RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 IGF1RP08069 1367 aa22.85■■□□□ 1.25
CDCA4P4-201ENST00000435216 CUL7Q14999 1698 aa22.81■■□□□ 1.24
CDCA4P4-201ENST00000435216 KIAA0586Q9BVV6 1533 aa22.73■■□□□ 1.23
CDCA4P4-201ENST00000435216 CARMIL1Q5VZK9 1371 aa22.7■■□□□ 1.22
CDCA4P4-201ENST00000435216 KIF13AQ9H1H9 1805 aa22.65■■□□□ 1.22
CDCA4P4-201ENST00000435216 ADCY10Q96PN6 1610 aa22.63■■□□□ 1.21
CDCA4P4-201ENST00000435216 TTBK1Q5TCY1 1321 aaPredicted RBP22.59■■□□□ 1.21
CDCA4P4-201ENST00000435216 NPM1P06748 294 aaKnown RBP eCLIP22.58■■□□□ 1.21
CDCA4P4-201ENST00000435216 IQGAP2Q13576 1575 aa22.55■■□□□ 1.2
CDCA4P4-201ENST00000435216 MAPKBP1O60336 1514 aa22.53■■□□□ 1.2
CDCA4P4-201ENST00000435216 PTPRGP23470 1445 aa22.52■■□□□ 1.2
CDCA4P4-201ENST00000435216 FAM69CQ0P6D2 419 aa22.52■■□□□ 1.2
CDCA4P4-201ENST00000435216 ABCC10Q5T3U5 1492 aa22.52■■□□□ 1.2
CDCA4P4-201ENST00000435216 RAPGEF2Q9Y4G8 1499 aa22.5■■□□□ 1.19
CDCA4P4-201ENST00000435216 DIP2BQ9P265 1576 aa22.5■■□□□ 1.19
CDCA4P4-201ENST00000435216 CARMIL2Q6F5E8 1435 aa22.49■■□□□ 1.19
CDCA4P4-201ENST00000435216 TNIKQ9UKE5 1360 aa22.48■■□□□ 1.19
CDCA4P4-201ENST00000435216 DISP1Q96F81 1524 aa22.45■■□□□ 1.18
CDCA4P4-201ENST00000435216 AEBP2Q6ZN18 517 aaPredicted RBP22.4■■□□□ 1.18
CDCA4P4-201ENST00000435216 ABCC2Q92887 1545 aa22.39■■□□□ 1.17
CDCA4P4-201ENST00000435216 UGGT2Q9NYU1 1516 aa22.39■■□□□ 1.17
CDCA4P4-201ENST00000435216 TSPOAP1O95153 1857 aa22.39■■□□□ 1.17
CDCA4P4-201ENST00000435216 KIAA0556O60303 1618 aa22.36■■□□□ 1.17
CDCA4P4-201ENST00000435216 CTTNBP2Q8WZ74 1663 aa22.36■■□□□ 1.17
CDCA4P4-201ENST00000435216 UACAQ9BZF9 1416 aa22.35■■□□□ 1.17
CDCA4P4-201ENST00000435216 UHRF1BP1LA0JNW5 1464 aa22.33■■□□□ 1.16
CDCA4P4-201ENST00000435216 ASXL2Q76L83 1435 aa22.32■■□□□ 1.16
CDCA4P4-201ENST00000435216 PRXQ9BXM0 1461 aa22.28■■□□□ 1.16
CDCA4P4-201ENST00000435216 KDM6BO15054 1643 aa22.28■■□□□ 1.16
CDCA4P4-201ENST00000435216 PLB1Q6P1J6 1458 aa22.27■■□□□ 1.16
CDCA4P4-201ENST00000435216 ZCCHC11Q5TAX3 1644 aaKnown RBP22.26■■□□□ 1.15
CDCA4P4-201ENST00000435216 KDM5BQ9UGL1 1544 aa22.25■■□□□ 1.15
CDCA4P4-201ENST00000435216 GLI2P10070 1586 aa22.21■■□□□ 1.15
CDCA4P4-201ENST00000435216 PPRC1Q5VV67 1664 aaKnown RBP22.21■■□□□ 1.15
CDCA4P4-201ENST00000435216 GOLGA3Q08378 1498 aa22.2■■□□□ 1.14
CDCA4P4-201ENST00000435216 EPRSP07814 1512 aaKnown RBP22.18■■□□□ 1.14
CDCA4P4-201ENST00000435216 ABCA8O94911 1581 aa22.14■■□□□ 1.13
CDCA4P4-201ENST00000435216 CSRNP3Q8WYN3 585 aa22.14■■□□□ 1.13
CDCA4P4-201ENST00000435216 MAP3K4Q9Y6R4 1608 aa22.13■■□□□ 1.13
CDCA4P4-201ENST00000435216 P3H3Q8IVL6 736 aa22.13■■□□□ 1.13
CDCA4P4-201ENST00000435216 WDR7Q9Y4E6 1490 aa22.11■■□□□ 1.13
CDCA4P4-201ENST00000435216 FAM9AQ8IZU1 332 aaPredicted RBP22.07■■□□□ 1.12
CDCA4P4-201ENST00000435216 ARID3CA6NKF2 412 aa22.06■■□□□ 1.12
CDCA4P4-201ENST00000435216 COL17A1Q9UMD9 1497 aaPredicted RBP22.06■■□□□ 1.12
CDCA4P4-201ENST00000435216 KCNH8Q96L42 1107 aa22.04■■□□□ 1.12
CDCA4P4-201ENST00000435216 KDM4FA0A1W2PPD8 638 aa22.03■■□□□ 1.12
CDCA4P4-201ENST00000435216 TEX14Q8IWB6 1497 aa22.03■■□□□ 1.12
CDCA4P4-201ENST00000435216 RANGAP1P46060 587 aaPredicted RBP22.02■■□□□ 1.12
CDCA4P4-201ENST00000435216 SAMD9Q5K651 1589 aa22.02■■□□□ 1.12
CDCA4P4-201ENST00000435216 EEA1Q15075 1411 aa22■■□□□ 1.11
CDCA4P4-201ENST00000435216 CFAP43Q8NDM7 1665 aa21.98■■□□□ 1.11
CDCA4P4-201ENST00000435216 CD109Q6YHK3 1445 aa21.97■■□□□ 1.11
CDCA4P4-201ENST00000435216 ATP10BO94823 1461 aa21.96■■□□□ 1.11
CDCA4P4-201ENST00000435216 RAPGEF6Q8TEU7 1601 aa21.93■■□□□ 1.1
CDCA4P4-201ENST00000435216 MAGI3Q5TCQ9 1506 aa21.92■■□□□ 1.1
CDCA4P4-201ENST00000435216 FHOD3Q2V2M9 1422 aa21.9■■□□□ 1.1
CDCA4P4-201ENST00000435216 EHMT2Q96KQ7 1210 aa21.9■■□□□ 1.1
CDCA4P4-201ENST00000435216 KIF21BO75037 1637 aa21.88■■□□□ 1.09
CDCA4P4-201ENST00000435216 ADGRL1O94910 1474 aa21.88■■□□□ 1.09
CDCA4P4-201ENST00000435216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.87■■□□□ 1.09
CDCA4P4-201ENST00000435216 HNRNPUL2Q1KMD3 747 aaKnown RBP21.87■■□□□ 1.09
CDCA4P4-201ENST00000435216 NUP153P49790 1475 aaKnown RBP21.84■■□□□ 1.09
CDCA4P4-201ENST00000435216 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.09
CDCA4P4-201ENST00000435216 ABCA9Q8IUA7 1624 aa21.82■■□□□ 1.08
CDCA4P4-201ENST00000435216 EFCAB5A4FU69 1503 aa21.78■■□□□ 1.08
CDCA4P4-201ENST00000435216 UBTFP17480 764 aaKnown RBP21.75■■□□□ 1.07
CDCA4P4-201ENST00000435216 ARAP3Q8WWN8 1544 aa21.75■■□□□ 1.07
CDCA4P4-201ENST00000435216 PLEKHD1A6NEE1 506 aa21.69■■□□□ 1.06
CDCA4P4-201ENST00000435216 RAPGEF3O95398 923 aa21.69■■□□□ 1.06
CDCA4P4-201ENST00000435216 CDK13Q14004 1512 aaKnown RBP21.69■■□□□ 1.06
CDCA4P4-201ENST00000435216 NEO1Q92859 1461 aa21.67■■□□□ 1.06
CDCA4P4-201ENST00000435216 PHLDB1Q86UU1 1377 aa21.65■■□□□ 1.06
CDCA4P4-201ENST00000435216 ARHGAP35Q9NRY4 1499 aa21.64■■□□□ 1.06
CDCA4P4-201ENST00000435216 ATP1B4Q9UN42 357 aaPredicted RBP21.64■■□□□ 1.05
CDCA4P4-201ENST00000435216 FRMPD1Q5SYB0 1578 aa21.64■■□□□ 1.05
CDCA4P4-201ENST00000435216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.64■■□□□ 1.05
CDCA4P4-201ENST00000435216 TTC37Q6PGP7 1564 aa21.63■■□□□ 1.05
CDCA4P4-201ENST00000435216 HECW1Q76N89 1606 aa21.58■■□□□ 1.05
CDCA4P4-201ENST00000435216 FMN1Q68DA7 1419 aa21.58■■□□□ 1.05
CDCA4P4-201ENST00000435216 FANCAO15360 1455 aa21.58■■□□□ 1.04
CDCA4P4-201ENST00000435216 AKNAQ7Z591 1439 aa21.56■■□□□ 1.04
CDCA4P4-201ENST00000435216 HECW2Q9P2P5 1572 aa21.56■■□□□ 1.04
CDCA4P4-201ENST00000435216 RICTORQ6R327 1708 aa21.55■■□□□ 1.04
CDCA4P4-201ENST00000435216 CFAP74Q9C0B2 1584 aa21.54■■□□□ 1.04
CDCA4P4-201ENST00000435216 DENND4BO75064 1496 aaPredicted RBP21.54■■□□□ 1.04
CDCA4P4-201ENST00000435216 LRRIQ1Q96JM4 1722 aa21.52■■□□□ 1.03
CDCA4P4-201ENST00000435216 ARID4BQ4LE39 1312 aaPredicted RBP21.5■■□□□ 1.03
CDCA4P4-201ENST00000435216 ADAMTSL3P82987 1691 aa21.5■■□□□ 1.03
CDCA4P4-201ENST00000435216 KIF14Q15058 1648 aa21.49■■□□□ 1.03
CDCA4P4-201ENST00000435216 ARHGEF40Q8TER5 1519 aa21.49■■□□□ 1.03
CDCA4P4-201ENST00000435216 BCORL1Q5H9F3 1711 aa21.47■■□□□ 1.03
CDCA4P4-201ENST00000435216 PLCH2O75038 1416 aa21.46■■□□□ 1.03
CDCA4P4-201ENST00000435216 MYO5CQ9NQX4 1742 aa21.46■■□□□ 1.03
CDCA4P4-201ENST00000435216 CDK11AQ9UQ88 783 aaPredicted RBP21.45■■□□□ 1.02
CDCA4P4-201ENST00000435216 PTPRMP28827 1452 aa21.45■■□□□ 1.02
CDCA4P4-201ENST00000435216 MADDQ8WXG6 1647 aa21.44■■□□□ 1.02
CDCA4P4-201ENST00000435216 PCF11O94913 1555 aaKnown RBP21.44■■□□□ 1.02
CDCA4P4-201ENST00000435216 SCAPERQ9BY12 1400 aa21.43■■□□□ 1.02
CDCA4P4-201ENST00000435216 YEATS2Q9ULM3 1422 aa21.43■■□□□ 1.02
CDCA4P4-201ENST00000435216 ZMYM4Q5VZL5 1548 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms