RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 CARMIL1Q5VZK9 1371 aa23.72■■□□□ 1.39
PTPN7-203ENST00000435759 RUSC2Q8N2Y8 1516 aa23.72■■□□□ 1.39
PTPN7-203ENST00000435759 KIAA0586Q9BVV6 1533 aa23.72■■□□□ 1.39
PTPN7-203ENST00000435759 NPM1P06748 294 aaKnown RBP eCLIP23.69■■□□□ 1.38
PTPN7-203ENST00000435759 FAM69CQ0P6D2 419 aa23.67■■□□□ 1.38
PTPN7-203ENST00000435759 TTBK1Q5TCY1 1321 aaPredicted RBP23.66■■□□□ 1.38
PTPN7-203ENST00000435759 AEBP2Q6ZN18 517 aaPredicted RBP23.6■■□□□ 1.37
PTPN7-203ENST00000435759 CUL7Q14999 1698 aa23.58■■□□□ 1.37
PTPN7-203ENST00000435759 PTPRGP23470 1445 aa23.58■■□□□ 1.36
PTPN7-203ENST00000435759 ABCC10Q5T3U5 1492 aa23.55■■□□□ 1.36
PTPN7-203ENST00000435759 ADCY10Q96PN6 1610 aa23.55■■□□□ 1.36
PTPN7-203ENST00000435759 KIF13AQ9H1H9 1805 aa23.52■■□□□ 1.36
PTPN7-203ENST00000435759 TNIKQ9UKE5 1360 aa23.5■■□□□ 1.35
PTPN7-203ENST00000435759 MAPKBP1O60336 1514 aa23.48■■□□□ 1.35
PTPN7-203ENST00000435759 CARMIL2Q6F5E8 1435 aa23.46■■□□□ 1.35
PTPN7-203ENST00000435759 RAPGEF2Q9Y4G8 1499 aa23.43■■□□□ 1.34
PTPN7-203ENST00000435759 DIP2BQ9P265 1576 aa23.4■■□□□ 1.34
PTPN7-203ENST00000435759 DISP1Q96F81 1524 aa23.4■■□□□ 1.34
PTPN7-203ENST00000435759 IQGAP2Q13576 1575 aa23.4■■□□□ 1.34
PTPN7-203ENST00000435759 ABCC2Q92887 1545 aa23.35■■□□□ 1.33
PTPN7-203ENST00000435759 UACAQ9BZF9 1416 aa23.34■■□□□ 1.33
PTPN7-203ENST00000435759 ASXL2Q76L83 1435 aa23.33■■□□□ 1.32
PTPN7-203ENST00000435759 UHRF1BP1LA0JNW5 1464 aa23.3■■□□□ 1.32
PTPN7-203ENST00000435759 UGGT2Q9NYU1 1516 aa23.3■■□□□ 1.32
PTPN7-203ENST00000435759 PLB1Q6P1J6 1458 aa23.26■■□□□ 1.31
PTPN7-203ENST00000435759 TSPOAP1O95153 1857 aa23.24■■□□□ 1.31
PTPN7-203ENST00000435759 KDM4FA0A1W2PPD8 638 aa23.24■■□□□ 1.31
PTPN7-203ENST00000435759 PRXQ9BXM0 1461 aa23.21■■□□□ 1.31
PTPN7-203ENST00000435759 KDM5BQ9UGL1 1544 aa23.21■■□□□ 1.31
PTPN7-203ENST00000435759 KDM6BO15054 1643 aa23.19■■□□□ 1.3
PTPN7-203ENST00000435759 KIAA0556O60303 1618 aa23.19■■□□□ 1.3
PTPN7-203ENST00000435759 P3H3Q8IVL6 736 aa23.17■■□□□ 1.3
PTPN7-203ENST00000435759 EPRSP07814 1512 aaKnown RBP23.17■■□□□ 1.3
PTPN7-203ENST00000435759 CSRNP3Q8WYN3 585 aa23.16■■□□□ 1.3
PTPN7-203ENST00000435759 GLI2P10070 1586 aa23.15■■□□□ 1.3
PTPN7-203ENST00000435759 COL17A1Q9UMD9 1497 aaPredicted RBP23.14■■□□□ 1.29
PTPN7-203ENST00000435759 KCNH8Q96L42 1107 aa23.14■■□□□ 1.29
PTPN7-203ENST00000435759 ARID3CA6NKF2 412 aa23.1■■□□□ 1.29
PTPN7-203ENST00000435759 ZCCHC11Q5TAX3 1644 aaKnown RBP23.09■■□□□ 1.29
PTPN7-203ENST00000435759 GOLGA3Q08378 1498 aa23.09■■□□□ 1.29
PTPN7-203ENST00000435759 PPRC1Q5VV67 1664 aaKnown RBP23.09■■□□□ 1.29
PTPN7-203ENST00000435759 FAM9AQ8IZU1 332 aaPredicted RBP23.04■■□□□ 1.28
PTPN7-203ENST00000435759 WDR7Q9Y4E6 1490 aa23.04■■□□□ 1.28
PTPN7-203ENST00000435759 ABCA8O94911 1581 aa23.03■■□□□ 1.28
PTPN7-203ENST00000435759 CTTNBP2Q8WZ74 1663 aa23.03■■□□□ 1.28
PTPN7-203ENST00000435759 RANGAP1P46060 587 aaPredicted RBP23.02■■□□□ 1.28
PTPN7-203ENST00000435759 MAP3K4Q9Y6R4 1608 aa23■■□□□ 1.27
PTPN7-203ENST00000435759 CD109Q6YHK3 1445 aa22.98■■□□□ 1.27
PTPN7-203ENST00000435759 ATP10BO94823 1461 aa22.95■■□□□ 1.26
PTPN7-203ENST00000435759 TEX14Q8IWB6 1497 aa22.95■■□□□ 1.26
PTPN7-203ENST00000435759 MAGI3Q5TCQ9 1506 aa22.88■■□□□ 1.25
PTPN7-203ENST00000435759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.87■■□□□ 1.25
PTPN7-203ENST00000435759 HNRNPUL2Q1KMD3 747 aaKnown RBP22.87■■□□□ 1.25
PTPN7-203ENST00000435759 ADGRL1O94910 1474 aa22.86■■□□□ 1.25
PTPN7-203ENST00000435759 EHMT2Q96KQ7 1210 aa22.86■■□□□ 1.25
PTPN7-203ENST00000435759 EEA1Q15075 1411 aa22.83■■□□□ 1.25
PTPN7-203ENST00000435759 SAMD9Q5K651 1589 aa22.81■■□□□ 1.24
PTPN7-203ENST00000435759 FHOD3Q2V2M9 1422 aa22.81■■□□□ 1.24
PTPN7-203ENST00000435759 CHIC1Q5VXU3 224 aa22.78■■□□□ 1.24
PTPN7-203ENST00000435759 CFAP43Q8NDM7 1665 aa22.77■■□□□ 1.24
PTPN7-203ENST00000435759 RAPGEF3O95398 923 aa22.77■■□□□ 1.24
PTPN7-203ENST00000435759 NUP153P49790 1475 aaKnown RBP22.75■■□□□ 1.23
PTPN7-203ENST00000435759 PLEKHD1A6NEE1 506 aa22.73■■□□□ 1.23
PTPN7-203ENST00000435759 RAPGEF6Q8TEU7 1601 aa22.72■■□□□ 1.23
PTPN7-203ENST00000435759 ARAP3Q8WWN8 1544 aa22.72■■□□□ 1.23
PTPN7-203ENST00000435759 UBTFP17480 764 aaKnown RBP22.71■■□□□ 1.23
PTPN7-203ENST00000435759 ABCA9Q8IUA7 1624 aa22.66■■□□□ 1.22
PTPN7-203ENST00000435759 PHLDB1Q86UU1 1377 aa22.65■■□□□ 1.22
PTPN7-203ENST00000435759 ATP1B4Q9UN42 357 aaPredicted RBP22.63■■□□□ 1.21
PTPN7-203ENST00000435759 KIF21BO75037 1637 aa22.62■■□□□ 1.21
PTPN7-203ENST00000435759 NEO1Q92859 1461 aa22.6■■□□□ 1.21
PTPN7-203ENST00000435759 EFCAB5A4FU69 1503 aa22.55■■□□□ 1.2
PTPN7-203ENST00000435759 AKNAQ7Z591 1439 aa22.54■■□□□ 1.2
PTPN7-203ENST00000435759 CDK13Q14004 1512 aaKnown RBP22.53■■□□□ 1.2
PTPN7-203ENST00000435759 ARID4BQ4LE39 1312 aaPredicted RBP22.53■■□□□ 1.2
PTPN7-203ENST00000435759 ILDR1Q86SU0 546 aaPredicted RBP22.52■■□□□ 1.2
PTPN7-203ENST00000435759 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.52■■□□□ 1.19
PTPN7-203ENST00000435759 ARHGAP35Q9NRY4 1499 aa22.51■■□□□ 1.19
PTPN7-203ENST00000435759 HECW2Q9P2P5 1572 aa22.5■■□□□ 1.19
PTPN7-203ENST00000435759 FANCAO15360 1455 aa22.48■■□□□ 1.19
PTPN7-203ENST00000435759 DENND4BO75064 1496 aaPredicted RBP22.48■■□□□ 1.19
PTPN7-203ENST00000435759 FRMPD1Q5SYB0 1578 aa22.48■■□□□ 1.19
PTPN7-203ENST00000435759 FMN1Q68DA7 1419 aa22.44■■□□□ 1.18
PTPN7-203ENST00000435759 TTC37Q6PGP7 1564 aa22.43■■□□□ 1.18
PTPN7-203ENST00000435759 PTPRMP28827 1452 aa22.43■■□□□ 1.18
PTPN7-203ENST00000435759 PLCH2O75038 1416 aa22.43■■□□□ 1.18
PTPN7-203ENST00000435759 CDK11AQ9UQ88 783 aaPredicted RBP22.41■■□□□ 1.18
PTPN7-203ENST00000435759 SCAPERQ9BY12 1400 aa22.4■■□□□ 1.18
PTPN7-203ENST00000435759 EFCAB2Q5VUJ9 269 aa22.4■■□□□ 1.18
PTPN7-203ENST00000435759 YEATS2Q9ULM3 1422 aa22.4■■□□□ 1.18
PTPN7-203ENST00000435759 ADAMTSL3P82987 1691 aa22.39■■□□□ 1.18
PTPN7-203ENST00000435759 MLECQ14165 292 aa22.37■■□□□ 1.17
PTPN7-203ENST00000435759 PLPPR3Q6T4P5 718 aa22.37■■□□□ 1.17
PTPN7-203ENST00000435759 RICTORQ6R327 1708 aa22.34■■□□□ 1.17
PTPN7-203ENST00000435759 AFAP1Q8N556 730 aa22.34■■□□□ 1.17
PTPN7-203ENST00000435759 BCORL1Q5H9F3 1711 aa22.32■■□□□ 1.16
PTPN7-203ENST00000435759 TROQ12816 1431 aaPredicted RBP22.31■■□□□ 1.16
PTPN7-203ENST00000435759 HECW1Q76N89 1606 aa22.31■■□□□ 1.16
PTPN7-203ENST00000435759 ARHGEF40Q8TER5 1519 aa22.3■■□□□ 1.16
PTPN7-203ENST00000435759 MADDQ8WXG6 1647 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms