RNA–Protein interactions for RNA: ENST00000448830.1

SERF2-213, Transcript of small EDRK-rich factor 2, humanhuman

TSL 2

Gene SERF2, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-213ENST00000448830 TIAM1Q13009 1591 aa19.8■□□□□ 0.76
SERF2-213ENST00000448830 ITGAEP38570 1179 aa19.79■□□□□ 0.76
SERF2-213ENST00000448830 URB2Q14146 1524 aaKnown RBP19.79■□□□□ 0.76
SERF2-213ENST00000448830 LAMC3Q9Y6N6 1575 aa19.78■□□□□ 0.76
SERF2-213ENST00000448830 MAP3K1Q13233 1512 aa19.78■□□□□ 0.76
SERF2-213ENST00000448830 CLSPNQ9HAW4 1339 aa19.78■□□□□ 0.76
SERF2-213ENST00000448830 LRRC9Q6ZRR7 1453 aa19.75■□□□□ 0.75
SERF2-213ENST00000448830 FHAD1B1AJZ9 1412 aa19.74■□□□□ 0.75
SERF2-213ENST00000448830 ATP1B4Q9UN42 357 aaPredicted RBP19.73■□□□□ 0.75
SERF2-213ENST00000448830 FHOD3Q2V2M9 1422 aa19.72■□□□□ 0.75
SERF2-213ENST00000448830 BCL11AQ9H165 835 aa19.72■□□□□ 0.75
SERF2-213ENST00000448830 TDRD9Q8NDG6 1382 aaKnown RBP19.71■□□□□ 0.75
SERF2-213ENST00000448830 CUL7Q14999 1698 aa19.7■□□□□ 0.74
SERF2-213ENST00000448830 PHLDB1Q86UU1 1377 aa19.7■□□□□ 0.74
SERF2-213ENST00000448830 PCF11O94913 1555 aaKnown RBP19.69■□□□□ 0.74
SERF2-213ENST00000448830 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
SERF2-213ENST00000448830 SLC24A1O60721 1099 aa19.68■□□□□ 0.74
SERF2-213ENST00000448830 WDR97A6NE52 1622 aa19.67■□□□□ 0.74
SERF2-213ENST00000448830 MIER1Q8N108 512 aa19.66■□□□□ 0.74
SERF2-213ENST00000448830 EFCAB5A4FU69 1503 aa19.64■□□□□ 0.73
SERF2-213ENST00000448830 RAB3GAP2Q9H2M9 1393 aa19.64■□□□□ 0.73
SERF2-213ENST00000448830 CFAP43Q8NDM7 1665 aa19.63■□□□□ 0.73
SERF2-213ENST00000448830 YTHDC1Q96MU7 727 aaKnown RBP19.63■□□□□ 0.73
SERF2-213ENST00000448830 CTTNBP2Q8WZ74 1663 aa19.63■□□□□ 0.73
SERF2-213ENST00000448830 GAPVD1Q14C86 1478 aa19.62■□□□□ 0.73
SERF2-213ENST00000448830 CASKIN1Q8WXD9 1431 aa19.62■□□□□ 0.73
SERF2-213ENST00000448830 FAM50AQ14320 339 aaKnown RBP19.62■□□□□ 0.73
SERF2-213ENST00000448830 ABCA5Q8WWZ7 1642 aa19.61■□□□□ 0.73
SERF2-213ENST00000448830 FYCO1Q9BQS8 1478 aa19.61■□□□□ 0.73
SERF2-213ENST00000448830 KIF21AQ7Z4S6 1674 aa19.6■□□□□ 0.73
SERF2-213ENST00000448830 AQRO60306 1485 aaKnown RBP eCLIP19.59■□□□□ 0.732e-8■■■■■ 42.4
SERF2-213ENST00000448830 SETD5Q9C0A6 1442 aa19.57■□□□□ 0.72
SERF2-213ENST00000448830 FMN1Q68DA7 1419 aa19.55■□□□□ 0.72
SERF2-213ENST00000448830 SNAPC4Q5SXM2 1469 aa19.52■□□□□ 0.72
SERF2-213ENST00000448830 MAPKBP1O60336 1514 aa19.52■□□□□ 0.72
SERF2-213ENST00000448830 TARBP1Q13395 1621 aaKnown RBP19.51■□□□□ 0.71
SERF2-213ENST00000448830 SAMD9Q5K651 1589 aa19.49■□□□□ 0.71
SERF2-213ENST00000448830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.44■□□□□ 0.75e-37■□□□□ 10.7
SERF2-213ENST00000448830 MTUS2Q5JR59 1369 aa19.44■□□□□ 0.7
SERF2-213ENST00000448830 SIN3AQ96ST3 1273 aa19.43■□□□□ 0.7
SERF2-213ENST00000448830 GRIN2BQ13224 1484 aa19.43■□□□□ 0.7
SERF2-213ENST00000448830 FGD6Q6ZV73 1430 aa19.42■□□□□ 0.7
SERF2-213ENST00000448830 LRRIQ1Q96JM4 1722 aa19.42■□□□□ 0.7
SERF2-213ENST00000448830 MRC2Q9UBG0 1479 aa19.38■□□□□ 0.69
SERF2-213ENST00000448830 PBRM1Q86U86 1689 aa19.37■□□□□ 0.69
SERF2-213ENST00000448830 PTPRKQ15262 1439 aa19.35■□□□□ 0.69
SERF2-213ENST00000448830 NCOA2Q15596 1464 aa19.35■□□□□ 0.69
SERF2-213ENST00000448830 ANP32EQ9BTT0 268 aa19.32■□□□□ 0.68
SERF2-213ENST00000448830 ERCC6Q03468 1493 aa19.32■□□□□ 0.68
SERF2-213ENST00000448830 THOC2Q8NI27 1593 aaKnown RBP19.32■□□□□ 0.68
SERF2-213ENST00000448830 MYOM3Q5VTT5 1437 aa19.32■□□□□ 0.68
SERF2-213ENST00000448830 ADAMTS12P58397 1594 aa19.31■□□□□ 0.68
SERF2-213ENST00000448830 MAGI3Q5TCQ9 1506 aa19.3■□□□□ 0.68
SERF2-213ENST00000448830 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
SERF2-213ENST00000448830 IQGAP2Q13576 1575 aa19.29■□□□□ 0.68
SERF2-213ENST00000448830 PRKCSHP14314 528 aaPredicted RBP19.28■□□□□ 0.68
SERF2-213ENST00000448830 EHBP1L1Q8N3D4 1523 aa19.28■□□□□ 0.68
SERF2-213ENST00000448830 SUPT6HQ7KZ85 1726 aaKnown RBP19.28■□□□□ 0.68
SERF2-213ENST00000448830 HFM1A2PYH4 1435 aa19.26■□□□□ 0.67
SERF2-213ENST00000448830 TIMELESSQ9UNS1 1208 aa19.26■□□□□ 0.67
SERF2-213ENST00000448830 UGGT2Q9NYU1 1516 aa19.26■□□□□ 0.67
SERF2-213ENST00000448830 CCDC18Q5T9S5 1454 aa19.25■□□□□ 0.67
SERF2-213ENST00000448830 IFT140Q96RY7 1462 aa19.25■□□□□ 0.67
SERF2-213ENST00000448830 ARHGEF11O15085 1522 aa19.25■□□□□ 0.67
SERF2-213ENST00000448830 WDR62O43379 1518 aa19.24■□□□□ 0.67
SERF2-213ENST00000448830 ARID3CA6NKF2 412 aa19.23■□□□□ 0.67
SERF2-213ENST00000448830 PPP1R15AO75807 674 aaPredicted RBP19.23■□□□□ 0.67
SERF2-213ENST00000448830 NAIPQ13075 1403 aa19.23■□□□□ 0.67
SERF2-213ENST00000448830 EPRSP07814 1512 aaKnown RBP19.22■□□□□ 0.67
SERF2-213ENST00000448830 PTPN23Q9H3S7 1636 aa19.22■□□□□ 0.67
SERF2-213ENST00000448830 HECW1Q76N89 1606 aa19.21■□□□□ 0.67
SERF2-213ENST00000448830 UACAQ9BZF9 1416 aa19.2■□□□□ 0.66
SERF2-213ENST00000448830 CDK13Q14004 1512 aaKnown RBP19.2■□□□□ 0.66
SERF2-213ENST00000448830 CHIC2Q9UKJ5 165 aa19.18■□□□□ 0.66
SERF2-213ENST00000448830 RRP7BPQ9NSQ0 103 aa19.17■□□□□ 0.66
SERF2-213ENST00000448830 HIRIP3Q9BW71 556 aaPredicted RBP19.15■□□□□ 0.66
SERF2-213ENST00000448830 TCOF1Q13428 1488 aaKnown RBP19.15■□□□□ 0.66
SERF2-213ENST00000448830 KIAA0586Q9BVV6 1533 aa19.15■□□□□ 0.66
SERF2-213ENST00000448830 DDX10Q13206 875 aaKnown RBP19.15■□□□□ 0.66
SERF2-213ENST00000448830 DISP1Q96F81 1524 aa19.13■□□□□ 0.65
SERF2-213ENST00000448830 KCNH8Q96L42 1107 aa19.12■□□□□ 0.65
SERF2-213ENST00000448830 TONSLQ96HA7 1378 aa19.12■□□□□ 0.65
SERF2-213ENST00000448830 TSHZ2Q9NRE2 1034 aa19.1■□□□□ 0.65
SERF2-213ENST00000448830 GRIN2AQ12879 1464 aa19.1■□□□□ 0.65
SERF2-213ENST00000448830 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
SERF2-213ENST00000448830 KIAA0556O60303 1618 aa19.09■□□□□ 0.65
SERF2-213ENST00000448830 MIA2Q96PC5 1412 aa19.09■□□□□ 0.65
SERF2-213ENST00000448830 NUP153P49790 1475 aaKnown RBP19.05■□□□□ 0.64
SERF2-213ENST00000448830 CHMP7Q8WUX9 453 aaPredicted RBP19.05■□□□□ 0.64
SERF2-213ENST00000448830 TRIM52Q96A61 297 aa19.05■□□□□ 0.64
SERF2-213ENST00000448830 KDM6BO15054 1643 aa19.05■□□□□ 0.64
SERF2-213ENST00000448830 DENND4BO75064 1496 aaPredicted RBP19.04■□□□□ 0.64
SERF2-213ENST00000448830 SUPT16HQ9Y5B9 1047 aaKnown RBP19.04■□□□□ 0.64
SERF2-213ENST00000448830 FBLN2P98095 1184 aa19.02■□□□□ 0.64
SERF2-213ENST00000448830 ZNF644Q9H582 1327 aaPredicted RBP19.02■□□□□ 0.63
SERF2-213ENST00000448830 GCC2Q8IWJ2 1684 aa19.02■□□□□ 0.63
SERF2-213ENST00000448830 AKNAQ7Z591 1439 aa19.01■□□□□ 0.63
SERF2-213ENST00000448830 RAPGEF6Q8TEU7 1601 aa19■□□□□ 0.63
SERF2-213ENST00000448830 MAGI1Q96QZ7 1491 aaPredicted RBP19■□□□□ 0.63
SERF2-213ENST00000448830 KDM5BQ9UGL1 1544 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms