RNA–Protein interactions for RNA: ENST00000446425.2

UBXN2A-203, Transcript of UBX domain protein 2A, humanhuman

TSL 1 (best)

Gene UBXN2A, Length 2,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-203ENST00000446425 BIVM-ERCC5R4GMW8 1640 aa23.71■■□□□ 1.39
UBXN2A-203ENST00000446425 SETD5Q9C0A6 1442 aa23.71■■□□□ 1.39
UBXN2A-203ENST00000446425 ERICH6Q7L0X2 663 aa23.71■■□□□ 1.39
UBXN2A-203ENST00000446425 CDK11AQ9UQ88 783 aaPredicted RBP23.7■■□□□ 1.38
UBXN2A-203ENST00000446425 SIN3AQ96ST3 1273 aa23.62■■□□□ 1.37
UBXN2A-203ENST00000446425 MAP3K1Q13233 1512 aa23.61■■□□□ 1.37
UBXN2A-203ENST00000446425 ARHGAP35Q9NRY4 1499 aa23.61■■□□□ 1.37
UBXN2A-203ENST00000446425 ERICH6BQ5W0A0 696 aa23.59■■□□□ 1.37
UBXN2A-203ENST00000446425 ATAD2BQ9ULI0 1458 aa23.56■■□□□ 1.36
UBXN2A-203ENST00000446425 TIAM1Q13009 1591 aa23.53■■□□□ 1.36
UBXN2A-203ENST00000446425 HIRIP3Q9BW71 556 aaPredicted RBP23.5■■□□□ 1.35
UBXN2A-203ENST00000446425 BICRAQ9NZM4 1560 aa23.5■■□□□ 1.35
UBXN2A-203ENST00000446425 KIF27Q86VH2 1401 aa23.49■■□□□ 1.35
UBXN2A-203ENST00000446425 DEKP35659 375 aaKnown RBP23.49■■□□□ 1.35
UBXN2A-203ENST00000446425 PPP4R2Q9NY27 417 aa23.45■■□□□ 1.35
UBXN2A-203ENST00000446425 LRRC9Q6ZRR7 1453 aa23.45■■□□□ 1.34
UBXN2A-203ENST00000446425 HNRNPUQ00839 825 aaKnown RBP eCLIP23.44■■□□□ 1.34
UBXN2A-203ENST00000446425 PRKCSHP14314 528 aaPredicted RBP23.43■■□□□ 1.34
UBXN2A-203ENST00000446425 IRX6P78412 446 aaPredicted RBP23.41■■□□□ 1.34
UBXN2A-203ENST00000446425 PHLDB1Q86UU1 1377 aa23.41■■□□□ 1.34
UBXN2A-203ENST00000446425 PABPN1Q86U42 306 aaKnown RBP eCLIP23.38■■□□□ 1.33
UBXN2A-203ENST00000446425 FAM50AQ14320 339 aaKnown RBP23.37■■□□□ 1.33
UBXN2A-203ENST00000446425 CUX1P39880 1505 aa23.36■■□□□ 1.33
UBXN2A-203ENST00000446425 TONSLQ96HA7 1378 aa23.34■■□□□ 1.33
UBXN2A-203ENST00000446425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.31■■□□□ 1.323e-7■■■□□ 14.6
UBXN2A-203ENST00000446425 CFAP43Q8NDM7 1665 aa23.31■■□□□ 1.32
UBXN2A-203ENST00000446425 NOP58Q9Y2X3 529 aaKnown RBP23.3■■□□□ 1.32
UBXN2A-203ENST00000446425 FHAD1B1AJZ9 1412 aa23.28■■□□□ 1.32
UBXN2A-203ENST00000446425 B4GALNT3Q6L9W6 998 aa23.19■■□□□ 1.3
UBXN2A-203ENST00000446425 UACAQ9BZF9 1416 aa23.17■■□□□ 1.3
UBXN2A-203ENST00000446425 IGF1RP08069 1367 aa23.16■■□□□ 1.3
UBXN2A-203ENST00000446425 CCDC18Q5T9S5 1454 aa23.15■■□□□ 1.3
UBXN2A-203ENST00000446425 NBR1Q14596 966 aa23.15■■□□□ 1.3
UBXN2A-203ENST00000446425 PCF11O94913 1555 aaKnown RBP23.14■■□□□ 1.3
UBXN2A-203ENST00000446425 PAK3O75914 559 aaPredicted RBP23.14■■□□□ 1.3
UBXN2A-203ENST00000446425 KDM5BQ9UGL1 1544 aa23.14■■□□□ 1.3
UBXN2A-203ENST00000446425 WASHC2AQ641Q2 1341 aa23.13■■□□□ 1.29
UBXN2A-203ENST00000446425 ZBED9Q6R2W3 1325 aa23.13■■□□□ 1.29
UBXN2A-203ENST00000446425 NCOA2Q15596 1464 aa23.12■■□□□ 1.29
UBXN2A-203ENST00000446425 HFM1A2PYH4 1435 aa23.09■■□□□ 1.29
UBXN2A-203ENST00000446425 CNTLNQ9NXG0 1405 aa23.09■■□□□ 1.29
UBXN2A-203ENST00000446425 CARMIL1Q5VZK9 1371 aa23.07■■□□□ 1.28
UBXN2A-203ENST00000446425 HSPA5P11021 654 aaKnown RBP23.07■■□□□ 1.28
UBXN2A-203ENST00000446425 IPO9Q96P70 1041 aaKnown RBP23.07■■□□□ 1.28
UBXN2A-203ENST00000446425 PTPN23Q9H3S7 1636 aa23.07■■□□□ 1.28
UBXN2A-203ENST00000446425 CCDC184Q52MB2 194 aa23.06■■□□□ 1.28
UBXN2A-203ENST00000446425 FYCO1Q9BQS8 1478 aa23.06■■□□□ 1.28
UBXN2A-203ENST00000446425 FGD6Q6ZV73 1430 aa23.05■■□□□ 1.28
UBXN2A-203ENST00000446425 ANP32AP39687 249 aaKnown RBP23.04■■□□□ 1.28
UBXN2A-203ENST00000446425 RTL5Q5HYW3 569 aaPredicted RBP23.04■■□□□ 1.28
UBXN2A-203ENST00000446425 ANO8Q9HCE9 1232 aaPredicted RBP23.04■■□□□ 1.28
UBXN2A-203ENST00000446425 PRKRIP1Q9H875 184 aaPredicted RBP23.02■■□□□ 1.28
UBXN2A-203ENST00000446425 CFTRP13569 1480 aa23.02■■□□□ 1.27
UBXN2A-203ENST00000446425 AQRO60306 1485 aaKnown RBP eCLIP23.01■■□□□ 1.271e-6■■■■□ 26.1
UBXN2A-203ENST00000446425 EIF4G2P78344 907 aaKnown RBP eCLIP23■■□□□ 1.27
UBXN2A-203ENST00000446425 FAM9BQ8IZU0 186 aa23■■□□□ 1.27
UBXN2A-203ENST00000446425 CASKIN1Q8WXD9 1431 aa23■■□□□ 1.27
UBXN2A-203ENST00000446425 HMGXB3Q12766 1538 aa23■■□□□ 1.27
UBXN2A-203ENST00000446425 ZBTB47Q9UFB7 747 aaPredicted RBP22.99■■□□□ 1.27
UBXN2A-203ENST00000446425 MRS2Q9HD23 443 aa22.99■■□□□ 1.27
UBXN2A-203ENST00000446425 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
UBXN2A-203ENST00000446425 ATP1B4Q9UN42 357 aaPredicted RBP22.98■■□□□ 1.27
UBXN2A-203ENST00000446425 PTPRKQ15262 1439 aa22.97■■□□□ 1.27
UBXN2A-203ENST00000446425 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
UBXN2A-203ENST00000446425 NAIPQ13075 1403 aa22.97■■□□□ 1.27
UBXN2A-203ENST00000446425 SMG6Q86US8 1419 aaKnown RBP22.96■■□□□ 1.27
UBXN2A-203ENST00000446425 EFCAB5A4FU69 1503 aa22.94■■□□□ 1.26
UBXN2A-203ENST00000446425 NCOA1Q15788 1441 aa22.94■■□□□ 1.26
UBXN2A-203ENST00000446425 FMN1Q68DA7 1419 aa22.93■■□□□ 1.26
UBXN2A-203ENST00000446425 P3H3Q8IVL6 736 aa22.93■■□□□ 1.26
UBXN2A-203ENST00000446425 RNF123Q5XPI4 1314 aa22.92■■□□□ 1.26
UBXN2A-203ENST00000446425 CCDC7Q96M83 1385 aa22.92■■□□□ 1.26
UBXN2A-203ENST00000446425 PRDM2Q13029 1718 aa22.91■■□□□ 1.26
UBXN2A-203ENST00000446425 FHOD3Q2V2M9 1422 aa22.91■■□□□ 1.26
UBXN2A-203ENST00000446425 CCDC136Q96JN2 1154 aa22.9■■□□□ 1.26
UBXN2A-203ENST00000446425 SALL2Q9Y467 1007 aaPredicted RBP22.9■■□□□ 1.26
UBXN2A-203ENST00000446425 C11orf95C9JLR9 678 aaPredicted RBP22.86■■□□□ 1.25
UBXN2A-203ENST00000446425 NUDCQ9Y266 331 aa22.85■■□□□ 1.25
UBXN2A-203ENST00000446425 AKNAQ7Z591 1439 aa22.85■■□□□ 1.25
UBXN2A-203ENST00000446425 HECW1Q76N89 1606 aa22.84■■□□□ 1.25
UBXN2A-203ENST00000446425 ABCA5Q8WWZ7 1642 aa22.83■■□□□ 1.24
UBXN2A-203ENST00000446425 POLR1AO95602 1720 aaPredicted RBP22.82■■□□□ 1.24
UBXN2A-203ENST00000446425 IL27Q8NEV9 243 aa22.82■■□□□ 1.24
UBXN2A-203ENST00000446425 USP35Q9P2H5 1018 aa22.82■■□□□ 1.24
UBXN2A-203ENST00000446425 MTUS2Q5JR59 1369 aa22.81■■□□□ 1.24
UBXN2A-203ENST00000446425 MYOM3Q5VTT5 1437 aa22.8■■□□□ 1.24
UBXN2A-203ENST00000446425 DENND4BO75064 1496 aaPredicted RBP22.79■■□□□ 1.24
UBXN2A-203ENST00000446425 SNAPC4Q5SXM2 1469 aa22.77■■□□□ 1.24
UBXN2A-203ENST00000446425 GCC2Q8IWJ2 1684 aa22.77■■□□□ 1.24
UBXN2A-203ENST00000446425 L3MBTL2Q969R5 705 aa22.74■■□□□ 1.23
UBXN2A-203ENST00000446425 KIF7Q2M1P5 1343 aa22.73■■□□□ 1.23
UBXN2A-203ENST00000446425 SUPT6HQ7KZ85 1726 aaKnown RBP22.73■■□□□ 1.23
UBXN2A-203ENST00000446425 CTTNBP2Q8WZ74 1663 aa22.72■■□□□ 1.23
UBXN2A-203ENST00000446425 WASHC2CQ9Y4E1 1318 aa22.72■■□□□ 1.23
UBXN2A-203ENST00000446425 SPATA31E1Q6ZUB1 1445 aa22.71■■□□□ 1.23
UBXN2A-203ENST00000446425 TCERG1O14776 1098 aaKnown RBP22.69■■□□□ 1.22
UBXN2A-203ENST00000446425 NEFMP07197 916 aa22.69■■□□□ 1.22
UBXN2A-203ENST00000446425 LRRIQ1Q96JM4 1722 aa22.68■■□□□ 1.22
UBXN2A-203ENST00000446425 MPHOSPH9Q99550 1183 aa22.67■■□□□ 1.22
UBXN2A-203ENST00000446425 PPM1GO15355 546 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms