RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 HIRIP3Q9BW71 556 aaPredicted RBP20.25■□□□□ 0.83
MCF2L-218ENST00000442625 IGF1RP08069 1367 aa20.24■□□□□ 0.83
MCF2L-218ENST00000442625 DDX10Q13206 875 aaKnown RBP20.24■□□□□ 0.83
MCF2L-218ENST00000442625 P3H3Q8IVL6 736 aa20.22■□□□□ 0.83
MCF2L-218ENST00000442625 FKBP8Q14318 412 aa20.21■□□□□ 0.83
MCF2L-218ENST00000442625 SIN3AQ96ST3 1273 aa20.2■□□□□ 0.82
MCF2L-218ENST00000442625 ATP1B4Q9UN42 357 aaPredicted RBP20.2■□□□□ 0.82
MCF2L-218ENST00000442625 FAM50AQ14320 339 aaKnown RBP20.19■□□□□ 0.82
MCF2L-218ENST00000442625 ANP32EQ9BTT0 268 aa20.17■□□□□ 0.82
MCF2L-218ENST00000442625 MAPKBP1O60336 1514 aa20.17■□□□□ 0.82
MCF2L-218ENST00000442625 CARMIL1Q5VZK9 1371 aa20.17■□□□□ 0.82
MCF2L-218ENST00000442625 EIF5BO60841 1220 aaKnown RBP20.16■□□□□ 0.82
MCF2L-218ENST00000442625 PHLDB1Q86UU1 1377 aa20.16■□□□□ 0.82
MCF2L-218ENST00000442625 TIAM1Q13009 1591 aa20.15■□□□□ 0.82
MCF2L-218ENST00000442625 SETD5Q9C0A6 1442 aa20.12■□□□□ 0.81
MCF2L-218ENST00000442625 TRIM52Q96A61 297 aa20.11■□□□□ 0.81
MCF2L-218ENST00000442625 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
MCF2L-218ENST00000442625 LRRC9Q6ZRR7 1453 aa20.11■□□□□ 0.81
MCF2L-218ENST00000442625 CADPSQ9ULU8 1353 aa20.07■□□□□ 0.8
MCF2L-218ENST00000442625 WDR97A6NE52 1622 aa20.06■□□□□ 0.8
MCF2L-218ENST00000442625 MAP3K1Q13233 1512 aa20.02■□□□□ 0.8
MCF2L-218ENST00000442625 FHOD3Q2V2M9 1422 aa20.02■□□□□ 0.79
MCF2L-218ENST00000442625 PCF11O94913 1555 aaKnown RBP20■□□□□ 0.79
MCF2L-218ENST00000442625 FHAD1B1AJZ9 1412 aa19.99■□□□□ 0.79
MCF2L-218ENST00000442625 PPP1R15AO75807 674 aaPredicted RBP19.99■□□□□ 0.79
MCF2L-218ENST00000442625 PRDM2Q13029 1718 aa19.97■□□□□ 0.79
MCF2L-218ENST00000442625 RBM19Q9Y4C8 960 aaKnown RBP19.96■□□□□ 0.79
MCF2L-218ENST00000442625 RAD54L2Q9Y4B4 1467 aa19.96■□□□□ 0.79
MCF2L-218ENST00000442625 NEFLP07196 543 aa19.93■□□□□ 0.78
MCF2L-218ENST00000442625 FANCD2Q9BXW9 1451 aa19.9■□□□□ 0.78
MCF2L-218ENST00000442625 CFAP43Q8NDM7 1665 aa19.9■□□□□ 0.78
MCF2L-218ENST00000442625 IRX6P78412 446 aaPredicted RBP19.89■□□□□ 0.77
MCF2L-218ENST00000442625 ANP32CO43423 234 aa19.88■□□□□ 0.77
MCF2L-218ENST00000442625 FYCO1Q9BQS8 1478 aa19.83■□□□□ 0.77
MCF2L-218ENST00000442625 CASKIN1Q8WXD9 1431 aa19.83■□□□□ 0.77
MCF2L-218ENST00000442625 POLA1P09884 1462 aaPredicted RBP19.82■□□□□ 0.76
MCF2L-218ENST00000442625 TIMELESSQ9UNS1 1208 aa19.81■□□□□ 0.76
MCF2L-218ENST00000442625 MSH5O43196 834 aa19.8■□□□□ 0.76
MCF2L-218ENST00000442625 TONSLQ96HA7 1378 aa19.8■□□□□ 0.76
MCF2L-218ENST00000442625 NESP48681 1621 aa19.79■□□□□ 0.76
MCF2L-218ENST00000442625 FGD6Q6ZV73 1430 aa19.79■□□□□ 0.76
MCF2L-218ENST00000442625 ABCA10Q8WWZ4 1543 aa19.79■□□□□ 0.76
MCF2L-218ENST00000442625 CC2D2AQ9P2K1 1620 aa19.78■□□□□ 0.76
MCF2L-218ENST00000442625 PTPRKQ15262 1439 aa19.78■□□□□ 0.76
MCF2L-218ENST00000442625 MTUS2Q5JR59 1369 aa19.78■□□□□ 0.76
MCF2L-218ENST00000442625 TOPBP1Q92547 1522 aa19.78■□□□□ 0.76
MCF2L-218ENST00000442625 CCER2I3L3R5 266 aa19.77■□□□□ 0.76
MCF2L-218ENST00000442625 DNMBPQ6XZF7 1577 aa19.76■□□□□ 0.75
MCF2L-218ENST00000442625 CCDC18Q5T9S5 1454 aa19.76■□□□□ 0.75
MCF2L-218ENST00000442625 EFCAB5A4FU69 1503 aa19.75■□□□□ 0.75
MCF2L-218ENST00000442625 HNRNPUQ00839 825 aaKnown RBP eCLIP19.74■□□□□ 0.75
MCF2L-218ENST00000442625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.74■□□□□ 0.75
MCF2L-218ENST00000442625 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.75
MCF2L-218ENST00000442625 FMN1Q68DA7 1419 aa19.73■□□□□ 0.75
MCF2L-218ENST00000442625 TDRD9Q8NDG6 1382 aaKnown RBP19.72■□□□□ 0.75
MCF2L-218ENST00000442625 SNAPC4Q5SXM2 1469 aa19.71■□□□□ 0.75
MCF2L-218ENST00000442625 PLEKHG5O94827 1062 aa19.69■□□□□ 0.74
MCF2L-218ENST00000442625 HFM1A2PYH4 1435 aa19.68■□□□□ 0.74
MCF2L-218ENST00000442625 UACAQ9BZF9 1416 aa19.68■□□□□ 0.74
MCF2L-218ENST00000442625 CHIC2Q9UKJ5 165 aa19.67■□□□□ 0.74
MCF2L-218ENST00000442625 CTTNBP2Q8WZ74 1663 aa19.67■□□□□ 0.74
MCF2L-218ENST00000442625 RRP7BPQ9NSQ0 103 aa19.67■□□□□ 0.74
MCF2L-218ENST00000442625 CUL7Q14999 1698 aa19.66■□□□□ 0.74
MCF2L-218ENST00000442625 NCOA2Q15596 1464 aa19.66■□□□□ 0.74
MCF2L-218ENST00000442625 NAIPQ13075 1403 aa19.66■□□□□ 0.74
MCF2L-218ENST00000442625 PTPN23Q9H3S7 1636 aa19.65■□□□□ 0.74
MCF2L-218ENST00000442625 CCDC184Q52MB2 194 aa19.63■□□□□ 0.73
MCF2L-218ENST00000442625 MYOM3Q5VTT5 1437 aa19.63■□□□□ 0.73
MCF2L-218ENST00000442625 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
MCF2L-218ENST00000442625 LRRIQ1Q96JM4 1722 aa19.61■□□□□ 0.73
MCF2L-218ENST00000442625 ARID3CA6NKF2 412 aa19.6■□□□□ 0.73
MCF2L-218ENST00000442625 GRIN2BQ13224 1484 aa19.58■□□□□ 0.72
MCF2L-218ENST00000442625 CDK11AQ9UQ88 783 aaPredicted RBP19.58■□□□□ 0.72
MCF2L-218ENST00000442625 WASHC2AQ641Q2 1341 aa19.56■□□□□ 0.72
MCF2L-218ENST00000442625 GAPVD1Q14C86 1478 aa19.56■□□□□ 0.72
MCF2L-218ENST00000442625 HSPA5P11021 654 aaKnown RBP19.55■□□□□ 0.72
MCF2L-218ENST00000442625 SAMD9Q5K651 1589 aa19.55■□□□□ 0.72
MCF2L-218ENST00000442625 KDM5BQ9UGL1 1544 aa19.55■□□□□ 0.72
MCF2L-218ENST00000442625 FOXD1Q16676 465 aa19.54■□□□□ 0.72
MCF2L-218ENST00000442625 MAGI3Q5TCQ9 1506 aa19.54■□□□□ 0.72
MCF2L-218ENST00000442625 FAM9BQ8IZU0 186 aa19.53■□□□□ 0.72
MCF2L-218ENST00000442625 UBE2Q2Q8WVN8 375 aa19.53■□□□□ 0.72
MCF2L-218ENST00000442625 CNGB1Q14028 1251 aaPredicted RBP19.52■□□□□ 0.72
MCF2L-218ENST00000442625 SUPT6HQ7KZ85 1726 aaKnown RBP19.51■□□□□ 0.71
MCF2L-218ENST00000442625 DNAJC5BQ9UF47 199 aa19.51■□□□□ 0.71
MCF2L-218ENST00000442625 B4GALNT3Q6L9W6 998 aa19.51■□□□□ 0.71
MCF2L-218ENST00000442625 EHBP1L1Q8N3D4 1523 aa19.5■□□□□ 0.71
MCF2L-218ENST00000442625 ABCA5Q8WWZ7 1642 aa19.49■□□□□ 0.71
MCF2L-218ENST00000442625 SENP3-EIF4A1A0A087X0R7 540 aa19.48■□□□□ 0.71
MCF2L-218ENST00000442625 DENND4BO75064 1496 aaPredicted RBP19.48■□□□□ 0.71
MCF2L-218ENST00000442625 UGGT2Q9NYU1 1516 aa19.48■□□□□ 0.71
MCF2L-218ENST00000442625 C11orf95C9JLR9 678 aaPredicted RBP19.48■□□□□ 0.71
MCF2L-218ENST00000442625 FANCIQ9NVI1 1328 aa19.47■□□□□ 0.71
MCF2L-218ENST00000442625 KDM6BO15054 1643 aa19.46■□□□□ 0.71
MCF2L-218ENST00000442625 EIF4G2P78344 907 aaKnown RBP eCLIP19.45■□□□□ 0.7
MCF2L-218ENST00000442625 L3MBTL2Q969R5 705 aa19.45■□□□□ 0.7
MCF2L-218ENST00000442625 MPHOSPH9Q99550 1183 aa19.45■□□□□ 0.7
MCF2L-218ENST00000442625 ARHGEF11O15085 1522 aa19.42■□□□□ 0.7
MCF2L-218ENST00000442625 THOC2Q8NI27 1593 aaKnown RBP19.42■□□□□ 0.7
MCF2L-218ENST00000442625 LAMC3Q9Y6N6 1575 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms