RNA–Protein interactions for RNA: ENST00000437568.6

PMS2P3-205, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 5

Gene PMS2P3, Length 1,185 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-205ENST00000437568 RUSC2Q8N2Y8 1516 aa43.18■■■■■ 4.5
PMS2P3-205ENST00000437568 PRG4Q92954 1404 aaPredicted RBP43.18■■■■■ 4.5
PMS2P3-205ENST00000437568 TRHP20396 242 aaPredicted RBP43.15■■■■■ 4.5
PMS2P3-205ENST00000437568 KIAA0586Q9BVV6 1533 aa43.1■■■■■ 4.49
PMS2P3-205ENST00000437568 RAPGEF2Q9Y4G8 1499 aa42.82■■■■■ 4.45
PMS2P3-205ENST00000437568 IQGAP2Q13576 1575 aa42.7■■■■■ 4.43
PMS2P3-205ENST00000437568 CARMIL2Q6F5E8 1435 aa42.62■■■■■ 4.41
PMS2P3-205ENST00000437568 PTPRGP23470 1445 aa42.6■■■■■ 4.41
PMS2P3-205ENST00000437568 ADCY10Q96PN6 1610 aa42.57■■■■■ 4.4
PMS2P3-205ENST00000437568 TNIKQ9UKE5 1360 aa42.56■■■■■ 4.4
PMS2P3-205ENST00000437568 PRXQ9BXM0 1461 aa42.55■■■■■ 4.4
PMS2P3-205ENST00000437568 NPM1P06748 294 aaKnown RBP eCLIP42.54■■■■■ 4.4
PMS2P3-205ENST00000437568 DISP1Q96F81 1524 aa42.52■■■■■ 4.4
PMS2P3-205ENST00000437568 UGGT2Q9NYU1 1516 aa42.51■■■■■ 4.39
PMS2P3-205ENST00000437568 TTBK1Q5TCY1 1321 aaPredicted RBP42.47■■■■■ 4.39
PMS2P3-205ENST00000437568 MAPKBP1O60336 1514 aa42.41■■■■■ 4.38
PMS2P3-205ENST00000437568 CSRNP3Q8WYN3 585 aa42.4■■■■■ 4.38
PMS2P3-205ENST00000437568 ABCC10Q5T3U5 1492 aa42.33■■■■■ 4.37
PMS2P3-205ENST00000437568 CTTNBP2Q8WZ74 1663 aa42.33■■■■■ 4.37
PMS2P3-205ENST00000437568 KIF13AQ9H1H9 1805 aa42.33■■■■■ 4.37
PMS2P3-205ENST00000437568 KIAA0556O60303 1618 aa42.31■■■■■ 4.36
PMS2P3-205ENST00000437568 FAM69CQ0P6D2 419 aa42.29■■■■■ 4.36
PMS2P3-205ENST00000437568 UACAQ9BZF9 1416 aa42.29■■■■■ 4.36
PMS2P3-205ENST00000437568 UHRF1BP1LA0JNW5 1464 aa42.28■■■■■ 4.36
PMS2P3-205ENST00000437568 EEA1Q15075 1411 aa42.27■■■■■ 4.36
PMS2P3-205ENST00000437568 ABCC2Q92887 1545 aa42.26■■■■■ 4.36
PMS2P3-205ENST00000437568 DIP2BQ9P265 1576 aa42.19■■■■■ 4.34
PMS2P3-205ENST00000437568 GOLGA3Q08378 1498 aa42.18■■■■■ 4.34
PMS2P3-205ENST00000437568 CHIC1Q5VXU3 224 aa42.14■■■■■ 4.34
PMS2P3-205ENST00000437568 FAM9AQ8IZU1 332 aaPredicted RBP42.1■■■■■ 4.33
PMS2P3-205ENST00000437568 KDM5BQ9UGL1 1544 aa42.08■■■■■ 4.33
PMS2P3-205ENST00000437568 ASXL2Q76L83 1435 aa42.07■■■■■ 4.33
PMS2P3-205ENST00000437568 PLB1Q6P1J6 1458 aa42.04■■■■■ 4.32
PMS2P3-205ENST00000437568 ABCA8O94911 1581 aa41.93■■■■■ 4.3
PMS2P3-205ENST00000437568 ZCCHC11Q5TAX3 1644 aaKnown RBP41.92■■■■■ 4.3
PMS2P3-205ENST00000437568 P3H3Q8IVL6 736 aa41.92■■■■■ 4.3
PMS2P3-205ENST00000437568 GLI2P10070 1586 aa41.88■■■■■ 4.3
PMS2P3-205ENST00000437568 KIF21BO75037 1637 aa41.85■■■■■ 4.29
PMS2P3-205ENST00000437568 SAMD9Q5K651 1589 aa41.84■■■■■ 4.29
PMS2P3-205ENST00000437568 EPRSP07814 1512 aaKnown RBP41.82■■■■■ 4.29
PMS2P3-205ENST00000437568 TSPOAP1O95153 1857 aa41.79■■■■■ 4.28
PMS2P3-205ENST00000437568 WDR7Q9Y4E6 1490 aa41.73■■■■■ 4.27
PMS2P3-205ENST00000437568 RANGAP1P46060 587 aaPredicted RBP41.73■■■■■ 4.27
PMS2P3-205ENST00000437568 PPRC1Q5VV67 1664 aaKnown RBP41.67■■■■■ 4.26
PMS2P3-205ENST00000437568 KDM6BO15054 1643 aa41.65■■■■■ 4.26
PMS2P3-205ENST00000437568 MAP3K4Q9Y6R4 1608 aa41.63■■■■■ 4.26
PMS2P3-205ENST00000437568 ATP10BO94823 1461 aa41.62■■■■■ 4.25
PMS2P3-205ENST00000437568 FHOD3Q2V2M9 1422 aa41.61■■■■■ 4.25
PMS2P3-205ENST00000437568 ARID3CA6NKF2 412 aa41.6■■■■■ 4.25
PMS2P3-205ENST00000437568 EHMT2Q96KQ7 1210 aa41.59■■■■■ 4.25
PMS2P3-205ENST00000437568 KCNH8Q96L42 1107 aa41.58■■■■■ 4.25
PMS2P3-205ENST00000437568 UBTFP17480 764 aaKnown RBP41.57■■■■■ 4.25
PMS2P3-205ENST00000437568 RAPGEF6Q8TEU7 1601 aa41.54■■■■■ 4.24
PMS2P3-205ENST00000437568 EFCAB5A4FU69 1503 aa41.53■■■■■ 4.24
PMS2P3-205ENST00000437568 TEX14Q8IWB6 1497 aa41.48■■■■■ 4.23
PMS2P3-205ENST00000437568 NUP153P49790 1475 aaKnown RBP41.46■■■■■ 4.23
PMS2P3-205ENST00000437568 CD109Q6YHK3 1445 aa41.44■■■■■ 4.23
PMS2P3-205ENST00000437568 COL17A1Q9UMD9 1497 aaPredicted RBP41.43■■■■■ 4.22
PMS2P3-205ENST00000437568 AEBP2Q6ZN18 517 aaPredicted RBP41.4■■■■■ 4.22
PMS2P3-205ENST00000437568 MAGI3Q5TCQ9 1506 aa41.39■■■■■ 4.22
PMS2P3-205ENST00000437568 CFAP43Q8NDM7 1665 aa41.39■■■■■ 4.22
PMS2P3-205ENST00000437568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.36■■■■■ 4.21
PMS2P3-205ENST00000437568 HNRNPUL2Q1KMD3 747 aaKnown RBP41.36■■■■■ 4.21
PMS2P3-205ENST00000437568 ARHGAP35Q9NRY4 1499 aa41.3■■■■■ 4.2
PMS2P3-205ENST00000437568 ABCA9Q8IUA7 1624 aa41.22■■■■■ 4.19
PMS2P3-205ENST00000437568 PLEKHD1A6NEE1 506 aa41.2■■■■■ 4.19
PMS2P3-205ENST00000437568 FMN1Q68DA7 1419 aa41.18■■■■■ 4.18
PMS2P3-205ENST00000437568 KDM4FA0A1W2PPD8 638 aa41.12■■■■■ 4.17
PMS2P3-205ENST00000437568 CDK13Q14004 1512 aaKnown RBP41.08■■■■■ 4.17
PMS2P3-205ENST00000437568 ARAP3Q8WWN8 1544 aa41.06■■■■■ 4.16
PMS2P3-205ENST00000437568 PHLDB1Q86UU1 1377 aa41.04■■■■■ 4.16
PMS2P3-205ENST00000437568 ATP1B4Q9UN42 357 aaPredicted RBP41.04■■■■■ 4.16
PMS2P3-205ENST00000437568 HECW1Q76N89 1606 aa41■■■■■ 4.15
PMS2P3-205ENST00000437568 NEO1Q92859 1461 aa40.98■■■■■ 4.15
PMS2P3-205ENST00000437568 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.95■■■■■ 4.154e-7■■□□□ 13.5
PMS2P3-205ENST00000437568 CDK11AQ9UQ88 783 aaPredicted RBP40.87■■■■■ 4.13
PMS2P3-205ENST00000437568 TTC37Q6PGP7 1564 aa40.86■■■■■ 4.13
PMS2P3-205ENST00000437568 RAPGEF3O95398 923 aa40.85■■■■■ 4.13
PMS2P3-205ENST00000437568 ADGRL1O94910 1474 aa40.84■■■■■ 4.13
PMS2P3-205ENST00000437568 CLIP1P30622 1438 aa40.84■■■■■ 4.13
PMS2P3-205ENST00000437568 CASKIN1Q8WXD9 1431 aa40.83■■■■■ 4.13
PMS2P3-205ENST00000437568 FANCAO15360 1455 aa40.78■■■■■ 4.12
PMS2P3-205ENST00000437568 AKNAQ7Z591 1439 aa40.78■■■■■ 4.12
PMS2P3-205ENST00000437568 LRRIQ1Q96JM4 1722 aa40.77■■■■■ 4.12
PMS2P3-205ENST00000437568 TROQ12816 1431 aaPredicted RBP40.76■■■■■ 4.11
PMS2P3-205ENST00000437568 PLCH2O75038 1416 aa40.75■■■■■ 4.11
PMS2P3-205ENST00000437568 PCF11O94913 1555 aaKnown RBP40.74■■■■■ 4.11
PMS2P3-205ENST00000437568 FRMPD1Q5SYB0 1578 aa40.72■■■■■ 4.11
PMS2P3-205ENST00000437568 DENND4BO75064 1496 aaPredicted RBP40.69■■■■■ 4.1
PMS2P3-205ENST00000437568 CFAP74Q9C0B2 1584 aa40.69■■■■■ 4.1
PMS2P3-205ENST00000437568 CCDC18Q5T9S5 1454 aa40.67■■■■■ 4.1
PMS2P3-205ENST00000437568 KIF14Q15058 1648 aa40.67■■■■■ 4.1
PMS2P3-205ENST00000437568 FYCO1Q9BQS8 1478 aa40.64■■■■■ 4.1
PMS2P3-205ENST00000437568 EFCAB2Q5VUJ9 269 aa40.58■■■■■ 4.09
PMS2P3-205ENST00000437568 RICTORQ6R327 1708 aa40.58■■■■■ 4.09
PMS2P3-205ENST00000437568 MYO5CQ9NQX4 1742 aa40.54■■■■■ 4.08
PMS2P3-205ENST00000437568 SCAPERQ9BY12 1400 aa40.53■■■■■ 4.08
PMS2P3-205ENST00000437568 CEP162Q5TB80 1403 aa40.5■■■■■ 4.07
PMS2P3-205ENST00000437568 ZMYM4Q5VZL5 1548 aa40.47■■■■■ 4.07
PMS2P3-205ENST00000437568 POGZQ7Z3K3 1410 aa40.45■■■■■ 4.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms