□ 3.89
CPSF4-207ENST00000451876 UGGT2Q9NYU1 1516 aa39.37■■■■□ 3.89
CPSF4-207ENST00000451876 DISP1Q96F81 1524 aa39.27■■■■□ 3.88
CPSF4-207ENST00000451876 KIAA0556O60303 1618 aa39.23■■■■□ 3.87
CPSF4-207ENST00000451876 ARAP1Q96P48 1450 aa39.23■■■■□ 3.87
CPSF4-207ENST00000451876 LOC105371045A0A1W2PR82 267 aa39.19■■■■□ 3.86
CPSF4-207ENST00000451876 CARMIL2Q6F5E8 1435 aa39.18■■■■□ 3.86
CPSF4-207ENST00000451876 SAMD9Q5K651 1589 aa39.17■■■■□ 3.86
CPSF4-207ENST00000451876 RANGAP1P46060 587 aaPredicted RBP39.17■■■■□ 3.86
CPSF4-207ENST00000451876 TNIKQ9UKE5 1360 aa39.15■■■■□ 3.86
CPSF4-207ENST00000451876 EFCAB5A4FU69 1503 aa39.05■■■■□ 3.84
CPSF4-207ENST00000451876 CYB5RLQ6IPT4 315 aa39.03■■■■□ 3.84
CPSF4-207ENST00000451876 P3H3Q8IVL6 736 aa39■■■■□ 3.83
CPSF4-207ENST00000451876 ARHGAP35Q9NRY4 1499 aa38.97■■■■□ 3.83
CPSF4-207ENST00000451876 TTBK1Q5TCY1 1321 aaPredicted RBP38.97■■■■□ 3.83
CPSF4-207ENST00000451876 PTPRGP23470 1445 aa38.96■■■■□ 3.83
CPSF4-207ENST00000451876 FHOD3Q2V2M9 1422 aa38.93■■■■□ 3.82
CPSF4-207ENST00000451876 CLIP1P30622 1438 aa38.89■■■■□ 3.82
CPSF4-207ENST00000451876 CEP162Q5TB80 1403 aa38.88■■■■□ 3.81
CPSF4-207ENST00000451876 ADCY10Q96PN6 1610 aa38.81■■■■□ 3.8
CPSF4-207ENST00000451876 PLB1Q6P1J6 1458 aa38.77■■■■□ 3.8
CPSF4-207ENST00000451876 ABCA8O94911 1581 aa38.75■■■■□ 3.79
CPSF4-207ENST00000451876 UACAQ9BZF9 1416 aa38.73■■■■□ 3.79
CPSF4-207ENST00000451876 ABCC2Q92887 1545 aa38.71■■■■□ 3.79
CPSF4-207ENST00000451876 RAPGEF6Q8TEU7 1601 aa38.67■■■■□ 3.78
CPSF4-207ENST00000451876 UHRF1BP1LA0JNW5 1464 aa38.67■■■■□ 3.78
CPSF4-207ENST00000451876 FMN1Q68DA7 1419 aa38.63■■■■□ 3.77
CPSF4-207ENST00000451876 PCF11O94913 1555 aaKnown RBP38.54■■■■□ 3.76
CPSF4-207ENST00000451876 NUP153P49790 1475 aaKnown RBP38.52■■■■□ 3.76
CPSF4-207ENST00000451876 ZCCHC11Q5TAX3 1644 aaKnown RBP38.52■■■■□ 3.76
CPSF4-207ENST00000451876 KDM5BQ9UGL1 1544 aa38.51■■■■□ 3.76
CPSF4-207ENST00000451876 HECW1Q76N89 1606 aa38.46■■■■□ 3.75
CPSF4-207ENST00000451876 LRRIQ1Q96JM4 1722 aa38.44■■■■□ 3.74
CPSF4-207ENST00000451876 ARID3CA6NKF2 412 aa38.43■■■■□ 3.74
CPSF4-207ENST00000451876 CASKIN1Q8WXD9 1431 aa38.42■■■■□ 3.74
CPSF4-207ENST00000451876 NPM1P06748 294 aaKnown RBP eCLIP38.41■■■■□ 3.74
CPSF4-207ENST00000451876 ATP10BO94823 1461 aa38.39■■■■□ 3.74
CPSF4-207ENST00000451876 MAPKBP1O60336 1514 aa38.39■■■■□ 3.74
CPSF4-207ENST00000451876 FYCO1Q9BQS8 1478 aa38.38■■■■□ 3.73
CPSF4-207ENST00000451876 VPS8Q8N3P4 1428 aa38.35■■■■□ 3.73
CPSF4-207ENST00000451876 ATP1B4Q9UN42 357 aaPredicted RBP38.34■■■■□ 3.73
CPSF4-207ENST00000451876 CDK13Q14004 1512 aaKnown RBP38.34■■■■□ 3.73
CPSF4-207ENST00000451876 EPRSP07814 1512 aaKnown RBP38.33■■■■□ 3.73
CPSF4-207ENST00000451876 ASXL2Q76L83 1435 aa38.28■■■■□ 3.72
CPSF4-207ENST00000451876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.22■■■■□ 3.71
CPSF4-207ENST00000451876 HNRNPUL2Q1KMD3 747 aaKnown RBP38.22■■■■□ 3.71
CPSF4-207ENST00000451876 CCDC18Q5T9S5 1454 aa38.2■■■■□ 3.71
CPSF4-207ENST00000451876 WDR7Q9Y4E6 1490 aa38.18■■■■□ 3.7
CPSF4-207ENST00000451876 KIF13AQ9H1H9 1805 aa38.15■■■■□ 3.7
CPSF4-207ENST00000451876 DIP2BQ9P265 1576 aa38.14■■■■□ 3.7
CPSF4-207ENST00000451876 ABCC10Q5T3U5 1492 aa38.11■■■■□ 3.69
CPSF4-207ENST00000451876 CFAP43Q8NDM7 1665 aa38.1■■■■□ 3.69
CPSF4-207ENST00000451876 MAGI3Q5TCQ9 1506 aa38.06■■■■□ 3.68
CPSF4-207ENST00000451876 TIAM1Q13009 1591 aa38.03■■■■□ 3.68
CPSF4-207ENST00000451876 PLEKHD1A6NEE1 506 aa38.02■■■■□ 3.68
CPSF4-207ENST00000451876 TRHP20396 242 aaPredicted RBP38.01■■■■□ 3.68
CPSF4-207ENST00000451876 KCNH8Q96L42 1107 aa37.99■■■■□ 3.67
CPSF4-207ENST00000451876 GLI2P10070 1586 aa37.98■■■■□ 3.67
CPSF4-207ENST00000451876 CDK11AQ9UQ88 783 aaPredicted RBP37.97■■■■□ 3.67
CPSF4-207ENST00000451876 FAM69CQ0P6D2 419 aa37.96■■■■□ 3.67
CPSF4-207ENST00000451876 TROQ12816 1431 aaPredicted RBP37.96■■■■□ 3.67
CPSF4-207ENST00000451876 KIF14Q15058 1648 aa37.94■■■■□ 3.66
CPSF4-207ENST00000451876 MAP3K1Q13233 1512 aa37.92■■■■□ 3.66
CPSF4-207ENST00000451876 MAP3K4Q9Y6R4 1608 aa37.9■■■■□ 3.66
CPSF4-207ENST00000451876 ABCA9Q8IUA7 1624 aa37.9■■■■□ 3.66
CPSF4-207ENST00000451876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.86■■■■□ 3.657e-9■■■□□ 17.9
CPSF4-207ENST00000451876 TTC37Q6PGP7 1564 aa37.86■■■■□ 3.65
CPSF4-207ENST00000451876 EHBP1L1Q8N3D4 1523 aa37.86■■■■□ 3.65
CPSF4-207ENST00000451876 TSPOAP1O95153 1857 aa37.85■■■■□ 3.65
CPSF4-207ENST00000451876 MTUS2Q5JR59 1369 aa37.85■■■■□ 3.65
CPSF4-207ENST00000451876 LRRC9Q6ZRR7 1453 aa37.82■■■■□ 3.64
CPSF4-207ENST00000451876 PPRC1Q5VV67 1664 aaKnown RBP37.8■■■■□ 3.64
CPSF4-207ENST00000451876 APLP2Q06481 763 aa37.79■■■■□ 3.64
CPSF4-207ENST00000451876 KANK4Q5T7N3 995 aaPredicted RBP37.78■■■■□ 3.64
CPSF4-207ENST00000451876 CD109Q6YHK3 1445 aa37.73■■■■□ 3.63
CPSF4-207ENST00000451876 SUPT6HQ7KZ85 1726 aaKnown RBP37.71■■■■□ 3.63
CPSF4-207ENST00000451876 MYO5CQ9NQX4 1742 aa37.7■■■■□ 3.63
CPSF4-207ENST00000451876 CDC42BPAQ5VT25 1732 aa37.66■■■■□ 3.62
CPSF4-207ENST00000451876 NCOA2Q15596 1464 aa37.63■■■■□ 3.61
CPSF4-207ENST00000451876 CDC42BPBQ9Y5S2 1711 aa37.61■■■■□ 3.61
CPSF4-207ENST00000451876 PREX2Q70Z35 1606 aa37.61■■■■□ 3.61
CPSF4-207ENST00000451876 PLCH2O75038 1416 aa37.57■■■■□ 3.61
CPSF4-207ENST00000451876 TEX14Q8IWB6 1497 aa37.57■■■■□ 3.6
CPSF4-207ENST00000451876 ARAP3Q8WWN8 1544 aa37.54■■■■□ 3.6
CPSF4-207ENST00000451876 GPATCH8Q9UKJ3 1502 aaKnown RBP37.54■■■■□ 3.6
CPSF4-207ENST00000451876 ITSN2Q9NZM3 1697 aa37.52■■■■□ 3.6
CPSF4-207ENST00000451876 CCNB3Q8WWL7 1395 aa37.51■■■■□ 3.59
CPSF4-207ENST00000451876 ARHGAP5Q13017 1502 aa37.5■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms