RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 RUSC2Q8N2Y8 1516 aa35.03■■■■□ 3.2
UBE2F-215ENST00000441728 KIF27Q86VH2 1401 aa34.94■■■■□ 3.18
UBE2F-215ENST00000441728 KIF13AQ9H1H9 1805 aa34.92■■■■□ 3.18
UBE2F-215ENST00000441728 CUL7Q14999 1698 aa34.88■■■■□ 3.17
UBE2F-215ENST00000441728 FAM69CQ0P6D2 419 aa34.87■■■■□ 3.17
UBE2F-215ENST00000441728 KIAA0586Q9BVV6 1533 aa34.86■■■■□ 3.17
UBE2F-215ENST00000441728 IGF1RP08069 1367 aa34.85■■■■□ 3.17
UBE2F-215ENST00000441728 ABCC10Q5T3U5 1492 aa34.79■■■■□ 3.16
UBE2F-215ENST00000441728 MAPKBP1O60336 1514 aa34.78■■■■□ 3.16
UBE2F-215ENST00000441728 ADCY10Q96PN6 1610 aa34.76■■■■□ 3.15
UBE2F-215ENST00000441728 TTBK1Q5TCY1 1321 aaPredicted RBP34.7■■■■□ 3.15
UBE2F-215ENST00000441728 CARMIL1Q5VZK9 1371 aa34.69■■■■□ 3.14
UBE2F-215ENST00000441728 DIP2BQ9P265 1576 aa34.69■■■■□ 3.14
UBE2F-215ENST00000441728 PTPRGP23470 1445 aa34.64■■■■□ 3.14
UBE2F-215ENST00000441728 CARMIL2Q6F5E8 1435 aa34.64■■■■□ 3.14
UBE2F-215ENST00000441728 TNIKQ9UKE5 1360 aa34.55■■■■□ 3.12
UBE2F-215ENST00000441728 KDM6BO15054 1643 aa34.54■■■■□ 3.12
UBE2F-215ENST00000441728 TSPOAP1O95153 1857 aa34.53■■■■□ 3.12
UBE2F-215ENST00000441728 IQGAP2Q13576 1575 aa34.53■■■■□ 3.12
UBE2F-215ENST00000441728 ABCC2Q92887 1545 aa34.44■■■■□ 3.1
UBE2F-215ENST00000441728 PLB1Q6P1J6 1458 aa34.38■■■■□ 3.09
UBE2F-215ENST00000441728 ASXL2Q76L83 1435 aa34.36■■■■□ 3.09
UBE2F-215ENST00000441728 RAPGEF2Q9Y4G8 1499 aa34.35■■■■□ 3.09
UBE2F-215ENST00000441728 UACAQ9BZF9 1416 aa34.34■■■■□ 3.09
UBE2F-215ENST00000441728 UHRF1BP1LA0JNW5 1464 aa34.32■■■■□ 3.08
UBE2F-215ENST00000441728 DISP1Q96F81 1524 aa34.29■■■■□ 3.08
UBE2F-215ENST00000441728 GLI2P10070 1586 aa34.24■■■■□ 3.07
UBE2F-215ENST00000441728 UGGT2Q9NYU1 1516 aa34.24■■■■□ 3.07
UBE2F-215ENST00000441728 KDM4FA0A1W2PPD8 638 aa34.19■■■■□ 3.06
UBE2F-215ENST00000441728 KIAA0556O60303 1618 aa34.19■■■■□ 3.06
UBE2F-215ENST00000441728 KDM5BQ9UGL1 1544 aa34.16■■■■□ 3.06
UBE2F-215ENST00000441728 EPRSP07814 1512 aaKnown RBP34.13■■■■□ 3.05
UBE2F-215ENST00000441728 ZCCHC11Q5TAX3 1644 aaKnown RBP34.12■■■■□ 3.05
UBE2F-215ENST00000441728 PPRC1Q5VV67 1664 aaKnown RBP34.12■■■■□ 3.05
UBE2F-215ENST00000441728 TEX14Q8IWB6 1497 aa34.1■■■■□ 3.05
UBE2F-215ENST00000441728 CTTNBP2Q8WZ74 1663 aa34.08■■■■□ 3.05
UBE2F-215ENST00000441728 GOLGA3Q08378 1498 aa34.07■■■■□ 3.04
UBE2F-215ENST00000441728 MAP3K4Q9Y6R4 1608 aa34.04■■■■□ 3.04
UBE2F-215ENST00000441728 FAM9AQ8IZU1 332 aaPredicted RBP34.01■■■■□ 3.03
UBE2F-215ENST00000441728 WDR7Q9Y4E6 1490 aa34■■■■□ 3.03
UBE2F-215ENST00000441728 ADGRL1O94910 1474 aa33.94■■■■□ 3.02
UBE2F-215ENST00000441728 COL17A1Q9UMD9 1497 aaPredicted RBP33.9■■■■□ 3.02
UBE2F-215ENST00000441728 KCNH8Q96L42 1107 aa33.9■■■■□ 3.02
UBE2F-215ENST00000441728 CD109Q6YHK3 1445 aa33.85■■■■□ 3.01
UBE2F-215ENST00000441728 ABCA8O94911 1581 aa33.85■■■■□ 3.01
UBE2F-215ENST00000441728 PRXQ9BXM0 1461 aa33.84■■■■□ 3.01
UBE2F-215ENST00000441728 CFAP43Q8NDM7 1665 aa33.81■■■■□ 3
UBE2F-215ENST00000441728 MAGI3Q5TCQ9 1506 aa33.77■■■■□ 3
UBE2F-215ENST00000441728 P3H3Q8IVL6 736 aa33.75■■■□□ 2.99
UBE2F-215ENST00000441728 ARID3CA6NKF2 412 aa33.73■■■□□ 2.99
UBE2F-215ENST00000441728 CSRNP3Q8WYN3 585 aa33.63■■■□□ 2.97
UBE2F-215ENST00000441728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.61■■■□□ 2.97
UBE2F-215ENST00000441728 HNRNPUL2Q1KMD3 747 aaKnown RBP33.61■■■□□ 2.97
UBE2F-215ENST00000441728 ATP10BO94823 1461 aa33.58■■■□□ 2.97
UBE2F-215ENST00000441728 HECW2Q9P2P5 1572 aa33.54■■■□□ 2.96
UBE2F-215ENST00000441728 RANGAP1P46060 587 aaPredicted RBP33.52■■■□□ 2.96
UBE2F-215ENST00000441728 SAMD9Q5K651 1589 aa33.51■■■□□ 2.95
UBE2F-215ENST00000441728 RAPGEF6Q8TEU7 1601 aa33.5■■■□□ 2.95
UBE2F-215ENST00000441728 PHLDB1Q86UU1 1377 aa33.49■■■□□ 2.95
UBE2F-215ENST00000441728 ARAP3Q8WWN8 1544 aa33.49■■■□□ 2.95
UBE2F-215ENST00000441728 KIF21BO75037 1637 aa33.49■■■□□ 2.95
UBE2F-215ENST00000441728 ABCA9Q8IUA7 1624 aa33.47■■■□□ 2.95
UBE2F-215ENST00000441728 EEA1Q15075 1411 aa33.46■■■□□ 2.95
UBE2F-215ENST00000441728 ILDR1Q86SU0 546 aaPredicted RBP33.46■■■□□ 2.95
UBE2F-215ENST00000441728 NEO1Q92859 1461 aa33.37■■■□□ 2.93
UBE2F-215ENST00000441728 RAPGEF3O95398 923 aa33.35■■■□□ 2.93
UBE2F-215ENST00000441728 FHOD3Q2V2M9 1422 aa33.35■■■□□ 2.93
UBE2F-215ENST00000441728 PLEKHD1A6NEE1 506 aa33.33■■■□□ 2.93
UBE2F-215ENST00000441728 NUP153P49790 1475 aaKnown RBP33.32■■■□□ 2.92
UBE2F-215ENST00000441728 ARID4BQ4LE39 1312 aaPredicted RBP33.3■■■□□ 2.92
UBE2F-215ENST00000441728 EFCAB5A4FU69 1503 aa33.22■■■□□ 2.91
UBE2F-215ENST00000441728 PTPRMP28827 1452 aa33.18■■■□□ 2.9
UBE2F-215ENST00000441728 DENND4BO75064 1496 aaPredicted RBP33.18■■■□□ 2.9
UBE2F-215ENST00000441728 CFAP74Q9C0B2 1584 aa33.17■■■□□ 2.9
UBE2F-215ENST00000441728 ADAMTSL3P82987 1691 aa33.17■■■□□ 2.9
UBE2F-215ENST00000441728 FRMPD1Q5SYB0 1578 aa33.15■■■□□ 2.9
UBE2F-215ENST00000441728 FANCAO15360 1455 aa33.13■■■□□ 2.89
UBE2F-215ENST00000441728 AKNAQ7Z591 1439 aa33.12■■■□□ 2.89
UBE2F-215ENST00000441728 BCORL1Q5H9F3 1711 aa33.11■■■□□ 2.89
UBE2F-215ENST00000441728 ATP1B4Q9UN42 357 aaPredicted RBP33.1■■■□□ 2.89
UBE2F-215ENST00000441728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.08■■■□□ 2.892e-6■■■□□ 16.6
UBE2F-215ENST00000441728 ARHGEF40Q8TER5 1519 aa33.08■■■□□ 2.89
UBE2F-215ENST00000441728 UBTFP17480 764 aaKnown RBP33.08■■■□□ 2.89
UBE2F-215ENST00000441728 EHMT2Q96KQ7 1210 aa33.08■■■□□ 2.89
UBE2F-215ENST00000441728 MADDQ8WXG6 1647 aa33.06■■■□□ 2.88
UBE2F-215ENST00000441728 RICTORQ6R327 1708 aa33.05■■■□□ 2.88
UBE2F-215ENST00000441728 TTC37Q6PGP7 1564 aa33.03■■■□□ 2.88
UBE2F-215ENST00000441728 POGZQ7Z3K3 1410 aa33.02■■■□□ 2.88
UBE2F-215ENST00000441728 CDK13Q14004 1512 aaKnown RBP33.02■■■□□ 2.88
UBE2F-215ENST00000441728 RIMS1Q86UR5 1692 aaKnown RBP32.97■■■□□ 2.87
UBE2F-215ENST00000441728 PLPPR3Q6T4P5 718 aa32.97■■■□□ 2.87
UBE2F-215ENST00000441728 ZFYVE16Q7Z3T8 1539 aa32.97■■■□□ 2.87
UBE2F-215ENST00000441728 FMN1Q68DA7 1419 aa32.96■■■□□ 2.87
UBE2F-215ENST00000441728 CDK11AQ9UQ88 783 aaPredicted RBP32.96■■■□□ 2.87
UBE2F-215ENST00000441728 PCF11O94913 1555 aaKnown RBP32.95■■■□□ 2.86
UBE2F-215ENST00000441728 ZMYM4Q5VZL5 1548 aa32.94■■■□□ 2.86
UBE2F-215ENST00000441728 HECW1Q76N89 1606 aa32.94■■■□□ 2.86
UBE2F-215ENST00000441728 MAGI2Q86UL8 1455 aa32.92■■■□□ 2.86
UBE2F-215ENST00000441728 PLCH2O75038 1416 aa32.9■■■□□ 2.86
UBE2F-215ENST00000441728 SCAPERQ9BY12 1400 aa32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms