RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 NISCHQ9Y2I1 1504 aa12.39□□□□□ -0.43
CNOT1-202ENST00000441024 CCDC180Q9P1Z9 1646 aa11.29□□□□□ -0.6
CNOT1-202ENST00000441024 DCAF8L2P0C7V8 631 aa11□□□□□ -0.65
CNOT1-202ENST00000441024 DCAF1Q9Y4B6 1507 aa10.66□□□□□ -0.7
CNOT1-202ENST00000441024 MYO15BQ96JP2 1530 aa10.61□□□□□ -0.71
CNOT1-202ENST00000441024 ZCCHC6Q5VYS8 1495 aaKnown RBP10.56□□□□□ -0.72
CNOT1-202ENST00000441024 SUPT5HO00267 1087 aaKnown RBP10.54□□□□□ -0.72
CNOT1-202ENST00000441024 UNC13AQ9UPW8 1703 aa10.48□□□□□ -0.73
CNOT1-202ENST00000441024 SHROOM4Q9ULL8 1493 aa10.41□□□□□ -0.74
CNOT1-202ENST00000441024 NACADO15069 1562 aa10.13□□□□□ -0.79
CNOT1-202ENST00000441024 BICRAQ9NZM4 1560 aa10.11□□□□□ -0.79
CNOT1-202ENST00000441024 APLP2Q06481 763 aa10.03□□□□□ -0.8
CNOT1-202ENST00000441024 ABCC9O60706 1549 aa9.94□□□□□ -0.82
CNOT1-202ENST00000441024 EHMT2Q96KQ7 1210 aa9.94□□□□□ -0.82
CNOT1-202ENST00000441024 PEG3Q9GZU2 1588 aa9.91□□□□□ -0.82
CNOT1-202ENST00000441024 FAM9AQ8IZU1 332 aaPredicted RBP9.91□□□□□ -0.82
CNOT1-202ENST00000441024 RB1CC1Q8TDY2 1594 aa9.89□□□□□ -0.83
CNOT1-202ENST00000441024 EIF4G1Q04637 1599 aaKnown RBP9.89□□□□□ -0.83
CNOT1-202ENST00000441024 PELP1Q8IZL8 1130 aaKnown RBP9.88□□□□□ -0.83
CNOT1-202ENST00000441024 TRIM41Q8WV44 630 aa9.88□□□□□ -0.83
CNOT1-202ENST00000441024 ZEB1P37275 1124 aaPredicted RBP9.86□□□□□ -0.83
CNOT1-202ENST00000441024 PCGF6Q9BYE7 350 aa9.8□□□□□ -0.84
CNOT1-202ENST00000441024 UBTFP17480 764 aaKnown RBP9.69□□□□□ -0.86
CNOT1-202ENST00000441024 SCRIBQ14160 1630 aa9.68□□□□□ -0.86
CNOT1-202ENST00000441024 PRDM2Q13029 1718 aa9.67□□□□□ -0.86
CNOT1-202ENST00000441024 CCER1Q8TC90 406 aaPredicted RBP9.65□□□□□ -0.86
CNOT1-202ENST00000441024 SMARCA4P51532 1647 aa9.64□□□□□ -0.87
CNOT1-202ENST00000441024 CENPBP07199 599 aaPredicted RBP9.63□□□□□ -0.87
CNOT1-202ENST00000441024 TTBK1Q5TCY1 1321 aaPredicted RBP9.63□□□□□ -0.87
CNOT1-202ENST00000441024 BAZ1AQ9NRL2 1556 aaPredicted RBP9.61□□□□□ -0.87
CNOT1-202ENST00000441024 TRIM26Q12899 539 aaPredicted RBP9.59□□□□□ -0.87
CNOT1-202ENST00000441024 RANGAP1P46060 587 aaPredicted RBP9.58□□□□□ -0.88
CNOT1-202ENST00000441024 CHIC1Q5VXU3 224 aa9.58□□□□□ -0.88
CNOT1-202ENST00000441024 ATP1B4Q9UN42 357 aaPredicted RBP9.55□□□□□ -0.88
CNOT1-202ENST00000441024 MROH2BQ7Z745 1585 aa9.51□□□□□ -0.89
CNOT1-202ENST00000441024 WIZO95785 1651 aa9.51□□□□□ -0.89
CNOT1-202ENST00000441024 SMARCA2P51531 1590 aa9.48□□□□□ -0.89
CNOT1-202ENST00000441024 HMGXB3Q12766 1538 aa9.47□□□□□ -0.89
CNOT1-202ENST00000441024 CECR2Q9BXF3 1484 aa9.45□□□□□ -0.9
CNOT1-202ENST00000441024 HRCP23327 699 aa9.45□□□□□ -0.9
CNOT1-202ENST00000441024 RSF1Q96T23 1441 aaPredicted RBP9.42□□□□□ -0.9
CNOT1-202ENST00000441024 TOP2AP11388 1531 aaKnown RBP9.41□□□□□ -0.9
CNOT1-202ENST00000441024 LOC105371045A0A1W2PR82 267 aa9.4□□□□□ -0.9
CNOT1-202ENST00000441024 NEFLP07196 543 aa9.38□□□□□ -0.91
CNOT1-202ENST00000441024 PPARGC1BQ86YN6 1023 aaKnown RBP9.36□□□□□ -0.91
CNOT1-202ENST00000441024 ERICH6Q7L0X2 663 aa9.33□□□□□ -0.92
CNOT1-202ENST00000441024 WDR97A6NE52 1622 aa9.32□□□□□ -0.92
CNOT1-202ENST00000441024 NCAPD3P42695 1498 aa9.29□□□□□ -0.92
CNOT1-202ENST00000441024 PABPN1Q86U42 306 aaKnown RBP eCLIP9.28□□□□□ -0.92
CNOT1-202ENST00000441024 BIVM-ERCC5R4GMW8 1640 aa9.28□□□□□ -0.92
CNOT1-202ENST00000441024 ATAD2BQ9ULI0 1458 aa9.26□□□□□ -0.93
CNOT1-202ENST00000441024 HNRNPUL2Q1KMD3 747 aaKnown RBP9.26□□□□□ -0.93
CNOT1-202ENST00000441024 CC2D2AQ9P2K1 1620 aa9.26□□□□□ -0.93
CNOT1-202ENST00000441024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.26□□□□□ -0.93
CNOT1-202ENST00000441024 YTHDC1Q96MU7 727 aaKnown RBP9.25□□□□□ -0.93
CNOT1-202ENST00000441024 ITGAEP38570 1179 aa9.25□□□□□ -0.93
CNOT1-202ENST00000441024 MYT1Q01538 1121 aa9.25□□□□□ -0.93
CNOT1-202ENST00000441024 CSRNP3Q8WYN3 585 aa9.16□□□□□ -0.94
CNOT1-202ENST00000441024 MYT1LQ9UL68 1186 aa9.15□□□□□ -0.94
CNOT1-202ENST00000441024 FAM50AQ14320 339 aaKnown RBP9.13□□□□□ -0.95
CNOT1-202ENST00000441024 DIEXFQ68CQ4 756 aaKnown RBP9.13□□□□□ -0.95
CNOT1-202ENST00000441024 CCDC88BA6NC98 1476 aa9.1□□□□□ -0.95
CNOT1-202ENST00000441024 KIF21AQ7Z4S6 1674 aa9.08□□□□□ -0.96
CNOT1-202ENST00000441024 THOC2Q8NI27 1593 aaKnown RBP9.08□□□□□ -0.96
CNOT1-202ENST00000441024 POLR3GLQ9BT43 218 aa9.08□□□□□ -0.96
CNOT1-202ENST00000441024 TOP2BQ02880 1626 aa9.06□□□□□ -0.96
CNOT1-202ENST00000441024 TRIM52Q96A61 297 aa9.06□□□□□ -0.96
CNOT1-202ENST00000441024 CFTRP13569 1480 aa9.06□□□□□ -0.96
CNOT1-202ENST00000441024 SYNJ1O43426 1573 aa9.04□□□□□ -0.96
CNOT1-202ENST00000441024 LAMC3Q9Y6N6 1575 aa9.03□□□□□ -0.96
CNOT1-202ENST00000441024 ZNF316A6NFI3 1004 aaPredicted RBP9.02□□□□□ -0.97
CNOT1-202ENST00000441024 DAXXQ9UER7 740 aaPredicted RBP9.02□□□□□ -0.97
CNOT1-202ENST00000441024 TARBP1Q13395 1621 aaKnown RBP9.01□□□□□ -0.97
CNOT1-202ENST00000441024 NEUROD1Q13562 356 aa8.99□□□□□ -0.97
CNOT1-202ENST00000441024 CDK11AQ9UQ88 783 aaPredicted RBP8.98□□□□□ -0.97
CNOT1-202ENST00000441024 EEA1Q15075 1411 aa8.98□□□□□ -0.97
CNOT1-202ENST00000441024 ABCA5Q8WWZ7 1642 aa8.98□□□□□ -0.97
CNOT1-202ENST00000441024 ANP32CO43423 234 aa8.98□□□□□ -0.97
CNOT1-202ENST00000441024 CUX1P39880 1505 aa8.93□□□□□ -0.98
CNOT1-202ENST00000441024 FBLN2P98095 1184 aa8.93□□□□□ -0.98
CNOT1-202ENST00000441024 WDR62O43379 1518 aa8.92□□□□□ -0.98
CNOT1-202ENST00000441024 BAZ1BQ9UIG0 1483 aaKnown RBP8.92□□□□□ -0.98
CNOT1-202ENST00000441024 P3H3Q8IVL6 736 aa8.91□□□□□ -0.98
CNOT1-202ENST00000441024 SLC4A1APQ9BWU0 796 aaKnown RBP8.9□□□□□ -0.98
CNOT1-202ENST00000441024 CLSPNQ9HAW4 1339 aa8.89□□□□□ -0.99
CNOT1-202ENST00000441024 CNGB1Q14028 1251 aaPredicted RBP8.88□□□□□ -0.99
CNOT1-202ENST00000441024 GOLGA3Q08378 1498 aa8.87□□□□□ -0.99
CNOT1-202ENST00000441024 PBRM1Q86U86 1689 aa8.87□□□□□ -0.99
CNOT1-202ENST00000441024 CLIP1P30622 1438 aa8.86□□□□□ -0.99
CNOT1-202ENST00000441024 LRRIQ1Q96JM4 1722 aa8.86□□□□□ -0.99
CNOT1-202ENST00000441024 ACIN1Q9UKV3 1341 aaKnown RBP8.86□□□□□ -0.99
CNOT1-202ENST00000441024 DNMBPQ6XZF7 1577 aa8.86□□□□□ -0.99
CNOT1-202ENST00000441024 ZNF326Q5BKZ1 582 aaKnown RBP8.85□□□□□ -0.99
CNOT1-202ENST00000441024 KIF21BO75037 1637 aa8.85□□□□□ -0.99
CNOT1-202ENST00000441024 GTF3C3Q9Y5Q9 886 aa8.84□□□□□ -0.99
CNOT1-202ENST00000441024 TONSLQ96HA7 1378 aa8.84□□□□□ -0.99
CNOT1-202ENST00000441024 WRNQ14191 1432 aaPredicted RBP eCLIP8.84□□□□□ -0.99
CNOT1-202ENST00000441024 ABCC8Q09428 1581 aa8.83□□□□□ -1
CNOT1-202ENST00000441024 RTL5Q5HYW3 569 aaPredicted RBP8.82□□□□□ -1
CNOT1-202ENST00000441024 URB2Q14146 1524 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms