RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
TRIM4-204ENST00000447480 MYT1Q01538 1121 aa12.05□□□□□ -0.48
TRIM4-204ENST00000447480 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
TRIM4-204ENST00000447480 CUX2O14529 1486 aa12.05□□□□□ -0.48
TRIM4-204ENST00000447480 DNMBPQ6XZF7 1577 aa12.05□□□□□ -0.48
TRIM4-204ENST00000447480 WDR62O43379 1518 aa12.04□□□□□ -0.48
TRIM4-204ENST00000447480 THOC2Q8NI27 1593 aaKnown RBP12.04□□□□□ -0.48
TRIM4-204ENST00000447480 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
TRIM4-204ENST00000447480 PCGF6Q9BYE7 350 aa12.01□□□□□ -0.49
TRIM4-204ENST00000447480 TRIM26Q12899 539 aaPredicted RBP12□□□□□ -0.49
TRIM4-204ENST00000447480 WRNQ14191 1432 aaPredicted RBP eCLIP12□□□□□ -0.49
TRIM4-204ENST00000447480 ZNF692Q9BU19 519 aaPredicted RBP11.99□□□□□ -0.49
TRIM4-204ENST00000447480 BIVM-ERCC5R4GMW8 1640 aa11.98□□□□□ -0.49
TRIM4-204ENST00000447480 TOP2BQ02880 1626 aa11.97□□□□□ -0.49
TRIM4-204ENST00000447480 TOPBP1Q92547 1522 aa11.97□□□□□ -0.49
TRIM4-204ENST00000447480 WDR97A6NE52 1622 aa11.96□□□□□ -0.5
TRIM4-204ENST00000447480 URB2Q14146 1524 aaKnown RBP11.95□□□□□ -0.5
TRIM4-204ENST00000447480 SSUH2Q9Y2M2 353 aa11.94□□□□□ -0.5
TRIM4-204ENST00000447480 REM2Q8IYK8 340 aaPredicted RBP11.93□□□□□ -0.5
TRIM4-204ENST00000447480 IFT140Q96RY7 1462 aa11.93□□□□□ -0.5
TRIM4-204ENST00000447480 CUX1P39880 1505 aa11.91□□□□□ -0.5
TRIM4-204ENST00000447480 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
TRIM4-204ENST00000447480 FGD5Q6ZNL6 1462 aa11.89□□□□□ -0.51
TRIM4-204ENST00000447480 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
TRIM4-204ENST00000447480 POLA1P09884 1462 aaPredicted RBP11.88□□□□□ -0.51
TRIM4-204ENST00000447480 SYNJ1O43426 1573 aa11.88□□□□□ -0.51
TRIM4-204ENST00000447480 SOGA1O94964 1423 aa11.86□□□□□ -0.51
TRIM4-204ENST00000447480 ABCA10Q8WWZ4 1543 aa11.83□□□□□ -0.52
TRIM4-204ENST00000447480 TARBP1Q13395 1621 aaKnown RBP11.82□□□□□ -0.52
TRIM4-204ENST00000447480 EEA1Q15075 1411 aa11.8□□□□□ -0.52
TRIM4-204ENST00000447480 PITPNM1O00562 1244 aa11.8□□□□□ -0.52
TRIM4-204ENST00000447480 CHRDL2Q6WN34 429 aa11.8□□□□□ -0.52
TRIM4-204ENST00000447480 KIF27Q86VH2 1401 aa11.79□□□□□ -0.52
TRIM4-204ENST00000447480 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
TRIM4-204ENST00000447480 GRIN2BQ13224 1484 aa11.75□□□□□ -0.53
TRIM4-204ENST00000447480 GAPVD1Q14C86 1478 aa11.75□□□□□ -0.53
TRIM4-204ENST00000447480 ERICH3Q5RHP9 1530 aa11.75□□□□□ -0.53
TRIM4-204ENST00000447480 ABCA5Q8WWZ7 1642 aa11.75□□□□□ -0.53
TRIM4-204ENST00000447480 FKBP8Q14318 412 aa11.74□□□□□ -0.53
TRIM4-204ENST00000447480 PPARGC1BQ86YN6 1023 aaKnown RBP11.74□□□□□ -0.53
TRIM4-204ENST00000447480 SPDYE1Q8NFV5 336 aaPredicted RBP11.74□□□□□ -0.53
TRIM4-204ENST00000447480 RAD54L2Q9Y4B4 1467 aa11.74□□□□□ -0.53
TRIM4-204ENST00000447480 PBRM1Q86U86 1689 aa11.74□□□□□ -0.53
TRIM4-204ENST00000447480 CUL7Q14999 1698 aa11.73□□□□□ -0.53
TRIM4-204ENST00000447480 CLEC11AQ9Y240 323 aa11.73□□□□□ -0.53
TRIM4-204ENST00000447480 MAGI1Q96QZ7 1491 aaPredicted RBP11.72□□□□□ -0.53
TRIM4-204ENST00000447480 TDRD9Q8NDG6 1382 aaKnown RBP11.67□□□□□ -0.54
TRIM4-204ENST00000447480 ZNF608Q9ULD9 1512 aaPredicted RBP11.67□□□□□ -0.54
TRIM4-204ENST00000447480 AQRO60306 1485 aaKnown RBP eCLIP11.66□□□□□ -0.549e-7■■■■□ 26.7
TRIM4-204ENST00000447480 FHAD1B1AJZ9 1412 aa11.65□□□□□ -0.54
TRIM4-204ENST00000447480 SYNJ2O15056 1496 aa11.64□□□□□ -0.55
TRIM4-204ENST00000447480 POTEHQ6S545 545 aa11.64□□□□□ -0.55
TRIM4-204ENST00000447480 PROM2Q8N271 834 aa11.64□□□□□ -0.55
TRIM4-204ENST00000447480 ADAMTS12P58397 1594 aa11.62□□□□□ -0.55
TRIM4-204ENST00000447480 PIP4P2Q8N4L2 257 aa11.62□□□□□ -0.55
TRIM4-204ENST00000447480 SNAPC4Q5SXM2 1469 aa11.62□□□□□ -0.55
TRIM4-204ENST00000447480 LOC105371045A0A1W2PR82 267 aa11.61□□□□□ -0.55
TRIM4-204ENST00000447480 CHMP7Q8WUX9 453 aaPredicted RBP11.61□□□□□ -0.55
TRIM4-204ENST00000447480 IGF1RP08069 1367 aa11.59□□□□□ -0.55
TRIM4-204ENST00000447480 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRIM4-204ENST00000447480 RAPGEF2Q9Y4G8 1499 aa11.58□□□□□ -0.56
TRIM4-204ENST00000447480 CARMIL1Q5VZK9 1371 aa11.58□□□□□ -0.56
TRIM4-204ENST00000447480 PRR29P0C7W0 189 aa11.58□□□□□ -0.56
TRIM4-204ENST00000447480 CHD1O14646 1710 aa11.57□□□□□ -0.56
TRIM4-204ENST00000447480 KIF21BO75037 1637 aa11.57□□□□□ -0.56
TRIM4-204ENST00000447480 GRIN2AQ12879 1464 aa11.56□□□□□ -0.56
TRIM4-204ENST00000447480 STAG3Q9UJ98 1225 aa11.55□□□□□ -0.56
TRIM4-204ENST00000447480 PRXQ9BXM0 1461 aa11.53□□□□□ -0.56
TRIM4-204ENST00000447480 CENPBP07199 599 aaPredicted RBP11.53□□□□□ -0.56
TRIM4-204ENST00000447480 FAM9AQ8IZU1 332 aaPredicted RBP11.53□□□□□ -0.56
TRIM4-204ENST00000447480 GOLGA3Q08378 1498 aa11.51□□□□□ -0.57
TRIM4-204ENST00000447480 CTTNBP2Q8WZ74 1663 aa11.51□□□□□ -0.57
TRIM4-204ENST00000447480 ACIN1Q9UKV3 1341 aaKnown RBP11.51□□□□□ -0.57
TRIM4-204ENST00000447480 PRKAR2AP13861 404 aaKnown RBP11.5□□□□□ -0.57
TRIM4-204ENST00000447480 RUSC2Q8N2Y8 1516 aa11.5□□□□□ -0.57
TRIM4-204ENST00000447480 NUP160Q12769 1436 aa11.48□□□□□ -0.57
TRIM4-204ENST00000447480 KIAA0586Q9BVV6 1533 aa11.47□□□□□ -0.57
TRIM4-204ENST00000447480 CHADLQ6NUI6 762 aa11.47□□□□□ -0.57
TRIM4-204ENST00000447480 IQGAP2Q13576 1575 aa11.45□□□□□ -0.58
TRIM4-204ENST00000447480 CARMIL2Q6F5E8 1435 aa11.43□□□□□ -0.58
TRIM4-204ENST00000447480 UBTFP17480 764 aaKnown RBP11.43□□□□□ -0.58
TRIM4-204ENST00000447480 CLASP1Q7Z460 1538 aa11.43□□□□□ -0.58
TRIM4-204ENST00000447480 CEP170Q5SW79 1584 aa11.42□□□□□ -0.58
TRIM4-204ENST00000447480 SHROOM2Q13796 1616 aa11.4□□□□□ -0.58
TRIM4-204ENST00000447480 CREBZFQ9NS37 354 aa11.4□□□□□ -0.58
TRIM4-204ENST00000447480 EFCAB5A4FU69 1503 aa11.4□□□□□ -0.59
TRIM4-204ENST00000447480 UGGT2Q9NYU1 1516 aa11.38□□□□□ -0.59
TRIM4-204ENST00000447480 TNIKQ9UKE5 1360 aa11.38□□□□□ -0.59
TRIM4-204ENST00000447480 CLSPNQ9HAW4 1339 aa11.37□□□□□ -0.59
TRIM4-204ENST00000447480 JPH4Q96JJ6 628 aa11.36□□□□□ -0.59
TRIM4-204ENST00000447480 TTBK1Q5TCY1 1321 aaPredicted RBP11.35□□□□□ -0.59
TRIM4-204ENST00000447480 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
TRIM4-204ENST00000447480 FARP1Q9Y4F1 1045 aaPredicted RBP11.32□□□□□ -0.6
TRIM4-204ENST00000447480 PRG4Q92954 1404 aaPredicted RBP11.32□□□□□ -0.6
TRIM4-204ENST00000447480 DIEXFQ68CQ4 756 aaKnown RBP11.31□□□□□ -0.6
TRIM4-204ENST00000447480 SAMD9Q5K651 1589 aa11.31□□□□□ -0.6
TRIM4-204ENST00000447480 KIAA0556O60303 1618 aa11.31□□□□□ -0.6
TRIM4-204ENST00000447480 MIER1Q8N108 512 aa11.3□□□□□ -0.6
TRIM4-204ENST00000447480 ARHGEF11O15085 1522 aa11.3□□□□□ -0.6
TRIM4-204ENST00000447480 FMN1Q68DA7 1419 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms