RNA–Protein interactions for RNA: ENST00000434585.5

RAB11FIP3-203, Transcript of RAB11 family interacting protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene RAB11FIP3, Length 3,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-203ENST00000434585 DHX57Q6P158 1386 aaKnown RBP17.44■□□□□ 0.38
RAB11FIP3-203ENST00000434585 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
RAB11FIP3-203ENST00000434585 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
RAB11FIP3-203ENST00000434585 RAB3GAP2Q9H2M9 1393 aa17.42■□□□□ 0.38
RAB11FIP3-203ENST00000434585 NESP48681 1621 aa17.4■□□□□ 0.38
RAB11FIP3-203ENST00000434585 SENP3-EIF4A1A0A087X0R7 540 aa17.39■□□□□ 0.37
RAB11FIP3-203ENST00000434585 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.37
RAB11FIP3-203ENST00000434585 TOP2BQ02880 1626 aa17.38■□□□□ 0.37
RAB11FIP3-203ENST00000434585 NEFLP07196 543 aa17.37■□□□□ 0.37
RAB11FIP3-203ENST00000434585 PRXQ9BXM0 1461 aa17.36■□□□□ 0.37
RAB11FIP3-203ENST00000434585 TONSLQ96HA7 1378 aa17.36■□□□□ 0.37
RAB11FIP3-203ENST00000434585 ANP32CO43423 234 aa17.34■□□□□ 0.37
RAB11FIP3-203ENST00000434585 FOXD1Q16676 465 aa17.34■□□□□ 0.37
RAB11FIP3-203ENST00000434585 CFTRP13569 1480 aa17.34■□□□□ 0.37
RAB11FIP3-203ENST00000434585 ARHGAP35Q9NRY4 1499 aa17.34■□□□□ 0.37
RAB11FIP3-203ENST00000434585 PEG3Q9GZU2 1588 aa17.34■□□□□ 0.37
RAB11FIP3-203ENST00000434585 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.37
RAB11FIP3-203ENST00000434585 PHLDB1Q86UU1 1377 aa17.3■□□□□ 0.36
RAB11FIP3-203ENST00000434585 FKBP8Q14318 412 aa17.28■□□□□ 0.36
RAB11FIP3-203ENST00000434585 IRX6P78412 446 aaPredicted RBP17.26■□□□□ 0.35
RAB11FIP3-203ENST00000434585 SETD5Q9C0A6 1442 aa17.26■□□□□ 0.35
RAB11FIP3-203ENST00000434585 FHAD1B1AJZ9 1412 aa17.22■□□□□ 0.35
RAB11FIP3-203ENST00000434585 CLSPNQ9HAW4 1339 aa17.2■□□□□ 0.34
RAB11FIP3-203ENST00000434585 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
RAB11FIP3-203ENST00000434585 CHMP7Q8WUX9 453 aaPredicted RBP17.19■□□□□ 0.34
RAB11FIP3-203ENST00000434585 HNRNPUQ00839 825 aaKnown RBP eCLIP17.19■□□□□ 0.34
RAB11FIP3-203ENST00000434585 HMGXB3Q12766 1538 aa17.18■□□□□ 0.34
RAB11FIP3-203ENST00000434585 FAM9BQ8IZU0 186 aa17.17■□□□□ 0.34
RAB11FIP3-203ENST00000434585 ERICH3Q5RHP9 1530 aa17.17■□□□□ 0.34
RAB11FIP3-203ENST00000434585 MYT1LQ9UL68 1186 aa17.17■□□□□ 0.34
RAB11FIP3-203ENST00000434585 SUPT16HQ9Y5B9 1047 aaKnown RBP17.14■□□□□ 0.33
RAB11FIP3-203ENST00000434585 SLC4A1APQ9BWU0 796 aaKnown RBP17.13■□□□□ 0.33
RAB11FIP3-203ENST00000434585 KDM2AQ9Y2K7 1162 aa17.13■□□□□ 0.33
RAB11FIP3-203ENST00000434585 LRRC9Q6ZRR7 1453 aa17.11■□□□□ 0.33
RAB11FIP3-203ENST00000434585 PPP1R15AO75807 674 aaPredicted RBP17.1■□□□□ 0.33
RAB11FIP3-203ENST00000434585 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
RAB11FIP3-203ENST00000434585 RRBP1Q9P2E9 1410 aaKnown RBP17.1■□□□□ 0.33
RAB11FIP3-203ENST00000434585 AQRO60306 1485 aaKnown RBP eCLIP17.08■□□□□ 0.321e-6■■□□□ 14.5
RAB11FIP3-203ENST00000434585 BIVM-ERCC5R4GMW8 1640 aa17.08■□□□□ 0.32
RAB11FIP3-203ENST00000434585 CDK11AQ9UQ88 783 aaPredicted RBP17.07■□□□□ 0.32
RAB11FIP3-203ENST00000434585 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.07■□□□□ 0.327e-8■■□□□ 12.5
RAB11FIP3-203ENST00000434585 ZNF644Q9H582 1327 aaPredicted RBP17.06■□□□□ 0.32
RAB11FIP3-203ENST00000434585 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
RAB11FIP3-203ENST00000434585 TOPBP1Q92547 1522 aa17.05■□□□□ 0.32
RAB11FIP3-203ENST00000434585 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
RAB11FIP3-203ENST00000434585 CFDP1Q9UEE9 299 aaPredicted RBP17.04■□□□□ 0.32
RAB11FIP3-203ENST00000434585 FMN1Q68DA7 1419 aa17.03■□□□□ 0.32
RAB11FIP3-203ENST00000434585 GAPVD1Q14C86 1478 aa17.02■□□□□ 0.32
RAB11FIP3-203ENST00000434585 EIF4G2P78344 907 aaKnown RBP eCLIP17.01■□□□□ 0.31
RAB11FIP3-203ENST00000434585 HSPA5P11021 654 aaKnown RBP17■□□□□ 0.31
RAB11FIP3-203ENST00000434585 MRS2Q9HD23 443 aa16.99■□□□□ 0.31
RAB11FIP3-203ENST00000434585 TIAM1Q13009 1591 aa16.98■□□□□ 0.31
RAB11FIP3-203ENST00000434585 RGL3Q3MIN7 710 aa16.98■□□□□ 0.31
RAB11FIP3-203ENST00000434585 MPHOSPH9Q99550 1183 aa16.98■□□□□ 0.31
RAB11FIP3-203ENST00000434585 L3MBTL2Q969R5 705 aa16.98■□□□□ 0.31
RAB11FIP3-203ENST00000434585 FGD6Q6ZV73 1430 aa16.96■□□□□ 0.31
RAB11FIP3-203ENST00000434585 PCF11O94913 1555 aaKnown RBP16.95■□□□□ 0.3
RAB11FIP3-203ENST00000434585 ERCC6Q03468 1493 aa16.95■□□□□ 0.3
RAB11FIP3-203ENST00000434585 WDR97A6NE52 1622 aa16.94■□□□□ 0.3
RAB11FIP3-203ENST00000434585 CCDC18Q5T9S5 1454 aa16.93■□□□□ 0.3
RAB11FIP3-203ENST00000434585 SENP3Q9H4L4 574 aaPredicted RBP16.93■□□□□ 0.3
RAB11FIP3-203ENST00000434585 ERICH6Q7L0X2 663 aa16.92■□□□□ 0.3
RAB11FIP3-203ENST00000434585 PLEKHD1A6NEE1 506 aa16.9■□□□□ 0.3
RAB11FIP3-203ENST00000434585 TSPY4P0CV99 314 aa16.89■□□□□ 0.3
RAB11FIP3-203ENST00000434585 TSPY10P0CW01 314 aa16.89■□□□□ 0.3
RAB11FIP3-203ENST00000434585 CASKIN1Q8WXD9 1431 aa16.89■□□□□ 0.29
RAB11FIP3-203ENST00000434585 URB2Q14146 1524 aaKnown RBP16.89■□□□□ 0.29
RAB11FIP3-203ENST00000434585 NCOA2Q15596 1464 aa16.88■□□□□ 0.29
RAB11FIP3-203ENST00000434585 PKD2Q13563 968 aa16.86■□□□□ 0.29
RAB11FIP3-203ENST00000434585 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
RAB11FIP3-203ENST00000434585 ABCA10Q8WWZ4 1543 aa16.84■□□□□ 0.29
RAB11FIP3-203ENST00000434585 PTPRKQ15262 1439 aa16.83■□□□□ 0.29
RAB11FIP3-203ENST00000434585 HNRNPMP52272 730 aaKnown RBP eCLIP16.83■□□□□ 0.287e-7■■■□□ 18
RAB11FIP3-203ENST00000434585 MYOM3Q5VTT5 1437 aa16.83■□□□□ 0.28
RAB11FIP3-203ENST00000434585 JPH4Q96JJ6 628 aa16.82■□□□□ 0.28
RAB11FIP3-203ENST00000434585 MAPKBP1O60336 1514 aa16.81■□□□□ 0.28
RAB11FIP3-203ENST00000434585 TIMELESSQ9UNS1 1208 aa16.81■□□□□ 0.28
RAB11FIP3-203ENST00000434585 FYCO1Q9BQS8 1478 aa16.81■□□□□ 0.28
RAB11FIP3-203ENST00000434585 CDK13Q14004 1512 aaKnown RBP16.8■□□□□ 0.28
RAB11FIP3-203ENST00000434585 CCDC184Q52MB2 194 aa16.8■□□□□ 0.28
RAB11FIP3-203ENST00000434585 DCAF11Q8TEB1 546 aa16.79■□□□□ 0.28
RAB11FIP3-203ENST00000434585 TSHZ2Q9NRE2 1034 aa16.79■□□□□ 0.28
RAB11FIP3-203ENST00000434585 CARD11Q9BXL7 1154 aa16.78■□□□□ 0.28
RAB11FIP3-203ENST00000434585 TMC1Q8TDI8 760 aa16.77■□□□□ 0.28
RAB11FIP3-203ENST00000434585 WASHC2AQ641Q2 1341 aa16.76■□□□□ 0.27
RAB11FIP3-203ENST00000434585 UACAQ9BZF9 1416 aa16.75■□□□□ 0.27
RAB11FIP3-203ENST00000434585 B4GALNT3Q6L9W6 998 aa16.74■□□□□ 0.27
RAB11FIP3-203ENST00000434585 NBPF8Q3BBV2 869 aa16.74■□□□□ 0.27
RAB11FIP3-203ENST00000434585 NAIPQ13075 1403 aa16.74■□□□□ 0.27
RAB11FIP3-203ENST00000434585 ZNF608Q9ULD9 1512 aaPredicted RBP16.74■□□□□ 0.27
RAB11FIP3-203ENST00000434585 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
RAB11FIP3-203ENST00000434585 CCER2I3L3R5 266 aa16.73■□□□□ 0.27
RAB11FIP3-203ENST00000434585 C11orf95C9JLR9 678 aaPredicted RBP16.73■□□□□ 0.27
RAB11FIP3-203ENST00000434585 NUP155O75694 1391 aa16.71■□□□□ 0.27
RAB11FIP3-203ENST00000434585 MYT1Q01538 1121 aa16.71■□□□□ 0.27
RAB11FIP3-203ENST00000434585 CHGAP10645 457 aaKnown RBP16.7■□□□□ 0.26
RAB11FIP3-203ENST00000434585 PRG4Q92954 1404 aaPredicted RBP16.7■□□□□ 0.26
RAB11FIP3-203ENST00000434585 HFM1A2PYH4 1435 aa16.68■□□□□ 0.26
RAB11FIP3-203ENST00000434585 EFCAB5A4FU69 1503 aa16.67■□□□□ 0.26
RAB11FIP3-203ENST00000434585 CC2D1BQ5T0F9 858 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms