RNA–Protein interactions for RNA: ENST00000447431.6

SRRM1-203, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-203ENST00000447431 ERICH6BQ5W0A0 696 aa6.84□□□□□ -1.31
SRRM1-203ENST00000447431 PODXL2Q9NZ53 605 aa6.84□□□□□ -1.31
SRRM1-203ENST00000447431 SLC4A2P04920 1241 aa6.83□□□□□ -1.32
SRRM1-203ENST00000447431 DEKP35659 375 aaKnown RBP6.81□□□□□ -1.32
SRRM1-203ENST00000447431 ANP32AP39687 249 aaKnown RBP6.81□□□□□ -1.32
SRRM1-203ENST00000447431 FANCIQ9NVI1 1328 aa6.81□□□□□ -1.32
SRRM1-203ENST00000447431 RNF216Q9NWF9 866 aaPredicted RBP6.81□□□□□ -1.32
SRRM1-203ENST00000447431 ITGAEP38570 1179 aa6.79□□□□□ -1.32
SRRM1-203ENST00000447431 VASPP50552 380 aaPredicted RBP6.79□□□□□ -1.32
SRRM1-203ENST00000447431 TMEM132AQ24JP5 1023 aa6.78□□□□□ -1.32
SRRM1-203ENST00000447431 DDX10Q13206 875 aaKnown RBP6.77□□□□□ -1.33
SRRM1-203ENST00000447431 GOLGA3Q08378 1498 aa6.77□□□□□ -1.33
SRRM1-203ENST00000447431 CCER2I3L3R5 266 aa6.77□□□□□ -1.33
SRRM1-203ENST00000447431 TRIM52Q96A61 297 aa6.77□□□□□ -1.33
SRRM1-203ENST00000447431 BBXQ8WY36 941 aaPredicted RBP6.76□□□□□ -1.33
SRRM1-203ENST00000447431 ZBTB47Q9UFB7 747 aaPredicted RBP6.75□□□□□ -1.33
SRRM1-203ENST00000447431 SPRYD3Q8NCJ5 442 aa6.75□□□□□ -1.33
SRRM1-203ENST00000447431 NOP58Q9Y2X3 529 aaKnown RBP6.75□□□□□ -1.33
SRRM1-203ENST00000447431 GLIPR1L2Q4G1C9 344 aa6.74□□□□□ -1.33
SRRM1-203ENST00000447431 PPP4R2Q9NY27 417 aa6.74□□□□□ -1.33
SRRM1-203ENST00000447431 CLIP1P30622 1438 aa6.74□□□□□ -1.33
SRRM1-203ENST00000447431 HNRNPUQ00839 825 aaKnown RBP eCLIP6.73□□□□□ -1.33
SRRM1-203ENST00000447431 DNAJC5BQ9UF47 199 aa6.73□□□□□ -1.33
SRRM1-203ENST00000447431 ECM2O94769 699 aaPredicted RBP6.73□□□□□ -1.33
SRRM1-203ENST00000447431 KLHL34Q8N239 644 aa6.73□□□□□ -1.33
SRRM1-203ENST00000447431 PKD2Q13563 968 aa6.73□□□□□ -1.33
SRRM1-203ENST00000447431 EIF5BO60841 1220 aaKnown RBP6.72□□□□□ -1.33
SRRM1-203ENST00000447431 IFNLR1Q8IU57 520 aaPredicted RBP6.71□□□□□ -1.34
SRRM1-203ENST00000447431 DMRT2Q9Y5R5 561 aa6.71□□□□□ -1.34
SRRM1-203ENST00000447431 SCRIBQ14160 1630 aa6.7□□□□□ -1.34
SRRM1-203ENST00000447431 CEP164Q9UPV0 1460 aa6.7□□□□□ -1.34
SRRM1-203ENST00000447431 VPS8Q8N3P4 1428 aa6.69□□□□□ -1.34
SRRM1-203ENST00000447431 SPDYE4A6NLX3 237 aa6.69□□□□□ -1.34
SRRM1-203ENST00000447431 DHX57Q6P158 1386 aaKnown RBP6.69□□□□□ -1.34
SRRM1-203ENST00000447431 PPM1GO15355 546 aaPredicted RBP6.67□□□□□ -1.34
SRRM1-203ENST00000447431 NPM1P06748 294 aaKnown RBP eCLIP6.67□□□□□ -1.34
SRRM1-203ENST00000447431 ATF5Q9Y2D1 282 aaPredicted RBP6.67□□□□□ -1.34
SRRM1-203ENST00000447431 CCDC136Q96JN2 1154 aa6.66□□□□□ -1.34
SRRM1-203ENST00000447431 IRX6P78412 446 aaPredicted RBP6.66□□□□□ -1.34
SRRM1-203ENST00000447431 USP35Q9P2H5 1018 aa6.65□□□□□ -1.34
SRRM1-203ENST00000447431 TONSLQ96HA7 1378 aa6.65□□□□□ -1.35
SRRM1-203ENST00000447431 SOGA1O94964 1423 aa6.65□□□□□ -1.35
SRRM1-203ENST00000447431 CHGAP10645 457 aaKnown RBP6.64□□□□□ -1.35
SRRM1-203ENST00000447431 ANO8Q9HCE9 1232 aaPredicted RBP6.64□□□□□ -1.35
SRRM1-203ENST00000447431 KCNH8Q96L42 1107 aa6.64□□□□□ -1.35
SRRM1-203ENST00000447431 DCAF8L1A6NGE4 600 aa6.64□□□□□ -1.35
SRRM1-203ENST00000447431 IPO9Q96P70 1041 aaKnown RBP6.64□□□□□ -1.35
SRRM1-203ENST00000447431 CCDC88BA6NC98 1476 aa6.63□□□□□ -1.35
SRRM1-203ENST00000447431 NEFMP07197 916 aa6.62□□□□□ -1.35
SRRM1-203ENST00000447431 FAM50AQ14320 339 aaKnown RBP6.62□□□□□ -1.35
SRRM1-203ENST00000447431 DDRGK1Q96HY6 314 aa6.62□□□□□ -1.35
SRRM1-203ENST00000447431 NPM2Q86SE8 214 aaKnown RBP6.61□□□□□ -1.35
SRRM1-203ENST00000447431 CCNB3Q8WWL7 1395 aa6.61□□□□□ -1.35
SRRM1-203ENST00000447431 B4GALNT3Q6L9W6 998 aa6.61□□□□□ -1.35
SRRM1-203ENST00000447431 HOXD11P31277 338 aaPredicted RBP6.6□□□□□ -1.35
SRRM1-203ENST00000447431 UBE2Q2Q8WVN8 375 aa6.6□□□□□ -1.35
SRRM1-203ENST00000447431 ATP1B4Q9UN42 357 aaPredicted RBP6.6□□□□□ -1.35
SRRM1-203ENST00000447431 MROH2BQ7Z745 1585 aa6.59□□□□□ -1.35
SRRM1-203ENST00000447431 CECR2Q9BXF3 1484 aa6.59□□□□□ -1.35
SRRM1-203ENST00000447431 FAM9BQ8IZU0 186 aa6.59□□□□□ -1.35
SRRM1-203ENST00000447431 BAZ1BQ9UIG0 1483 aaKnown RBP6.59□□□□□ -1.36
SRRM1-203ENST00000447431 MRS2Q9HD23 443 aa6.58□□□□□ -1.36
SRRM1-203ENST00000447431 SALL2Q9Y467 1007 aaPredicted RBP6.58□□□□□ -1.36
SRRM1-203ENST00000447431 BAZ1AQ9NRL2 1556 aaPredicted RBP6.58□□□□□ -1.36
SRRM1-203ENST00000447431 RSPH6AQ9H0K4 717 aa6.58□□□□□ -1.36
SRRM1-203ENST00000447431 ABCC8Q09428 1581 aa6.57□□□□□ -1.36
SRRM1-203ENST00000447431 PPP1R15AO75807 674 aaPredicted RBP6.57□□□□□ -1.36
SRRM1-203ENST00000447431 RGL2O15211 777 aa6.57□□□□□ -1.36
SRRM1-203ENST00000447431 HIRIP3Q9BW71 556 aaPredicted RBP6.57□□□□□ -1.36
SRRM1-203ENST00000447431 SETD5Q9C0A6 1442 aa6.56□□□□□ -1.36
SRRM1-203ENST00000447431 RAB3GAP2Q9H2M9 1393 aa6.56□□□□□ -1.36
SRRM1-203ENST00000447431 SPOCK2Q92563 424 aa6.55□□□□□ -1.36
SRRM1-203ENST00000447431 EIF4G2P78344 907 aaKnown RBP eCLIP6.55□□□□□ -1.36
SRRM1-203ENST00000447431 SIN3AQ96ST3 1273 aa6.55□□□□□ -1.36
SRRM1-203ENST00000447431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.55□□□□□ -1.366e-7■■■□□ 14.9
SRRM1-203ENST00000447431 TCERG1O14776 1098 aaKnown RBP6.54□□□□□ -1.36
SRRM1-203ENST00000447431 ARID3AQ99856 593 aa6.54□□□□□ -1.36
SRRM1-203ENST00000447431 LAS1LQ9Y4W2 734 aaKnown RBP6.54□□□□□ -1.36
SRRM1-203ENST00000447431 SAMD1Q6SPF0 538 aaPredicted RBP6.54□□□□□ -1.36
SRRM1-203ENST00000447431 CIZ1Q9ULV3 898 aaPredicted RBP6.53□□□□□ -1.36
SRRM1-203ENST00000447431 WIZO95785 1651 aa6.53□□□□□ -1.36
SRRM1-203ENST00000447431 GSE1Q14687 1217 aa6.52□□□□□ -1.37
SRRM1-203ENST00000447431 IL27Q8NEV9 243 aa6.52□□□□□ -1.37
SRRM1-203ENST00000447431 ZBED9Q6R2W3 1325 aa6.52□□□□□ -1.37
SRRM1-203ENST00000447431 PAK3O75914 559 aaPredicted RBP6.52□□□□□ -1.37
SRRM1-203ENST00000447431 NACADO15069 1562 aa6.51□□□□□ -1.37
SRRM1-203ENST00000447431 RRBP1Q9P2E9 1410 aaKnown RBP6.51□□□□□ -1.37
SRRM1-203ENST00000447431 KANK4Q5T7N3 995 aaPredicted RBP6.51□□□□□ -1.37
SRRM1-203ENST00000447431 TOP2AP11388 1531 aaKnown RBP6.51□□□□□ -1.37
SRRM1-203ENST00000447431 KIF21BO75037 1637 aa6.51□□□□□ -1.37
SRRM1-203ENST00000447431 RUSC2Q8N2Y8 1516 aa6.51□□□□□ -1.37
SRRM1-203ENST00000447431 POLR3GLQ9BT43 218 aa6.51□□□□□ -1.37
SRRM1-203ENST00000447431 PLCD3Q8N3E9 789 aa6.5□□□□□ -1.37
SRRM1-203ENST00000447431 PKNOX2Q96KN3 472 aa6.49□□□□□ -1.37
SRRM1-203ENST00000447431 C11orf95C9JLR9 678 aaPredicted RBP6.49□□□□□ -1.37
SRRM1-203ENST00000447431 MS4A1P11836 297 aa6.48□□□□□ -1.37
SRRM1-203ENST00000447431 L1TD1Q5T7N2 865 aaKnown RBP6.48□□□□□ -1.37
SRRM1-203ENST00000447431 TMC1Q8TDI8 760 aa6.48□□□□□ -1.37
SRRM1-203ENST00000447431 ZNF219Q9P2Y4 722 aaPredicted RBP6.48□□□□□ -1.37
SRRM1-203ENST00000447431 NUDCQ9Y266 331 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms