RNA–Protein interactions for RNA: ENST00000436367.5

ATXN1-202, Transcript of ataxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN1, Length 10,587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-202ENST00000436367 VPS8Q8N3P4 1428 aa12.7□□□□□ -0.38
ATXN1-202ENST00000436367 BCL11AQ9H165 835 aa12.7□□□□□ -0.38
ATXN1-202ENST00000436367 STAG3Q9UJ98 1225 aa12.7□□□□□ -0.38
ATXN1-202ENST00000436367 ANP32AP39687 249 aaKnown RBP12.7□□□□□ -0.38
ATXN1-202ENST00000436367 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
ATXN1-202ENST00000436367 FMN1Q68DA7 1419 aa12.68□□□□□ -0.38
ATXN1-202ENST00000436367 ARHGAP35Q9NRY4 1499 aa12.66□□□□□ -0.38
ATXN1-202ENST00000436367 CHIC2Q9UKJ5 165 aa12.66□□□□□ -0.38
ATXN1-202ENST00000436367 SOGA1O94964 1423 aa12.66□□□□□ -0.38
ATXN1-202ENST00000436367 CCNB3Q8WWL7 1395 aa12.65□□□□□ -0.38
ATXN1-202ENST00000436367 CARMIL2Q6F5E8 1435 aa12.64□□□□□ -0.39
ATXN1-202ENST00000436367 CADPSQ9ULU8 1353 aa12.64□□□□□ -0.39
ATXN1-202ENST00000436367 NPM2Q86SE8 214 aaKnown RBP12.64□□□□□ -0.39
ATXN1-202ENST00000436367 CFDP1Q9UEE9 299 aaPredicted RBP12.64□□□□□ -0.39
ATXN1-202ENST00000436367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.6□□□□□ -0.392e-6■□□□□ 11.3
ATXN1-202ENST00000436367 CHGAP10645 457 aaKnown RBP12.59□□□□□ -0.39
ATXN1-202ENST00000436367 RAPGEF2Q9Y4G8 1499 aa12.59□□□□□ -0.39
ATXN1-202ENST00000436367 EIF4G2P78344 907 aaKnown RBP eCLIP12.57□□□□□ -0.4
ATXN1-202ENST00000436367 CDCA8Q53HL2 280 aa12.55□□□□□ -0.4
ATXN1-202ENST00000436367 RRP7BPQ9NSQ0 103 aa12.55□□□□□ -0.4
ATXN1-202ENST00000436367 KANK1Q14678 1352 aa12.54□□□□□ -0.4
ATXN1-202ENST00000436367 SLC24A1O60721 1099 aa12.53□□□□□ -0.4
ATXN1-202ENST00000436367 FANCD2Q9BXW9 1451 aa12.53□□□□□ -0.4
ATXN1-202ENST00000436367 TNNT2P45379 298 aaPredicted RBP12.52□□□□□ -0.41
ATXN1-202ENST00000436367 CCDC18Q5T9S5 1454 aa12.52□□□□□ -0.41
ATXN1-202ENST00000436367 HSP90AA1P07900 732 aaKnown RBP12.52□□□□□ -0.41
ATXN1-202ENST00000436367 HMGXB3Q12766 1538 aa12.51□□□□□ -0.41
ATXN1-202ENST00000436367 TIMELESSQ9UNS1 1208 aa12.51□□□□□ -0.41
ATXN1-202ENST00000436367 TMC1Q8TDI8 760 aa12.51□□□□□ -0.41
ATXN1-202ENST00000436367 DDX10Q13206 875 aaKnown RBP12.51□□□□□ -0.41
ATXN1-202ENST00000436367 KCNH8Q96L42 1107 aa12.51□□□□□ -0.41
ATXN1-202ENST00000436367 HNRNPUQ00839 825 aaKnown RBP eCLIP12.51□□□□□ -0.41
ATXN1-202ENST00000436367 WDR43Q15061 677 aaKnown RBP eCLIP12.5□□□□□ -0.41
ATXN1-202ENST00000436367 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.5□□□□□ -0.41
ATXN1-202ENST00000436367 CDK11BP21127 795 aaKnown RBP12.49□□□□□ -0.41
ATXN1-202ENST00000436367 ARXQ96QS3 562 aa12.49□□□□□ -0.41
ATXN1-202ENST00000436367 NCAPD3P42695 1498 aa12.48□□□□□ -0.41
ATXN1-202ENST00000436367 SETD5Q9C0A6 1442 aa12.48□□□□□ -0.41
ATXN1-202ENST00000436367 PPP1R15AO75807 674 aaPredicted RBP12.48□□□□□ -0.41
ATXN1-202ENST00000436367 MRS2Q9HD23 443 aa12.47□□□□□ -0.41
ATXN1-202ENST00000436367 NBR1Q14596 966 aa12.46□□□□□ -0.41
ATXN1-202ENST00000436367 KDM2AQ9Y2K7 1162 aa12.45□□□□□ -0.42
ATXN1-202ENST00000436367 KIF21BO75037 1637 aa12.45□□□□□ -0.42
ATXN1-202ENST00000436367 UPF2Q9HAU5 1272 aaKnown RBP12.43□□□□□ -0.42
ATXN1-202ENST00000436367 FAM9BQ8IZU0 186 aa12.43□□□□□ -0.42
ATXN1-202ENST00000436367 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
ATXN1-202ENST00000436367 TDRD9Q8NDG6 1382 aaKnown RBP12.42□□□□□ -0.42
ATXN1-202ENST00000436367 CUX1P39880 1505 aa12.42□□□□□ -0.42
ATXN1-202ENST00000436367 FGD5Q6ZNL6 1462 aa12.4□□□□□ -0.42
ATXN1-202ENST00000436367 ANKRD30AQ9BXX3 1397 aa12.39□□□□□ -0.43
ATXN1-202ENST00000436367 CFAP53Q96M91 514 aa12.39□□□□□ -0.43
ATXN1-202ENST00000436367 KNSTRNQ9Y448 316 aa12.39□□□□□ -0.43
ATXN1-202ENST00000436367 CARD11Q9BXL7 1154 aa12.37□□□□□ -0.43
ATXN1-202ENST00000436367 GAPVD1Q14C86 1478 aa12.37□□□□□ -0.43
ATXN1-202ENST00000436367 FHOD3Q2V2M9 1422 aa12.36□□□□□ -0.43
ATXN1-202ENST00000436367 TOP2BQ02880 1626 aa12.36□□□□□ -0.43
ATXN1-202ENST00000436367 FKBP8Q14318 412 aa12.36□□□□□ -0.43
ATXN1-202ENST00000436367 MYH16Q9H6N6 1097 aa12.35□□□□□ -0.43
ATXN1-202ENST00000436367 ARID4BQ4LE39 1312 aaPredicted RBP12.35□□□□□ -0.43
ATXN1-202ENST00000436367 UNC13AQ9UPW8 1703 aa12.34□□□□□ -0.43
ATXN1-202ENST00000436367 RSPH4AQ5TD94 716 aa12.34□□□□□ -0.43
ATXN1-202ENST00000436367 EIF3AQ14152 1382 aaKnown RBP12.33□□□□□ -0.44
ATXN1-202ENST00000436367 CCDC136Q96JN2 1154 aa12.33□□□□□ -0.44
ATXN1-202ENST00000436367 PRDM2Q13029 1718 aa12.33□□□□□ -0.44
ATXN1-202ENST00000436367 CC2D2AQ9P2K1 1620 aa12.33□□□□□ -0.44
ATXN1-202ENST00000436367 CFTRP13569 1480 aa12.32□□□□□ -0.44
ATXN1-202ENST00000436367 EFCAB5A4FU69 1503 aa12.32□□□□□ -0.44
ATXN1-202ENST00000436367 HDGFP51858 240 aaKnown RBP12.32□□□□□ -0.44
ATXN1-202ENST00000436367 MIER1Q8N108 512 aa12.31□□□□□ -0.44
ATXN1-202ENST00000436367 PLPPR3Q6T4P5 718 aa12.31□□□□□ -0.44
ATXN1-202ENST00000436367 EFCAB2Q5VUJ9 269 aa12.29□□□□□ -0.44
ATXN1-202ENST00000436367 RAB3GAP2Q9H2M9 1393 aa12.29□□□□□ -0.44
ATXN1-202ENST00000436367 RGL3Q3MIN7 710 aa12.29□□□□□ -0.44
ATXN1-202ENST00000436367 SYNJ1O43426 1573 aa12.28□□□□□ -0.44
ATXN1-202ENST00000436367 DNMBPQ6XZF7 1577 aa12.27□□□□□ -0.45
ATXN1-202ENST00000436367 TMF1P82094 1093 aa12.26□□□□□ -0.45
ATXN1-202ENST00000436367 C14orf37Q86TY3 774 aa12.26□□□□□ -0.45
ATXN1-202ENST00000436367 MRC2Q9UBG0 1479 aa12.26□□□□□ -0.45
ATXN1-202ENST00000436367 FYCO1Q9BQS8 1478 aa12.25□□□□□ -0.45
ATXN1-202ENST00000436367 POGKQ9P215 609 aa12.25□□□□□ -0.45
ATXN1-202ENST00000436367 KANK4Q5T7N3 995 aaPredicted RBP12.25□□□□□ -0.45
ATXN1-202ENST00000436367 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
ATXN1-202ENST00000436367 NUDCQ9Y266 331 aa12.24□□□□□ -0.45
ATXN1-202ENST00000436367 CUL7Q14999 1698 aa12.24□□□□□ -0.45
ATXN1-202ENST00000436367 TRIM44Q96DX7 344 aaPredicted RBP12.24□□□□□ -0.45
ATXN1-202ENST00000436367 PNNQ9H307 717 aaKnown RBP12.24□□□□□ -0.45
ATXN1-202ENST00000436367 NUP155O75694 1391 aa12.24□□□□□ -0.45
ATXN1-202ENST00000436367 CHMP4BQ9H444 224 aaKnown RBP12.23□□□□□ -0.45
ATXN1-202ENST00000436367 PEG3Q9GZU2 1588 aa12.23□□□□□ -0.45
ATXN1-202ENST00000436367 HECW1Q76N89 1606 aa12.23□□□□□ -0.45
ATXN1-202ENST00000436367 UACAQ9BZF9 1416 aa12.22□□□□□ -0.45
ATXN1-202ENST00000436367 AMER1Q5JTC6 1135 aaPredicted RBP12.22□□□□□ -0.45
ATXN1-202ENST00000436367 MAPK8IP3Q9UPT6 1336 aa12.22□□□□□ -0.45
ATXN1-202ENST00000436367 ROCK2O75116 1388 aaKnown RBP12.22□□□□□ -0.45
ATXN1-202ENST00000436367 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.45
ATXN1-202ENST00000436367 DCAF11Q8TEB1 546 aa12.21□□□□□ -0.45
ATXN1-202ENST00000436367 IFT140Q96RY7 1462 aa12.21□□□□□ -0.45
ATXN1-202ENST00000436367 CCER2I3L3R5 266 aa12.21□□□□□ -0.46
ATXN1-202ENST00000436367 PKD2Q13563 968 aa12.21□□□□□ -0.46
ATXN1-202ENST00000436367 HIRIP3Q9BW71 556 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms