RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 TNIKQ9UKE5 1360 aa8.81□□□□□ -1
CNOT1-202ENST00000441024 ZNF777Q9ULD5 760 aaPredicted RBP8.81□□□□□ -1
CNOT1-202ENST00000441024 CEP164Q9UPV0 1460 aa8.8□□□□□ -1
CNOT1-202ENST00000441024 CEP162Q5TB80 1403 aa8.8□□□□□ -1
CNOT1-202ENST00000441024 KIF27Q86VH2 1401 aa8.79□□□□□ -1
CNOT1-202ENST00000441024 MTUS2Q5JR59 1369 aa8.78□□□□□ -1
CNOT1-202ENST00000441024 ARID3CA6NKF2 412 aa8.78□□□□□ -1
CNOT1-202ENST00000441024 CUX2O14529 1486 aa8.76□□□□□ -1.01
CNOT1-202ENST00000441024 CTTNBP2Q8WZ74 1663 aa8.76□□□□□ -1.01
CNOT1-202ENST00000441024 NEFMP07197 916 aa8.76□□□□□ -1.01
CNOT1-202ENST00000441024 SHROOM2Q13796 1616 aa8.75□□□□□ -1.01
CNOT1-202ENST00000441024 NPM1P06748 294 aaKnown RBP eCLIP8.74□□□□□ -1.01
CNOT1-202ENST00000441024 ABCA10Q8WWZ4 1543 aa8.74□□□□□ -1.01
CNOT1-202ENST00000441024 ZBTB47Q9UFB7 747 aaPredicted RBP8.73□□□□□ -1.01
CNOT1-202ENST00000441024 NESP48681 1621 aa8.73□□□□□ -1.01
CNOT1-202ENST00000441024 TSPY4P0CV99 314 aa8.73□□□□□ -1.01
CNOT1-202ENST00000441024 TSPY10P0CW01 314 aa8.73□□□□□ -1.01
CNOT1-202ENST00000441024 BCANQ96GW7 911 aa8.73□□□□□ -1.01
CNOT1-202ENST00000441024 CHMP7Q8WUX9 453 aaPredicted RBP8.72□□□□□ -1.01
CNOT1-202ENST00000441024 ERICH3Q5RHP9 1530 aa8.72□□□□□ -1.01
CNOT1-202ENST00000441024 CUL7Q14999 1698 aa8.72□□□□□ -1.01
CNOT1-202ENST00000441024 TOPBP1Q92547 1522 aa8.72□□□□□ -1.01
CNOT1-202ENST00000441024 SAMD9Q5K651 1589 aa8.71□□□□□ -1.01
CNOT1-202ENST00000441024 DNAJC5BQ9UF47 199 aa8.71□□□□□ -1.01
CNOT1-202ENST00000441024 CANXP27824 592 aaKnown RBP8.71□□□□□ -1.02
CNOT1-202ENST00000441024 CADPSQ9ULU8 1353 aa8.7□□□□□ -1.02
CNOT1-202ENST00000441024 PRXQ9BXM0 1461 aa8.69□□□□□ -1.02
CNOT1-202ENST00000441024 CHIC2Q9UKJ5 165 aa8.68□□□□□ -1.02
CNOT1-202ENST00000441024 ESF1Q9H501 851 aaKnown RBP8.68□□□□□ -1.02
CNOT1-202ENST00000441024 DDX10Q13206 875 aaKnown RBP8.68□□□□□ -1.02
CNOT1-202ENST00000441024 ADAMTS12P58397 1594 aa8.67□□□□□ -1.02
CNOT1-202ENST00000441024 EIF4G3O43432 1585 aaKnown RBP8.66□□□□□ -1.02
CNOT1-202ENST00000441024 FHAD1B1AJZ9 1412 aa8.66□□□□□ -1.02
CNOT1-202ENST00000441024 PLEKHD1A6NEE1 506 aa8.65□□□□□ -1.02
CNOT1-202ENST00000441024 ANP32AP39687 249 aaKnown RBP8.65□□□□□ -1.02
CNOT1-202ENST00000441024 POLA1P09884 1462 aaPredicted RBP8.65□□□□□ -1.03
CNOT1-202ENST00000441024 EIF4G2P78344 907 aaKnown RBP eCLIP8.64□□□□□ -1.03
CNOT1-202ENST00000441024 HNRNPUQ00839 825 aaKnown RBP eCLIP8.64□□□□□ -1.03
CNOT1-202ENST00000441024 FANCD2Q9BXW9 1451 aa8.63□□□□□ -1.03
CNOT1-202ENST00000441024 RUSC2Q8N2Y8 1516 aa8.63□□□□□ -1.03
CNOT1-202ENST00000441024 STAG3Q9UJ98 1225 aa8.63□□□□□ -1.03
CNOT1-202ENST00000441024 FKBP8Q14318 412 aa8.62□□□□□ -1.03
CNOT1-202ENST00000441024 CHGAP10645 457 aaKnown RBP8.62□□□□□ -1.03
CNOT1-202ENST00000441024 TMC1Q8TDI8 760 aa8.62□□□□□ -1.03
CNOT1-202ENST00000441024 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.61□□□□□ -1.03
CNOT1-202ENST00000441024 CARMIL1Q5VZK9 1371 aa8.61□□□□□ -1.03
CNOT1-202ENST00000441024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.61□□□□□ -1.037e-7■■■■□ 20.8
CNOT1-202ENST00000441024 FAM9BQ8IZU0 186 aa8.6□□□□□ -1.03
CNOT1-202ENST00000441024 TIMELESSQ9UNS1 1208 aa8.6□□□□□ -1.03
CNOT1-202ENST00000441024 RRP7BPQ9NSQ0 103 aa8.6□□□□□ -1.03
CNOT1-202ENST00000441024 CFAP43Q8NDM7 1665 aa8.59□□□□□ -1.03
CNOT1-202ENST00000441024 SOGA1O94964 1423 aa8.59□□□□□ -1.04
CNOT1-202ENST00000441024 VPS8Q8N3P4 1428 aa8.58□□□□□ -1.04
CNOT1-202ENST00000441024 MRS2Q9HD23 443 aa8.58□□□□□ -1.04
CNOT1-202ENST00000441024 MIER1Q8N108 512 aa8.58□□□□□ -1.04
CNOT1-202ENST00000441024 CFDP1Q9UEE9 299 aaPredicted RBP8.58□□□□□ -1.04
CNOT1-202ENST00000441024 WDR43Q15061 677 aaKnown RBP eCLIP8.58□□□□□ -1.04
CNOT1-202ENST00000441024 FGD5Q6ZNL6 1462 aa8.58□□□□□ -1.04
CNOT1-202ENST00000441024 CCNB3Q8WWL7 1395 aa8.58□□□□□ -1.04
CNOT1-202ENST00000441024 CLASP1Q7Z460 1538 aa8.58□□□□□ -1.04
CNOT1-202ENST00000441024 MRC2Q9UBG0 1479 aa8.57□□□□□ -1.04
CNOT1-202ENST00000441024 CHD1O14646 1710 aa8.57□□□□□ -1.04
CNOT1-202ENST00000441024 CDCA8Q53HL2 280 aa8.56□□□□□ -1.04
CNOT1-202ENST00000441024 KDM2AQ9Y2K7 1162 aa8.56□□□□□ -1.04
CNOT1-202ENST00000441024 ERCC6Q03468 1493 aa8.55□□□□□ -1.04
CNOT1-202ENST00000441024 PDS5BQ9NTI5 1447 aa8.54□□□□□ -1.04
CNOT1-202ENST00000441024 UPF2Q9HAU5 1272 aaKnown RBP8.54□□□□□ -1.04
CNOT1-202ENST00000441024 SLC24A1O60721 1099 aa8.53□□□□□ -1.04
CNOT1-202ENST00000441024 CEP170Q5SW79 1584 aa8.53□□□□□ -1.04
CNOT1-202ENST00000441024 CCDC136Q96JN2 1154 aa8.53□□□□□ -1.04
CNOT1-202ENST00000441024 ARHGAP35Q9NRY4 1499 aa8.51□□□□□ -1.05
CNOT1-202ENST00000441024 SETD5Q9C0A6 1442 aa8.51□□□□□ -1.05
CNOT1-202ENST00000441024 KCNH8Q96L42 1107 aa8.51□□□□□ -1.05
CNOT1-202ENST00000441024 FMN1Q68DA7 1419 aa8.5□□□□□ -1.05
CNOT1-202ENST00000441024 ARHGEF11O15085 1522 aa8.5□□□□□ -1.05
CNOT1-202ENST00000441024 ADCY10Q96PN6 1610 aa8.5□□□□□ -1.05
CNOT1-202ENST00000441024 NPM2Q86SE8 214 aaKnown RBP8.49□□□□□ -1.05
CNOT1-202ENST00000441024 CARMIL2Q6F5E8 1435 aa8.48□□□□□ -1.05
CNOT1-202ENST00000441024 CARD11Q9BXL7 1154 aa8.47□□□□□ -1.05
CNOT1-202ENST00000441024 CFAP53Q96M91 514 aa8.47□□□□□ -1.05
CNOT1-202ENST00000441024 UGGT2Q9NYU1 1516 aa8.47□□□□□ -1.05
CNOT1-202ENST00000441024 RAPGEF2Q9Y4G8 1499 aa8.46□□□□□ -1.05
CNOT1-202ENST00000441024 SCAF1Q9H7N4 1312 aaKnown RBP8.46□□□□□ -1.05
CNOT1-202ENST00000441024 KNSTRNQ9Y448 316 aa8.46□□□□□ -1.06
CNOT1-202ENST00000441024 HIRIP3Q9BW71 556 aaPredicted RBP8.45□□□□□ -1.06
CNOT1-202ENST00000441024 SALL2Q9Y467 1007 aaPredicted RBP8.45□□□□□ -1.06
CNOT1-202ENST00000441024 SNAPC4Q5SXM2 1469 aa8.45□□□□□ -1.06
CNOT1-202ENST00000441024 MAP3K1Q13233 1512 aa8.45□□□□□ -1.06
CNOT1-202ENST00000441024 KANK1Q14678 1352 aa8.45□□□□□ -1.06
CNOT1-202ENST00000441024 CCER2I3L3R5 266 aa8.44□□□□□ -1.06
CNOT1-202ENST00000441024 SIN3AQ96ST3 1273 aa8.44□□□□□ -1.06
CNOT1-202ENST00000441024 ANP32BQ92688 251 aaKnown RBP8.44□□□□□ -1.06
CNOT1-202ENST00000441024 IFT140Q96RY7 1462 aa8.44□□□□□ -1.06
CNOT1-202ENST00000441024 PPP1R15AO75807 674 aaPredicted RBP8.44□□□□□ -1.06
CNOT1-202ENST00000441024 HSP90AA1P07900 732 aaKnown RBP8.44□□□□□ -1.06
CNOT1-202ENST00000441024 RGL3Q3MIN7 710 aa8.43□□□□□ -1.06
CNOT1-202ENST00000441024 NUP160Q12769 1436 aa8.43□□□□□ -1.06
CNOT1-202ENST00000441024 ARAP1Q96P48 1450 aa8.43□□□□□ -1.06
CNOT1-202ENST00000441024 MYH16Q9H6N6 1097 aa8.43□□□□□ -1.06
CNOT1-202ENST00000441024 ZNF608Q9ULD9 1512 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms