RNA–Protein interactions for RNA: ENST00000444131.2

TMED4-202, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 4

Gene TMED4, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-202ENST00000444131 CUL7Q14999 1698 aa32.59■■■□□ 2.81
TMED4-202ENST00000444131 IGF1RP08069 1367 aa32.58■■■□□ 2.81
TMED4-202ENST00000444131 KIAA0586Q9BVV6 1533 aa32.51■■■□□ 2.8
TMED4-202ENST00000444131 CARMIL1Q5VZK9 1371 aa32.38■■■□□ 2.77
TMED4-202ENST00000444131 NPM1P06748 294 aaKnown RBP eCLIP32.38■■■□□ 2.77
TMED4-202ENST00000444131 KIF13AQ9H1H9 1805 aa32.35■■■□□ 2.77
TMED4-202ENST00000444131 MAPKBP1O60336 1514 aa32.31■■■□□ 2.76
TMED4-202ENST00000444131 ADCY10Q96PN6 1610 aa32.28■■■□□ 2.76
TMED4-202ENST00000444131 ABCC10Q5T3U5 1492 aa32.25■■■□□ 2.75
TMED4-202ENST00000444131 CARMIL2Q6F5E8 1435 aa32.23■■■□□ 2.75
TMED4-202ENST00000444131 FAM69CQ0P6D2 419 aa32.19■■■□□ 2.74
TMED4-202ENST00000444131 IQGAP2Q13576 1575 aa32.19■■■□□ 2.74
TMED4-202ENST00000444131 PTPRGP23470 1445 aa32.18■■■□□ 2.74
TMED4-202ENST00000444131 AEBP2Q6ZN18 517 aaPredicted RBP32.17■■■□□ 2.74
TMED4-202ENST00000444131 DIP2BQ9P265 1576 aa32.15■■■□□ 2.74
TMED4-202ENST00000444131 TNIKQ9UKE5 1360 aa32.15■■■□□ 2.74
TMED4-202ENST00000444131 RAPGEF2Q9Y4G8 1499 aa32.1■■■□□ 2.73
TMED4-202ENST00000444131 ABCC2Q92887 1545 aa32.03■■■□□ 2.72
TMED4-202ENST00000444131 DISP1Q96F81 1524 aa32■■■□□ 2.71
TMED4-202ENST00000444131 UGGT2Q9NYU1 1516 aa32■■■□□ 2.71
TMED4-202ENST00000444131 TTBK1Q5TCY1 1321 aaPredicted RBP32■■■□□ 2.71
TMED4-202ENST00000444131 UHRF1BP1LA0JNW5 1464 aa31.99■■■□□ 2.71
TMED4-202ENST00000444131 UACAQ9BZF9 1416 aa31.95■■■□□ 2.71
TMED4-202ENST00000444131 PLB1Q6P1J6 1458 aa31.93■■■□□ 2.7
TMED4-202ENST00000444131 TSPOAP1O95153 1857 aa31.89■■■□□ 2.7
TMED4-202ENST00000444131 KDM6BO15054 1643 aa31.89■■■□□ 2.7
TMED4-202ENST00000444131 KIAA0556O60303 1618 aa31.89■■■□□ 2.7
TMED4-202ENST00000444131 ASXL2Q76L83 1435 aa31.88■■■□□ 2.69
TMED4-202ENST00000444131 CTTNBP2Q8WZ74 1663 aa31.86■■■□□ 2.69
TMED4-202ENST00000444131 GLI2P10070 1586 aa31.85■■■□□ 2.69
TMED4-202ENST00000444131 KDM5BQ9UGL1 1544 aa31.83■■■□□ 2.69
TMED4-202ENST00000444131 GOLGA3Q08378 1498 aa31.78■■■□□ 2.68
TMED4-202ENST00000444131 PRXQ9BXM0 1461 aa31.77■■■□□ 2.68
TMED4-202ENST00000444131 ZCCHC11Q5TAX3 1644 aaKnown RBP31.73■■■□□ 2.67
TMED4-202ENST00000444131 EPRSP07814 1512 aaKnown RBP31.7■■■□□ 2.67
TMED4-202ENST00000444131 PPRC1Q5VV67 1664 aaKnown RBP31.69■■■□□ 2.66
TMED4-202ENST00000444131 MAP3K4Q9Y6R4 1608 aa31.64■■■□□ 2.66
TMED4-202ENST00000444131 TEX14Q8IWB6 1497 aa31.61■■■□□ 2.65
TMED4-202ENST00000444131 WDR7Q9Y4E6 1490 aa31.6■■■□□ 2.65
TMED4-202ENST00000444131 ABCA8O94911 1581 aa31.59■■■□□ 2.65
TMED4-202ENST00000444131 FAM9AQ8IZU1 332 aaPredicted RBP31.58■■■□□ 2.65
TMED4-202ENST00000444131 CSRNP3Q8WYN3 585 aa31.52■■■□□ 2.64
TMED4-202ENST00000444131 KDM4FA0A1W2PPD8 638 aa31.48■■■□□ 2.63
TMED4-202ENST00000444131 EEA1Q15075 1411 aa31.48■■■□□ 2.63
TMED4-202ENST00000444131 CFAP43Q8NDM7 1665 aa31.45■■■□□ 2.63
TMED4-202ENST00000444131 COL17A1Q9UMD9 1497 aaPredicted RBP31.43■■■□□ 2.62
TMED4-202ENST00000444131 MAGI3Q5TCQ9 1506 aa31.4■■■□□ 2.62
TMED4-202ENST00000444131 CD109Q6YHK3 1445 aa31.4■■■□□ 2.62
TMED4-202ENST00000444131 SAMD9Q5K651 1589 aa31.39■■■□□ 2.62
TMED4-202ENST00000444131 KCNH8Q96L42 1107 aa31.37■■■□□ 2.61
TMED4-202ENST00000444131 P3H3Q8IVL6 736 aa31.34■■■□□ 2.61
TMED4-202ENST00000444131 ATP10BO94823 1461 aa31.31■■■□□ 2.6
TMED4-202ENST00000444131 RAPGEF6Q8TEU7 1601 aa31.27■■■□□ 2.6
TMED4-202ENST00000444131 ADGRL1O94910 1474 aa31.27■■■□□ 2.6
TMED4-202ENST00000444131 ARID3CA6NKF2 412 aa31.2■■■□□ 2.59
TMED4-202ENST00000444131 ABCA9Q8IUA7 1624 aa31.2■■■□□ 2.58
TMED4-202ENST00000444131 KIF21BO75037 1637 aa31.18■■■□□ 2.58
TMED4-202ENST00000444131 PHLDB1Q86UU1 1377 aa31.17■■■□□ 2.58
TMED4-202ENST00000444131 ARAP3Q8WWN8 1544 aa31.16■■■□□ 2.58
TMED4-202ENST00000444131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.13■■■□□ 2.57
TMED4-202ENST00000444131 HNRNPUL2Q1KMD3 747 aaKnown RBP31.13■■■□□ 2.57
TMED4-202ENST00000444131 EFCAB5A4FU69 1503 aa31.13■■■□□ 2.57
TMED4-202ENST00000444131 NUP153P49790 1475 aaKnown RBP31.12■■■□□ 2.57
TMED4-202ENST00000444131 FHOD3Q2V2M9 1422 aa31.11■■■□□ 2.57
TMED4-202ENST00000444131 RANGAP1P46060 587 aaPredicted RBP31.08■■■□□ 2.57
TMED4-202ENST00000444131 NEO1Q92859 1461 aa31.06■■■□□ 2.56
TMED4-202ENST00000444131 PLEKHD1A6NEE1 506 aa31■■■□□ 2.55
TMED4-202ENST00000444131 UBTFP17480 764 aaKnown RBP30.9■■■□□ 2.54
TMED4-202ENST00000444131 CHIC1Q5VXU3 224 aa30.9■■■□□ 2.54
TMED4-202ENST00000444131 RAPGEF3O95398 923 aa30.88■■■□□ 2.53
TMED4-202ENST00000444131 CFAP74Q9C0B2 1584 aa30.88■■■□□ 2.53
TMED4-202ENST00000444131 FMN1Q68DA7 1419 aa30.85■■■□□ 2.53
TMED4-202ENST00000444131 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.84■■■□□ 2.532e-7■■■■□ 26.2
TMED4-202ENST00000444131 HECW2Q9P2P5 1572 aa30.83■■■□□ 2.53
TMED4-202ENST00000444131 FRMPD1Q5SYB0 1578 aa30.83■■■□□ 2.53
TMED4-202ENST00000444131 FANCAO15360 1455 aa30.82■■■□□ 2.52
TMED4-202ENST00000444131 DENND4BO75064 1496 aaPredicted RBP30.81■■■□□ 2.52
TMED4-202ENST00000444131 AKNAQ7Z591 1439 aa30.81■■■□□ 2.52
TMED4-202ENST00000444131 HECW1Q76N89 1606 aa30.79■■■□□ 2.52
TMED4-202ENST00000444131 CDK13Q14004 1512 aaKnown RBP30.78■■■□□ 2.52
TMED4-202ENST00000444131 ARHGAP35Q9NRY4 1499 aa30.77■■■□□ 2.52
TMED4-202ENST00000444131 TTC37Q6PGP7 1564 aa30.77■■■□□ 2.52
TMED4-202ENST00000444131 RICTORQ6R327 1708 aa30.76■■■□□ 2.52
TMED4-202ENST00000444131 ADAMTSL3P82987 1691 aa30.75■■■□□ 2.51
TMED4-202ENST00000444131 EHMT2Q96KQ7 1210 aa30.73■■■□□ 2.51
TMED4-202ENST00000444131 CDK11AQ9UQ88 783 aaPredicted RBP30.73■■■□□ 2.51
TMED4-202ENST00000444131 ARHGEF40Q8TER5 1519 aa30.72■■■□□ 2.51
TMED4-202ENST00000444131 BCORL1Q5H9F3 1711 aa30.7■■■□□ 2.5
TMED4-202ENST00000444131 ATP1B4Q9UN42 357 aaPredicted RBP30.69■■■□□ 2.5
TMED4-202ENST00000444131 ARID4BQ4LE39 1312 aaPredicted RBP30.69■■■□□ 2.5
TMED4-202ENST00000444131 ZMYM4Q5VZL5 1548 aa30.68■■■□□ 2.5
TMED4-202ENST00000444131 PLCH2O75038 1416 aa30.68■■■□□ 2.5
TMED4-202ENST00000444131 PTPRMP28827 1452 aa30.67■■■□□ 2.5
TMED4-202ENST00000444131 MAGI2Q86UL8 1455 aa30.64■■■□□ 2.5
TMED4-202ENST00000444131 MYO5CQ9NQX4 1742 aa30.62■■■□□ 2.49
TMED4-202ENST00000444131 ZFYVE16Q7Z3T8 1539 aa30.6■■■□□ 2.49
TMED4-202ENST00000444131 KIF14Q15058 1648 aa30.59■■■□□ 2.49
TMED4-202ENST00000444131 MADDQ8WXG6 1647 aa30.59■■■□□ 2.49
TMED4-202ENST00000444131 POGZQ7Z3K3 1410 aa30.58■■■□□ 2.49
TMED4-202ENST00000444131 SCAPERQ9BY12 1400 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms