RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 RUSC2Q8N2Y8 1516 aa32.21■■■□□ 2.75
ATPAF2-201ENST00000444058 KIAA0586Q9BVV6 1533 aa32.16■■■□□ 2.74
ATPAF2-201ENST00000444058 PRG4Q92954 1404 aaPredicted RBP32.16■■■□□ 2.74
ATPAF2-201ENST00000444058 TRHP20396 242 aaPredicted RBP32■■■□□ 2.71
ATPAF2-201ENST00000444058 RAPGEF2Q9Y4G8 1499 aa31.99■■■□□ 2.71
ATPAF2-201ENST00000444058 IQGAP2Q13576 1575 aa31.88■■■□□ 2.69
ATPAF2-201ENST00000444058 CARMIL2Q6F5E8 1435 aa31.83■■■□□ 2.69
ATPAF2-201ENST00000444058 PRXQ9BXM0 1461 aa31.81■■■□□ 2.68
ATPAF2-201ENST00000444058 PTPRGP23470 1445 aa31.75■■■□□ 2.67
ATPAF2-201ENST00000444058 TNIKQ9UKE5 1360 aa31.74■■■□□ 2.67
ATPAF2-201ENST00000444058 UGGT2Q9NYU1 1516 aa31.73■■■□□ 2.67
ATPAF2-201ENST00000444058 NPM1P06748 294 aaKnown RBP eCLIP31.7■■■□□ 2.67
ATPAF2-201ENST00000444058 DISP1Q96F81 1524 aa31.7■■■□□ 2.66
ATPAF2-201ENST00000444058 EEA1Q15075 1411 aa31.69■■■□□ 2.66
ATPAF2-201ENST00000444058 CSRNP3Q8WYN3 585 aa31.69■■■□□ 2.66
ATPAF2-201ENST00000444058 ADCY10Q96PN6 1610 aa31.67■■■□□ 2.66
ATPAF2-201ENST00000444058 CTTNBP2Q8WZ74 1663 aa31.63■■■□□ 2.65
ATPAF2-201ENST00000444058 MAPKBP1O60336 1514 aa31.62■■■□□ 2.65
ATPAF2-201ENST00000444058 KIAA0556O60303 1618 aa31.57■■■□□ 2.64
ATPAF2-201ENST00000444058 UHRF1BP1LA0JNW5 1464 aa31.55■■■□□ 2.64
ATPAF2-201ENST00000444058 GOLGA3Q08378 1498 aa31.54■■■□□ 2.64
ATPAF2-201ENST00000444058 TTBK1Q5TCY1 1321 aaPredicted RBP31.53■■■□□ 2.64
ATPAF2-201ENST00000444058 UACAQ9BZF9 1416 aa31.53■■■□□ 2.64
ATPAF2-201ENST00000444058 CHIC1Q5VXU3 224 aa31.52■■■□□ 2.64
ATPAF2-201ENST00000444058 ABCC10Q5T3U5 1492 aa31.52■■■□□ 2.64
ATPAF2-201ENST00000444058 ABCC2Q92887 1545 aa31.51■■■□□ 2.63
ATPAF2-201ENST00000444058 KIF13AQ9H1H9 1805 aa31.47■■■□□ 2.63
ATPAF2-201ENST00000444058 FAM69CQ0P6D2 419 aa31.43■■■□□ 2.62
ATPAF2-201ENST00000444058 DIP2BQ9P265 1576 aa31.4■■■□□ 2.62
ATPAF2-201ENST00000444058 KDM5BQ9UGL1 1544 aa31.39■■■□□ 2.61
ATPAF2-201ENST00000444058 FAM9AQ8IZU1 332 aaPredicted RBP31.38■■■□□ 2.61
ATPAF2-201ENST00000444058 PLB1Q6P1J6 1458 aa31.35■■■□□ 2.61
ATPAF2-201ENST00000444058 KIF21BO75037 1637 aa31.33■■■□□ 2.61
ATPAF2-201ENST00000444058 ASXL2Q76L83 1435 aa31.32■■■□□ 2.61
ATPAF2-201ENST00000444058 ABCA8O94911 1581 aa31.27■■■□□ 2.6
ATPAF2-201ENST00000444058 SAMD9Q5K651 1589 aa31.26■■■□□ 2.59
ATPAF2-201ENST00000444058 ZCCHC11Q5TAX3 1644 aaKnown RBP31.23■■■□□ 2.59
ATPAF2-201ENST00000444058 GLI2P10070 1586 aa31.22■■■□□ 2.59
ATPAF2-201ENST00000444058 P3H3Q8IVL6 736 aa31.18■■■□□ 2.58
ATPAF2-201ENST00000444058 EPRSP07814 1512 aaKnown RBP31.15■■■□□ 2.58
ATPAF2-201ENST00000444058 WDR7Q9Y4E6 1490 aa31.12■■■□□ 2.57
ATPAF2-201ENST00000444058 EFCAB5A4FU69 1503 aa31.08■■■□□ 2.57
ATPAF2-201ENST00000444058 UBTFP17480 764 aaKnown RBP31.06■■■□□ 2.56
ATPAF2-201ENST00000444058 TSPOAP1O95153 1857 aa31.05■■■□□ 2.56
ATPAF2-201ENST00000444058 RANGAP1P46060 587 aaPredicted RBP31.04■■■□□ 2.56
ATPAF2-201ENST00000444058 FHOD3Q2V2M9 1422 aa31.02■■■□□ 2.56
ATPAF2-201ENST00000444058 MAP3K4Q9Y6R4 1608 aa31.02■■■□□ 2.56
ATPAF2-201ENST00000444058 ATP10BO94823 1461 aa31.01■■■□□ 2.56
ATPAF2-201ENST00000444058 RAPGEF6Q8TEU7 1601 aa31.01■■■□□ 2.55
ATPAF2-201ENST00000444058 KDM6BO15054 1643 aa30.98■■■□□ 2.55
ATPAF2-201ENST00000444058 PPRC1Q5VV67 1664 aaKnown RBP30.98■■■□□ 2.55
ATPAF2-201ENST00000444058 TEX14Q8IWB6 1497 aa30.95■■■□□ 2.54
ATPAF2-201ENST00000444058 NUP153P49790 1475 aaKnown RBP30.93■■■□□ 2.54
ATPAF2-201ENST00000444058 EHMT2Q96KQ7 1210 aa30.92■■■□□ 2.54
ATPAF2-201ENST00000444058 KCNH8Q96L42 1107 aa30.92■■■□□ 2.54
ATPAF2-201ENST00000444058 ARID3CA6NKF2 412 aa30.9■■■□□ 2.54
ATPAF2-201ENST00000444058 CD109Q6YHK3 1445 aa30.88■■■□□ 2.53
ATPAF2-201ENST00000444058 CFAP43Q8NDM7 1665 aa30.87■■■□□ 2.53
ATPAF2-201ENST00000444058 MAGI3Q5TCQ9 1506 aa30.87■■■□□ 2.53
ATPAF2-201ENST00000444058 ARHGAP35Q9NRY4 1499 aa30.84■■■□□ 2.53
ATPAF2-201ENST00000444058 FMN1Q68DA7 1419 aa30.82■■■□□ 2.52
ATPAF2-201ENST00000444058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.82■■■□□ 2.52
ATPAF2-201ENST00000444058 HNRNPUL2Q1KMD3 747 aaKnown RBP30.82■■■□□ 2.52
ATPAF2-201ENST00000444058 COL17A1Q9UMD9 1497 aaPredicted RBP30.76■■■□□ 2.52
ATPAF2-201ENST00000444058 PLEKHD1A6NEE1 506 aa30.75■■■□□ 2.51
ATPAF2-201ENST00000444058 ABCA9Q8IUA7 1624 aa30.75■■■□□ 2.51
ATPAF2-201ENST00000444058 PHLDB1Q86UU1 1377 aa30.67■■■□□ 2.5
ATPAF2-201ENST00000444058 AEBP2Q6ZN18 517 aaPredicted RBP30.66■■■□□ 2.5
ATPAF2-201ENST00000444058 HECW1Q76N89 1606 aa30.65■■■□□ 2.5
ATPAF2-201ENST00000444058 ARAP3Q8WWN8 1544 aa30.62■■■□□ 2.49
ATPAF2-201ENST00000444058 CDK13Q14004 1512 aaKnown RBP30.61■■■□□ 2.49
ATPAF2-201ENST00000444058 NEO1Q92859 1461 aa30.58■■■□□ 2.49
ATPAF2-201ENST00000444058 ATP1B4Q9UN42 357 aaPredicted RBP30.58■■■□□ 2.49
ATPAF2-201ENST00000444058 CDK11AQ9UQ88 783 aaPredicted RBP30.58■■■□□ 2.49
ATPAF2-201ENST00000444058 CLIP1P30622 1438 aa30.55■■■□□ 2.48
ATPAF2-201ENST00000444058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.53■■■□□ 2.48
ATPAF2-201ENST00000444058 CASKIN1Q8WXD9 1431 aa30.53■■■□□ 2.48
ATPAF2-201ENST00000444058 KDM4FA0A1W2PPD8 638 aa30.46■■■□□ 2.47
ATPAF2-201ENST00000444058 TTC37Q6PGP7 1564 aa30.45■■■□□ 2.46
ATPAF2-201ENST00000444058 CCDC18Q5T9S5 1454 aa30.44■■■□□ 2.46
ATPAF2-201ENST00000444058 TROQ12816 1431 aaPredicted RBP30.44■■■□□ 2.46
ATPAF2-201ENST00000444058 PCF11O94913 1555 aaKnown RBP30.43■■■□□ 2.46
ATPAF2-201ENST00000444058 FANCAO15360 1455 aa30.43■■■□□ 2.46
ATPAF2-201ENST00000444058 FYCO1Q9BQS8 1478 aa30.42■■■□□ 2.46
ATPAF2-201ENST00000444058 CFAP74Q9C0B2 1584 aa30.41■■■□□ 2.46
ATPAF2-201ENST00000444058 PLCH2O75038 1416 aa30.4■■■□□ 2.46
ATPAF2-201ENST00000444058 LRRIQ1Q96JM4 1722 aa30.39■■■□□ 2.46
ATPAF2-201ENST00000444058 AKNAQ7Z591 1439 aa30.39■■■□□ 2.45
ATPAF2-201ENST00000444058 RAPGEF3O95398 923 aa30.37■■■□□ 2.45
ATPAF2-201ENST00000444058 KIF14Q15058 1648 aa30.36■■■□□ 2.45
ATPAF2-201ENST00000444058 DENND4BO75064 1496 aaPredicted RBP30.33■■■□□ 2.45
ATPAF2-201ENST00000444058 ADGRL1O94910 1474 aa30.33■■■□□ 2.45
ATPAF2-201ENST00000444058 CEP162Q5TB80 1403 aa30.31■■■□□ 2.44
ATPAF2-201ENST00000444058 FRMPD1Q5SYB0 1578 aa30.3■■■□□ 2.44
ATPAF2-201ENST00000444058 EFCAB2Q5VUJ9 269 aa30.29■■■□□ 2.44
ATPAF2-201ENST00000444058 MYO5CQ9NQX4 1742 aa30.27■■■□□ 2.44
ATPAF2-201ENST00000444058 RICTORQ6R327 1708 aa30.24■■■□□ 2.43
ATPAF2-201ENST00000444058 SCAPERQ9BY12 1400 aa30.21■■■□□ 2.43
ATPAF2-201ENST00000444058 ZMYM4Q5VZL5 1548 aa30.2■■■□□ 2.42
ATPAF2-201ENST00000444058 LOC105371045A0A1W2PR82 267 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms